RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 VPREB3Q9UKI3 123 aa13.42□□□□□ -0.26
SMG5-201ENST00000361813 MRPL23Q16540 153 aaKnown RBP13.41□□□□□ -0.26
SMG5-201ENST00000361813 TRAV4A0A0B4J268 109 aa13.41□□□□□ -0.26
SMG5-201ENST00000361813 CDKN2A-AS1Q9UH64 79 aa13.41□□□□□ -0.26
SMG5-201ENST00000361813 LECT2O14960 151 aa13.4□□□□□ -0.26
SMG5-201ENST00000361813 LMO4P61968 165 aa13.4□□□□□ -0.26
SMG5-201ENST00000361813 RPL32P62910 135 aaKnown RBP13.4□□□□□ -0.26
SMG5-201ENST00000361813 ATOX1O00244 68 aa13.4□□□□□ -0.26
SMG5-201ENST00000361813 RNASE3P12724 160 aaKnown RBP13.4□□□□□ -0.26
SMG5-201ENST00000361813 H0YGX0 51 aa13.4□□□□□ -0.26
SMG5-201ENST00000361813 FBXL19-AS1Q494R0 122 aa13.39□□□□□ -0.27
SMG5-201ENST00000361813 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
SMG5-201ENST00000361813 M0QY20 66 aa13.39□□□□□ -0.27
SMG5-201ENST00000361813 RBMY1FQ15415 496 aaKnown RBP13.39□□□□□ -0.27
SMG5-201ENST00000361813 MIR7-3HGQ8N6C7 128 aa13.39□□□□□ -0.27
SMG5-201ENST00000361813 A8MZ25 164 aa13.39□□□□□ -0.27
SMG5-201ENST00000361813 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
SMG5-201ENST00000361813 ANGP03950 147 aaKnown RBP13.38□□□□□ -0.27
SMG5-201ENST00000361813 LINC00643Q86TS7 51 aa13.38□□□□□ -0.27
SMG5-201ENST00000361813 COX7B2Q8TF08 81 aa13.38□□□□□ -0.27
SMG5-201ENST00000361813 DSCR8Q96T75 97 aa13.37□□□□□ -0.27
SMG5-201ENST00000361813 ZMAT4Q9H898 229 aa13.37□□□□□ -0.27
SMG5-201ENST00000361813 TRBV27A0A0K0K1C4 114 aa13.37□□□□□ -0.27
SMG5-201ENST00000361813 K7EQD1 137 aa13.37□□□□□ -0.27
SMG5-201ENST00000361813 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
SMG5-201ENST00000361813 F5H768 121 aa13.36□□□□□ -0.27
SMG5-201ENST00000361813 DAZ2Q13117 558 aaKnown RBP13.36□□□□□ -0.27
SMG5-201ENST00000361813 HIST2H2BCQ6DN03 193 aa13.36□□□□□ -0.27
SMG5-201ENST00000361813 DAZ4Q86SG3 579 aaKnown RBP13.36□□□□□ -0.27
SMG5-201ENST00000361813 C10orf105Q8TEF2 133 aa13.36□□□□□ -0.27
SMG5-201ENST00000361813 DAZ3Q9NR90 486 aaKnown RBP13.36□□□□□ -0.27
SMG5-201ENST00000361813 IGHV4-4A0A075B6R2 117 aa13.35□□□□□ -0.27
SMG5-201ENST00000361813 TRBV30A0A0K0K1B3 111 aa13.35□□□□□ -0.27
SMG5-201ENST00000361813 CHD7Q9P2D1 2997 aa13.35□□□□□ -0.27
SMG5-201ENST00000361813 POLR2KP53803 58 aaKnown RBP13.35□□□□□ -0.27
SMG5-201ENST00000361813 J3QLI3 93 aa13.35□□□□□ -0.27
SMG5-201ENST00000361813 TNFRSF13BO14836 293 aaPredicted RBP13.35□□□□□ -0.27
SMG5-201ENST00000361813 COX7A2LO14548 114 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 PROK1P58294 105 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 Q8N6K4 173 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 LINC00467Q9BRT7 94 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 C14orf132Q9NPU4 83 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 CLPSL1A2RUU4 121 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 A6NDX4 124 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 NRGNQ92686 78 aa13.34□□□□□ -0.27
SMG5-201ENST00000361813 TRAV25A0A0B4J276 109 aa13.33□□□□□ -0.28
SMG5-201ENST00000361813 ATP5G1P05496 136 aa13.33□□□□□ -0.28
SMG5-201ENST00000361813 RNF152Q8N8N0 203 aa13.33□□□□□ -0.28
SMG5-201ENST00000361813 J3KT08 172 aa13.33□□□□□ -0.28
SMG5-201ENST00000361813 IGLV10-54A0A075B6I4 117 aa13.32□□□□□ -0.28
SMG5-201ENST00000361813 PIEZO1Q92508 2521 aa13.32□□□□□ -0.28
SMG5-201ENST00000361813 CCDC179H3BU77 68 aa13.32□□□□□ -0.28
SMG5-201ENST00000361813 Q96MF0 132 aa13.32□□□□□ -0.28
SMG5-201ENST00000361813 ZNF561-AS1K7EIQ3 104 aa13.32□□□□□ -0.28
SMG5-201ENST00000361813 UBE2D1P51668 147 aa13.32□□□□□ -0.28
SMG5-201ENST00000361813 DAD1P61803 113 aa13.32□□□□□ -0.28
SMG5-201ENST00000361813 K7EQG2 157 aa13.31□□□□□ -0.28
SMG5-201ENST00000361813 F8W735 103 aaPredicted RBP13.3□□□□□ -0.28
SMG5-201ENST00000361813 HIVEP2P31629 2446 aa13.3□□□□□ -0.28
SMG5-201ENST00000361813 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
SMG5-201ENST00000361813 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
SMG5-201ENST00000361813 CCL24O00175 119 aa13.3□□□□□ -0.28
SMG5-201ENST00000361813 PRB1P04280 392 aa13.3□□□□□ -0.28
SMG5-201ENST00000361813 RBM3P98179 157 aaKnown RBP13.3□□□□□ -0.28
SMG5-201ENST00000361813 IGIPA6NJ69 53 aa13.29□□□□□ -0.28
SMG5-201ENST00000361813 NBL1P41271 181 aa13.29□□□□□ -0.28
SMG5-201ENST00000361813 HIST2H2BDQ6DRA6 164 aa13.29□□□□□ -0.28
SMG5-201ENST00000361813 TSHBP01222 138 aa13.29□□□□□ -0.28
SMG5-201ENST00000361813 CRIP2P52943 208 aaPredicted RBP13.29□□□□□ -0.28
SMG5-201ENST00000361813 MRGPRG-AS1Q2M3A8 158 aa13.29□□□□□ -0.28
SMG5-201ENST00000361813 PIK3CD-AS1Q5SR53 167 aa13.29□□□□□ -0.28
SMG5-201ENST00000361813 SPANXCQ9NY87 97 aa13.29□□□□□ -0.28
SMG5-201ENST00000361813 SDIM1Q6ZPB5 146 aa13.28□□□□□ -0.28
SMG5-201ENST00000361813 TMEM263Q8WUH6 116 aaKnown RBP13.28□□□□□ -0.28
SMG5-201ENST00000361813 IGLV2-18A0A075B6J9 118 aa13.27□□□□□ -0.28
SMG5-201ENST00000361813 GYPEP15421 78 aa13.27□□□□□ -0.28
SMG5-201ENST00000361813 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.29
SMG5-201ENST00000361813 COX8CQ7Z4L0 72 aa13.27□□□□□ -0.29
SMG5-201ENST00000361813 FN1P02751 2386 aaKnown RBP13.26□□□□□ -0.29
SMG5-201ENST00000361813 CRYGDP07320 174 aa13.26□□□□□ -0.29
SMG5-201ENST00000361813 ODF3Q96PU9 254 aa13.26□□□□□ -0.29
SMG5-201ENST00000361813 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
SMG5-201ENST00000361813 TSPEAR-AS2P59090 65 aa13.26□□□□□ -0.29
SMG5-201ENST00000361813 UQCRQO14949 82 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 UBE2D3P61077 147 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 UBE2D2P62837 147 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 HTTP42858 3142 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 KLLNB2CW77 178 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 PSMG3-AS1Q96PY0 264 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 PRM2P04554 102 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 ESM1Q9NQ30 184 aa13.25□□□□□ -0.29
SMG5-201ENST00000361813 Q6ZTI0 123 aa13.24□□□□□ -0.29
SMG5-201ENST00000361813 ADAMTS20P59510 1910 aa13.24□□□□□ -0.29
SMG5-201ENST00000361813 IGLV4-69A0A075B6H9 119 aa13.24□□□□□ -0.29
SMG5-201ENST00000361813 LST1O00453 97 aa13.24□□□□□ -0.29
SMG5-201ENST00000361813 H7C423 109 aa13.23□□□□□ -0.29
SMG5-201ENST00000361813 ABCA12Q86UK0 2595 aa13.23□□□□□ -0.29
SMG5-201ENST00000361813 MAP6D1Q9H9H5 199 aa13.23□□□□□ -0.29
SMG5-201ENST00000361813 C16orf74Q96GX8 76 aa13.23□□□□□ -0.29
SMG5-201ENST00000361813 PSMB8P28062 276 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms