RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
SQSTM1-201ENST00000360718 A0A1B0GWB2 263 aa9.61□□□□□ -0.87
SQSTM1-201ENST00000360718 POLR2KP53803 58 aaKnown RBP9.61□□□□□ -0.87
SQSTM1-201ENST00000360718 TRPT1Q86TN4 253 aaKnown RBP9.61□□□□□ -0.87
SQSTM1-201ENST00000360718 C19orf73Q9NVV2 129 aa9.61□□□□□ -0.87
SQSTM1-201ENST00000360718 F5H697 171 aa9.6□□□□□ -0.87
SQSTM1-201ENST00000360718 J3QR89 54 aa9.6□□□□□ -0.87
SQSTM1-201ENST00000360718 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
SQSTM1-201ENST00000360718 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
SQSTM1-201ENST00000360718 SYT8Q8NBV8 401 aa9.6□□□□□ -0.87
SQSTM1-201ENST00000360718 IGHV1OR15-1A0A075B7D0 117 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 INSP01308 110 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 PMVKQ15126 192 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 SUMO4Q6EEV6 95 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 TP53TG1Q9Y2A0 90 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
SQSTM1-201ENST00000360718 TRBV6-5A0A0K0K1A5 114 aa9.58□□□□□ -0.88
SQSTM1-201ENST00000360718 MUC4Q99102 2169 aa9.58□□□□□ -0.88
SQSTM1-201ENST00000360718 CMYA5Q8N3K9 4069 aa9.58□□□□□ -0.88
SQSTM1-201ENST00000360718 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
SQSTM1-201ENST00000360718 SRSF9Q13242 221 aaKnown RBP eCLIP9.58□□□□□ -0.88
SQSTM1-201ENST00000360718 TRGV11A0A075B6L2 103 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 CRYGDP07320 174 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 RBMY1A1P0DJD3 496 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 RBMY1CP0DJD4 496 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 RBMY1FQ15415 496 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 XCL2Q9UBD3 114 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 A0A087WWL8 130 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 TRBV27A0A0K0K1C4 114 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 SDHAF1A6NFY7 115 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 C9orf85Q96MD7 179 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 C1QTNF4Q9BXJ3 329 aa9.57□□□□□ -0.88
SQSTM1-201ENST00000360718 IGHV3-16A0A0C4DH30 117 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 TEX48A0A1B0GUV7 120 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 WIPF1O43516 503 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 RPL35AP18077 110 aaKnown RBP9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 MORN3Q6PF18 240 aaPredicted RBP9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 Q8N1Y9 231 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 LINC01587Q99440 93 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 SIGMAR1Q99720 223 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 JPT2Q9H910 190 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 C11orf86A6NJI1 115 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 HTN1P15515 57 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 MDFIQ99750 246 aa9.56□□□□□ -0.88
SQSTM1-201ENST00000360718 ANK2Q01484 3957 aa9.55□□□□□ -0.88
SQSTM1-201ENST00000360718 IGLV4-69A0A075B6H9 119 aa9.55□□□□□ -0.88
SQSTM1-201ENST00000360718 H3BMG7 143 aa9.55□□□□□ -0.88
SQSTM1-201ENST00000360718 TSHBP01222 138 aa9.55□□□□□ -0.88
SQSTM1-201ENST00000360718 RHOHQ15669 191 aa9.54□□□□□ -0.88
SQSTM1-201ENST00000360718 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
SQSTM1-201ENST00000360718 WFDC2Q14508 124 aa9.54□□□□□ -0.88
SQSTM1-201ENST00000360718 ZNF56Q15929 161 aa9.54□□□□□ -0.88
SQSTM1-201ENST00000360718 FAM74A4Q5TZK3 123 aa9.54□□□□□ -0.88
SQSTM1-201ENST00000360718 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
SQSTM1-201ENST00000360718 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 TMEM170BQ5T4T1 132 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 LINC00467Q9BRT7 94 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 SPANXB1Q9NS25 103 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 PRM2P04554 102 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 RPL39P62891 51 aaKnown RBP9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 ZNF876PQ49A33 203 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
SQSTM1-201ENST00000360718 IGHV3OR16-12A0A075B7B8 117 aa9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 M0QY20 66 aa9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 UBE2D1P51668 147 aa9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 ZNF415Q09FC8 603 aa9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 A0A0J9YY99 117 aa9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 SPATA25Q9BR10 227 aa9.52□□□□□ -0.89
SQSTM1-201ENST00000360718 AZU1P20160 251 aa9.51□□□□□ -0.89
SQSTM1-201ENST00000360718 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
SQSTM1-201ENST00000360718 EMP1P54849 157 aa9.51□□□□□ -0.89
SQSTM1-201ENST00000360718 NFE4Q86UQ8 179 aa9.51□□□□□ -0.89
SQSTM1-201ENST00000360718 C1orf158Q8N1D5 194 aa9.51□□□□□ -0.89
SQSTM1-201ENST00000360718 I3L3M4 83 aa9.5□□□□□ -0.89
SQSTM1-201ENST00000360718 ETDBQ3ZM63 59 aa9.49□□□□□ -0.89
SQSTM1-201ENST00000360718 SLC25A29Q8N8R3 303 aa9.49□□□□□ -0.89
SQSTM1-201ENST00000360718 A0A1B0GV72 72 aa9.49□□□□□ -0.89
SQSTM1-201ENST00000360718 J3QQQ9 107 aa9.49□□□□□ -0.89
SQSTM1-201ENST00000360718 ZNRF2Q8NHG8 242 aa9.49□□□□□ -0.89
SQSTM1-201ENST00000360718 SPXQ9BT56 116 aa9.49□□□□□ -0.89
SQSTM1-201ENST00000360718 PRO0461Q9UI25 63 aa9.49□□□□□ -0.89
SQSTM1-201ENST00000360718 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 APOMO95445 188 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 NOTCH1P46531 2555 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 M0R2P5 195 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 LEPROTO15243 131 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 TSPAN13O95857 204 aa9.48□□□□□ -0.89
SQSTM1-201ENST00000360718 APOC4P55056 127 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms