RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 LOC107984640A0A0U1RRK4 108 aa11.74□□□□□ -0.53
NUCKS1-201ENST00000367142 ATP5EP2Q5VTU8 51 aa11.74□□□□□ -0.53
NUCKS1-201ENST00000367142 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
NUCKS1-201ENST00000367142 PKDREJQ9NTG1 2253 aa11.74□□□□□ -0.53
NUCKS1-201ENST00000367142 LINC00574Q9H8X3 128 aa11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 LINC00474Q9P2X8 69 aa11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 HELZP42694 1942 aaKnown RBP11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 CDKN2A-AS1Q9UH64 79 aa11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 ZNF407Q9C0G0 2248 aa11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 TCL1BO95988 128 aa11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 BBC3Q96PG8 261 aaPredicted RBP11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 TNRC6BQ9UPQ9 1833 aaKnown RBP11.73□□□□□ -0.53
NUCKS1-201ENST00000367142 PPDPFQ9H3Y8 114 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 NCOR1O75376 2440 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 TMEM223A0PJW6 202 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 BRK1Q8WUW1 75 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 SCXQ7RTU7 201 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 HEATR5AQ86XA9 2040 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 IGLV4-69A0A075B6H9 119 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 KPRPQ5T749 579 aaPredicted RBP11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 DOCK10Q96BY6 2186 aa11.72□□□□□ -0.53
NUCKS1-201ENST00000367142 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
NUCKS1-201ENST00000367142 WISP2O76076 250 aa11.71□□□□□ -0.53
NUCKS1-201ENST00000367142 PSMG3-AS1Q96PY0 264 aa11.71□□□□□ -0.53
NUCKS1-201ENST00000367142 IGLC6P0CF74 106 aa11.71□□□□□ -0.53
NUCKS1-201ENST00000367142 UBE2D2P62837 147 aa11.71□□□□□ -0.54
NUCKS1-201ENST00000367142 CDPF1Q6NVV7 123 aa11.71□□□□□ -0.54
NUCKS1-201ENST00000367142 C1orf158Q8N1D5 194 aa11.71□□□□□ -0.54
NUCKS1-201ENST00000367142 NLRC5Q86WI3 1866 aa11.71□□□□□ -0.54
NUCKS1-201ENST00000367142 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 IGKV2-28A0A075B6P5 120 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 M0R378 163 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 IGKV2D-28P01615 120 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 RLFQ13129 1914 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 SERP1Q9Y6X1 66 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 SLPIP03973 132 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 DCANP1Q8TF63 244 aa11.7□□□□□ -0.54
NUCKS1-201ENST00000367142 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
NUCKS1-201ENST00000367142 ABCA1O95477 2261 aa11.69□□□□□ -0.54
NUCKS1-201ENST00000367142 CCKP06307 115 aa11.69□□□□□ -0.54
NUCKS1-201ENST00000367142 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
NUCKS1-201ENST00000367142 LELP1Q5T871 98 aa11.69□□□□□ -0.54
NUCKS1-201ENST00000367142 LINC00308Q8TCZ7 52 aa11.69□□□□□ -0.54
NUCKS1-201ENST00000367142 LYPD6Q86Y78 171 aa11.69□□□□□ -0.54
NUCKS1-201ENST00000367142 PLAC8L1A1L4L8 177 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 CD164L2Q6UWJ8 174 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 PLA2G2EQ9NZK7 142 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 EBI3Q14213 229 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 ENHOQ6UWT2 76 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 Q8N976 141 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 DOCK9Q9BZ29 2069 aa11.68□□□□□ -0.54
NUCKS1-201ENST00000367142 A0A1B0GXF2 115 aa11.67□□□□□ -0.54
NUCKS1-201ENST00000367142 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
NUCKS1-201ENST00000367142 SDIM1Q6ZPB5 146 aa11.67□□□□□ -0.54
NUCKS1-201ENST00000367142 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
NUCKS1-201ENST00000367142 PTH2Q96A98 100 aa11.67□□□□□ -0.54
NUCKS1-201ENST00000367142 M0QY20 66 aa11.67□□□□□ -0.54
NUCKS1-201ENST00000367142 C6orf99Q4VX62 202 aa11.67□□□□□ -0.54
NUCKS1-201ENST00000367142 RBX1P62877 108 aa11.66□□□□□ -0.54
NUCKS1-201ENST00000367142 MALRD1Q5VYJ5 2156 aa11.66□□□□□ -0.54
NUCKS1-201ENST00000367142 IGLV9-49A0A0B4J1Y8 123 aa11.66□□□□□ -0.54
NUCKS1-201ENST00000367142 NUPR2A6NF83 97 aa11.66□□□□□ -0.54
NUCKS1-201ENST00000367142 PIK3CD-AS1Q5SR53 167 aa11.66□□□□□ -0.54
NUCKS1-201ENST00000367142 C11orf71Q6IPW1 123 aa11.66□□□□□ -0.54
NUCKS1-201ENST00000367142 ROS1P08922 2347 aa11.66□□□□□ -0.54
NUCKS1-201ENST00000367142 A0A0J9YWU9 116 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 ZFAND3Q9H8U3 227 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 C20orf197Q8N268 126 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 CLUHP3Q96NS8 147 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 C3orf84H3BNL1 204 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 FAM236DA0A1B0GTK5 79 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 FAM236CP0DP71 79 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 MPLKIPQ8TAP9 179 aa11.65□□□□□ -0.54
NUCKS1-201ENST00000367142 P0C879 139 aa11.64□□□□□ -0.55
NUCKS1-201ENST00000367142 C10orf99Q6UWK7 81 aa11.64□□□□□ -0.55
NUCKS1-201ENST00000367142 TNRC6AQ8NDV7 1962 aaKnown RBP11.64□□□□□ -0.55
NUCKS1-201ENST00000367142 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
NUCKS1-201ENST00000367142 V9GYY9 64 aa11.63□□□□□ -0.55
NUCKS1-201ENST00000367142 FRMD6-AS1P0C7T7 363 aa11.63□□□□□ -0.55
NUCKS1-201ENST00000367142 Q8N9L7 120 aa11.62□□□□□ -0.55
NUCKS1-201ENST00000367142 NANOS2P60321 138 aaKnown RBP11.62□□□□□ -0.55
NUCKS1-201ENST00000367142 PROK1P58294 105 aa11.62□□□□□ -0.55
NUCKS1-201ENST00000367142 MRPL55Q7Z7F7 128 aaKnown RBP11.62□□□□□ -0.55
NUCKS1-201ENST00000367142 WFDC13Q8IUB5 93 aa11.62□□□□□ -0.55
NUCKS1-201ENST00000367142 WNK2Q9Y3S1 2297 aa11.62□□□□□ -0.55
NUCKS1-201ENST00000367142 G3V4G9 280 aa11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 IGLV2-8P01709 118 aa11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 C11orf1Q9H5F2 150 aa11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 RPL37AP8A6NKH3 93 aa11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 PLA2G2AP14555 144 aa11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 MLST8Q9BVC4 326 aa11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 RIF1Q5UIP0 2472 aaKnown RBP11.61□□□□□ -0.55
NUCKS1-201ENST00000367142 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
NUCKS1-201ENST00000367142 NDUFC2-KCTD14E9PQ53 114 aa11.6□□□□□ -0.55
NUCKS1-201ENST00000367142 GPR179Q6PRD1 2367 aa11.59□□□□□ -0.55
NUCKS1-201ENST00000367142 LINC00959A0A1B0GUT2 108 aa11.59□□□□□ -0.55
NUCKS1-201ENST00000367142 FAM240AA0A1B0GVK7 77 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms