RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 IGKV3OR2-268A0A0C4DH90 116 aa13.26□□□□□ -0.29
CD47-202ENST00000361309 RPS10P46783 165 aaKnown RBP13.26□□□□□ -0.29
CD47-202ENST00000361309 AMTP48728 403 aa13.26□□□□□ -0.29
CD47-202ENST00000361309 RPS20P60866 119 aaKnown RBP13.26□□□□□ -0.29
CD47-202ENST00000361309 HIGD2BQ4VC39 106 aa13.26□□□□□ -0.29
CD47-202ENST00000361309 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
CD47-202ENST00000361309 SMLR1H3BR10 107 aa13.25□□□□□ -0.29
CD47-202ENST00000361309 NDUFS6O75380 124 aaKnown RBP13.25□□□□□ -0.29
CD47-202ENST00000361309 H2AFB1P0C5Y9 115 aa13.25□□□□□ -0.29
CD47-202ENST00000361309 PRR3P79522 188 aaKnown RBP13.25□□□□□ -0.29
CD47-202ENST00000361309 COTL1Q14019 142 aa13.25□□□□□ -0.29
CD47-202ENST00000361309 CENPWQ5EE01 88 aa13.24□□□□□ -0.29
CD47-202ENST00000361309 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
CD47-202ENST00000361309 TRGC1P0CF51 173 aa13.23□□□□□ -0.29
CD47-202ENST00000361309 STPG4Q8N801 248 aa13.23□□□□□ -0.29
CD47-202ENST00000361309 LYPD6BQ8NI32 183 aa13.23□□□□□ -0.29
CD47-202ENST00000361309 C11orf52Q96A22 123 aa13.23□□□□□ -0.29
CD47-202ENST00000361309 F2Z2F3 143 aa13.22□□□□□ -0.29
CD47-202ENST00000361309 LYZL1Q6UWQ5 148 aa13.22□□□□□ -0.29
CD47-202ENST00000361309 NTF3P20783 257 aa13.21□□□□□ -0.29
CD47-202ENST00000361309 CCL20P78556 96 aa13.21□□□□□ -0.29
CD47-202ENST00000361309 ZNF345Q14585 488 aa13.21□□□□□ -0.29
CD47-202ENST00000361309 GNG13Q9P2W3 67 aa13.21□□□□□ -0.29
CD47-202ENST00000361309 XKRY2A2RUG3 117 aa13.2□□□□□ -0.3
CD47-202ENST00000361309 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
CD47-202ENST00000361309 MANBALQ9NQG1 85 aa13.2□□□□□ -0.3
CD47-202ENST00000361309 A0A0J9YXV3 536 aa13.19□□□□□ -0.3
CD47-202ENST00000361309 RAB19A4D1S5 217 aa13.19□□□□□ -0.3
CD47-202ENST00000361309 A0A096LNI7 61 aa13.18□□□□□ -0.3
CD47-202ENST00000361309 GVQW2A0A096LPI5 108 aaPredicted RBP13.18□□□□□ -0.3
CD47-202ENST00000361309 IFNA1P01562 189 aa13.18□□□□□ -0.3
CD47-202ENST00000361309 GNG4P50150 75 aa13.17□□□□□ -0.3
CD47-202ENST00000361309 KRTAP10-8P60410 259 aa13.17□□□□□ -0.3
CD47-202ENST00000361309 AMMECR1LQ6DCA0 310 aa13.17□□□□□ -0.3
CD47-202ENST00000361309 BCL2L11O43521 198 aa13.16□□□□□ -0.3
CD47-202ENST00000361309 SPINK6Q6UWN8 80 aa13.16□□□□□ -0.3
CD47-202ENST00000361309 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
CD47-202ENST00000361309 GATD1Q8NB37 220 aa13.16□□□□□ -0.3
CD47-202ENST00000361309 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
CD47-202ENST00000361309 TRAV26-2A0A0B4J265 109 aa13.15□□□□□ -0.3
CD47-202ENST00000361309 KANTRA0A1W2PQU2 76 aa13.15□□□□□ -0.3
CD47-202ENST00000361309 RNASEKQ6P5S7 137 aaKnown RBP13.15□□□□□ -0.3
CD47-202ENST00000361309 Q6ZNX1 250 aa13.15□□□□□ -0.3
CD47-202ENST00000361309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
CD47-202ENST00000361309 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
CD47-202ENST00000361309 CTRLP40313 264 aa13.14□□□□□ -0.31
CD47-202ENST00000361309 FOXI1Q12951 378 aa13.14□□□□□ -0.31
CD47-202ENST00000361309 TWIST1Q15672 202 aa13.14□□□□□ -0.31
CD47-202ENST00000361309 REG3GQ6UW15 175 aa13.14□□□□□ -0.31
CD47-202ENST00000361309 BATF3Q9NR55 127 aa13.14□□□□□ -0.31
CD47-202ENST00000361309 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
CD47-202ENST00000361309 HMSDA8MTL9 139 aa13.13□□□□□ -0.31
CD47-202ENST00000361309 NCR2O95944 276 aa13.12□□□□□ -0.31
CD47-202ENST00000361309 FGF6P10767 208 aa13.12□□□□□ -0.31
CD47-202ENST00000361309 RPL39LQ96EH5 51 aaKnown RBP13.12□□□□□ -0.31
CD47-202ENST00000361309 LINC00474Q9P2X8 69 aa13.12□□□□□ -0.31
CD47-202ENST00000361309 TRAV1-1A0A0B4J248 108 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 H7C423 109 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 APCSP02743 223 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 EIF5AP63241 154 aaKnown RBP13.11□□□□□ -0.31
CD47-202ENST00000361309 NUDT10Q8NFP7 164 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 NUDT11Q96G61 164 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 CNFNQ9BYD5 112 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 BIN3Q9NQY0 253 aa13.11□□□□□ -0.31
CD47-202ENST00000361309 XCL1P47992 114 aa13.1□□□□□ -0.31
CD47-202ENST00000361309 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
CD47-202ENST00000361309 OR5A1Q8NGJ0 315 aa13.1□□□□□ -0.31
CD47-202ENST00000361309 MED9Q9NWA0 146 aa13.1□□□□□ -0.31
CD47-202ENST00000361309 PDE6DO43924 150 aa13.09□□□□□ -0.31
CD47-202ENST00000361309 MEF2BQ02080 365 aaPredicted RBP13.09□□□□□ -0.31
CD47-202ENST00000361309 RGS21Q2M5E4 152 aa13.09□□□□□ -0.31
CD47-202ENST00000361309 Q6ZRP5 223 aa13.09□□□□□ -0.31
CD47-202ENST00000361309 CARD19Q96LW7 228 aa13.08□□□□□ -0.32
CD47-202ENST00000361309 PKIGQ9Y2B9 76 aa13.08□□□□□ -0.32
CD47-202ENST00000361309 IGHV1-58A0A0C4DH39 117 aa13.07□□□□□ -0.32
CD47-202ENST00000361309 CCL25O15444 150 aa13.07□□□□□ -0.32
CD47-202ENST00000361309 FOXA3P55318 350 aaPredicted RBP13.07□□□□□ -0.32
CD47-202ENST00000361309 LINC00959A0A1B0GUT2 108 aa13.06□□□□□ -0.32
CD47-202ENST00000361309 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
CD47-202ENST00000361309 TEX46H3BTG2 121 aa13.06□□□□□ -0.32
CD47-202ENST00000361309 ZNF25P17030 456 aaPredicted RBP13.06□□□□□ -0.32
CD47-202ENST00000361309 RNASE7Q9H1E1 156 aaKnown RBP13.06□□□□□ -0.32
CD47-202ENST00000361309 RPP21Q9H633 154 aaKnown RBP13.06□□□□□ -0.32
CD47-202ENST00000361309 TMEM101Q96IK0 257 aa13.05□□□□□ -0.32
CD47-202ENST00000361309 BTF3L4Q96K17 158 aa13.05□□□□□ -0.32
CD47-202ENST00000361309 FAM231BA6NCW3 169 aa13.04□□□□□ -0.32
CD47-202ENST00000361309 GAS8-AS1O95177 125 aa13.04□□□□□ -0.32
CD47-202ENST00000361309 SMIM15Q7Z3B0 74 aa13.04□□□□□ -0.32
CD47-202ENST00000361309 PMCHP20382 165 aa13.03□□□□□ -0.32
CD47-202ENST00000361309 SYCNQ0VAF6 134 aa13.03□□□□□ -0.32
CD47-202ENST00000361309 TEX261Q6UWH6 196 aa13.03□□□□□ -0.32
CD47-202ENST00000361309 I3L3M4 83 aa13.02□□□□□ -0.33
CD47-202ENST00000361309 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.33
CD47-202ENST00000361309 K7EN84 100 aa13.02□□□□□ -0.33
CD47-202ENST00000361309 BCL2P10415 239 aa13.02□□□□□ -0.33
CD47-202ENST00000361309 LPAP08519 4548 aa13.02□□□□□ -0.33
CD47-202ENST00000361309 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
CD47-202ENST00000361309 SS18Q15532 418 aa13.01□□□□□ -0.33
CD47-202ENST00000361309 ESDP10768 282 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms