RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 C3orf79P0CE67 100 aa9.79□□□□□ -0.84
PDLIM5-203ENST00000359265 PYY3Q5JQD4 70 aa9.79□□□□□ -0.84
PDLIM5-203ENST00000359265 SLC25A29Q8N8R3 303 aa9.79□□□□□ -0.84
PDLIM5-203ENST00000359265 CELA1Q9UNI1 258 aa9.79□□□□□ -0.84
PDLIM5-203ENST00000359265 LYSTQ99698 3801 aa9.79□□□□□ -0.84
PDLIM5-203ENST00000359265 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
PDLIM5-203ENST00000359265 TSHBP01222 138 aa9.78□□□□□ -0.84
PDLIM5-203ENST00000359265 LINC00173Q6ZV60 143 aa9.78□□□□□ -0.84
PDLIM5-203ENST00000359265 ZNRF2Q8NHG8 242 aa9.78□□□□□ -0.84
PDLIM5-203ENST00000359265 MAP1LC3CQ9BXW4 147 aa9.78□□□□□ -0.84
PDLIM5-203ENST00000359265 RYR1P21817 5038 aa9.78□□□□□ -0.84
PDLIM5-203ENST00000359265 ATP5LO75964 103 aa9.77□□□□□ -0.85
PDLIM5-203ENST00000359265 ATP5G1P05496 136 aa9.77□□□□□ -0.85
PDLIM5-203ENST00000359265 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-203ENST00000359265 IFI27L1Q96BM0 104 aa9.77□□□□□ -0.85
PDLIM5-203ENST00000359265 CYSLTR1Q9Y271 337 aa9.77□□□□□ -0.85
PDLIM5-203ENST00000359265 C20orf202A1L168 122 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 SCGB1D1O95968 90 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 GAGE1Q13065 139 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 GAGE4Q13068 117 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 GAGE5Q13069 117 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 COTL1Q14019 142 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 GAGE13Q4V321 117 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 C2orf66Q6UXQ4 117 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 LINC00518Q8N0U6 118 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 C12orf57Q99622 126 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 Q9UF83 564 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 PRO0255Q9UI72 69 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 HHLA3Q9XRX5 114 aa9.76□□□□□ -0.85
PDLIM5-203ENST00000359265 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
PDLIM5-203ENST00000359265 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
PDLIM5-203ENST00000359265 UBE2D3P61077 147 aa9.75□□□□□ -0.85
PDLIM5-203ENST00000359265 UBE2D2P62837 147 aa9.75□□□□□ -0.85
PDLIM5-203ENST00000359265 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
PDLIM5-203ENST00000359265 PHLDA1Q8WV24 401 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-203ENST00000359265 LCE6AA0A183 80 aa9.74□□□□□ -0.85
PDLIM5-203ENST00000359265 NHLRC4P0CG21 123 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-203ENST00000359265 CRYBA4P53673 196 aa9.74□□□□□ -0.85
PDLIM5-203ENST00000359265 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
PDLIM5-203ENST00000359265 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 LOC100131303A0A0U1RQF7 123 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 PAX4O43316 350 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 LINC00694P0DN24 101 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 CASC10Q5T4H9 136 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 C20orf203Q8NBC4 194 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 SCGB3A1Q96QR1 104 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 CSMD3Q7Z407 3707 aa9.73□□□□□ -0.85
PDLIM5-203ENST00000359265 F5H768 121 aa9.72□□□□□ -0.85
PDLIM5-203ENST00000359265 H0Y8G0 127 aa9.72□□□□□ -0.85
PDLIM5-203ENST00000359265 GYPEP15421 78 aa9.72□□□□□ -0.85
PDLIM5-203ENST00000359265 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
PDLIM5-203ENST00000359265 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
PDLIM5-203ENST00000359265 Q8N976 141 aa9.72□□□□□ -0.85
PDLIM5-203ENST00000359265 DNAH7Q8WXX0 4024 aa9.71□□□□□ -0.85
PDLIM5-203ENST00000359265 HTN3P15516 51 aa9.71□□□□□ -0.86
PDLIM5-203ENST00000359265 TMEM97Q5BJF2 176 aa9.71□□□□□ -0.86
PDLIM5-203ENST00000359265 Q6ZN92 141 aa9.71□□□□□ -0.86
PDLIM5-203ENST00000359265 ERASQ7Z444 233 aa9.71□□□□□ -0.86
PDLIM5-203ENST00000359265 PRSS1P07477 247 aa9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 S100A12P80511 92 aa9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 TIMM17AQ99595 171 aa9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 CHCHD7Q9BUK0 85 aa9.7□□□□□ -0.86
PDLIM5-203ENST00000359265 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
PDLIM5-203ENST00000359265 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
PDLIM5-203ENST00000359265 GTSF1LQ9H1H1 148 aa9.69□□□□□ -0.86
PDLIM5-203ENST00000359265 A0A0J9YY99 117 aa9.68□□□□□ -0.86
PDLIM5-203ENST00000359265 IGIPA6NJ69 53 aa9.68□□□□□ -0.86
PDLIM5-203ENST00000359265 SMAGPQ0VAQ4 97 aa9.68□□□□□ -0.86
PDLIM5-203ENST00000359265 TEX43Q6ZNM6 134 aa9.68□□□□□ -0.86
PDLIM5-203ENST00000359265 ATP6V0E2Q8NHE4 81 aa9.68□□□□□ -0.86
PDLIM5-203ENST00000359265 VSIG2Q96IQ7 327 aa9.68□□□□□ -0.86
PDLIM5-203ENST00000359265 SPANXA1Q9NS26 97 aa9.68□□□□□ -0.86
PDLIM5-203ENST00000359265 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 NPSP0C0P6 89 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 BAALCQ8WXS3 180 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 ICOSQ9Y6W8 199 aa9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 HUWE1Q7Z6Z7 4374 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-203ENST00000359265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 TRAV12-1A0A0B4J245 112 aa9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 ODF1Q14990 250 aa9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 NTM-AS1Q6ZSK4 140 aa9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 Q6ZTC4 211 aa9.66□□□□□ -0.86
PDLIM5-203ENST00000359265 SH2D6Q7Z4S9 175 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms