RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
COL20A1-201ENST00000358894 A0A0J9YX75 114 aa9.23□□□□□ -0.93
COL20A1-201ENST00000358894 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
COL20A1-201ENST00000358894 LINC00158P58513 81 aa9.23□□□□□ -0.93
COL20A1-201ENST00000358894 RHODO00212 210 aa9.22□□□□□ -0.93
COL20A1-201ENST00000358894 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
COL20A1-201ENST00000358894 PRIMA1Q86XR5 153 aa9.22□□□□□ -0.93
COL20A1-201ENST00000358894 HIST2H2BDQ6DRA6 164 aa9.22□□□□□ -0.93
COL20A1-201ENST00000358894 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
COL20A1-201ENST00000358894 LOC400499M0QZD8 3231 aa9.21□□□□□ -0.93
COL20A1-201ENST00000358894 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.93
COL20A1-201ENST00000358894 HTN3P15516 51 aa9.21□□□□□ -0.93
COL20A1-201ENST00000358894 EDN2P20800 178 aa9.21□□□□□ -0.93
COL20A1-201ENST00000358894 NRACQ8N912 160 aa9.21□□□□□ -0.93
COL20A1-201ENST00000358894 IGHG4P01861 327 aa9.21□□□□□ -0.93
COL20A1-201ENST00000358894 MUSTN1Q8IVN3 82 aa9.21□□□□□ -0.93
COL20A1-201ENST00000358894 PAX4O43316 350 aa9.21□□□□□ -0.94
COL20A1-201ENST00000358894 TMEM61Q8N0U2 210 aa9.21□□□□□ -0.94
COL20A1-201ENST00000358894 AVPP01185 164 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 DEFB130BP0DP73 79 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 DEFB130AP0DP74 79 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 MED14OSP0DP75 135 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 RHOHQ15669 191 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 U3KQE9 123 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 DAND5Q8N907 189 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
COL20A1-201ENST00000358894 TEX49A0A1B0GTD5 131 aa9.19□□□□□ -0.94
COL20A1-201ENST00000358894 P0DMU3 169 aa9.19□□□□□ -0.94
COL20A1-201ENST00000358894 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
COL20A1-201ENST00000358894 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
COL20A1-201ENST00000358894 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
COL20A1-201ENST00000358894 CRPP02741 224 aa9.19□□□□□ -0.94
COL20A1-201ENST00000358894 RNASE3P12724 160 aaKnown RBP9.19□□□□□ -0.94
COL20A1-201ENST00000358894 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
COL20A1-201ENST00000358894 FAM110AQ9BQ89 295 aa9.18□□□□□ -0.94
COL20A1-201ENST00000358894 CEMP1Q6PRD7 247 aaPredicted RBP9.18□□□□□ -0.94
COL20A1-201ENST00000358894 CLEC2BQ92478 149 aa9.18□□□□□ -0.94
COL20A1-201ENST00000358894 DEFB113Q30KQ7 82 aa9.18□□□□□ -0.94
COL20A1-201ENST00000358894 NDUFA11Q86Y39 141 aa9.17□□□□□ -0.94
COL20A1-201ENST00000358894 TNRC18O15417 2968 aaPredicted RBP9.17□□□□□ -0.94
COL20A1-201ENST00000358894 K7EQG2 157 aa9.17□□□□□ -0.94
COL20A1-201ENST00000358894 NEXN-AS1Q8NBZ9 246 aa9.17□□□□□ -0.94
COL20A1-201ENST00000358894 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
COL20A1-201ENST00000358894 IGKV3D-7A0A0C4DH55 119 aa9.16□□□□□ -0.94
COL20A1-201ENST00000358894 TIMM17AQ99595 171 aa9.16□□□□□ -0.94
COL20A1-201ENST00000358894 CITED2Q99967 270 aaPredicted RBP9.16□□□□□ -0.94
COL20A1-201ENST00000358894 INAFM2P0DMQ5 153 aa9.16□□□□□ -0.94
COL20A1-201ENST00000358894 RBMY1BA6NDE4 496 aaKnown RBP9.15□□□□□ -0.94
COL20A1-201ENST00000358894 RBMY1EA6NEQ0 496 aaKnown RBP9.15□□□□□ -0.94
COL20A1-201ENST00000358894 RBMY1DP0C7P1 496 aaKnown RBP9.15□□□□□ -0.94
COL20A1-201ENST00000358894 RBMY1A1P0DJD3 496 aaKnown RBP9.15□□□□□ -0.94
COL20A1-201ENST00000358894 RBMY1CP0DJD4 496 aa9.15□□□□□ -0.94
COL20A1-201ENST00000358894 PIFOQ8TCI5 191 aa9.15□□□□□ -0.94
COL20A1-201ENST00000358894 CCL24O00175 119 aa9.15□□□□□ -0.94
COL20A1-201ENST00000358894 PRM2P04554 102 aa9.15□□□□□ -0.94
COL20A1-201ENST00000358894 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
COL20A1-201ENST00000358894 HHLA3Q9XRX5 114 aa9.15□□□□□ -0.94
COL20A1-201ENST00000358894 NOP10Q9NPE3 64 aaKnown RBP9.15□□□□□ -0.95
COL20A1-201ENST00000358894 A0A1B0GX51 115 aa9.14□□□□□ -0.95
COL20A1-201ENST00000358894 COX8CQ7Z4L0 72 aa9.14□□□□□ -0.95
COL20A1-201ENST00000358894 TRBV10-2A0A0K0K1G8 114 aa9.14□□□□□ -0.95
COL20A1-201ENST00000358894 HERVK_113P63121 156 aa9.14□□□□□ -0.95
COL20A1-201ENST00000358894 PSMB8P28062 276 aa9.14□□□□□ -0.95
COL20A1-201ENST00000358894 COL27A1Q8IZC6 1860 aaPredicted RBP9.14□□□□□ -0.95
COL20A1-201ENST00000358894 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
COL20A1-201ENST00000358894 LEPROTO15243 131 aa9.13□□□□□ -0.95
COL20A1-201ENST00000358894 FASNP49327 2511 aaKnown RBP9.13□□□□□ -0.95
COL20A1-201ENST00000358894 BAALC-AS2P0C853 105 aa9.13□□□□□ -0.95
COL20A1-201ENST00000358894 PFN2P35080 140 aa9.13□□□□□ -0.95
COL20A1-201ENST00000358894 IGLV1-40P01703 118 aa9.13□□□□□ -0.95
COL20A1-201ENST00000358894 PROK1P58294 105 aa9.13□□□□□ -0.95
COL20A1-201ENST00000358894 WDFY3Q8IZQ1 3526 aa9.12□□□□□ -0.95
COL20A1-201ENST00000358894 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
COL20A1-201ENST00000358894 IGHV4-4A0A075B6R2 117 aa9.12□□□□□ -0.95
COL20A1-201ENST00000358894 DCANP1Q8TF63 244 aa9.12□□□□□ -0.95
COL20A1-201ENST00000358894 KLLNB2CW77 178 aa9.12□□□□□ -0.95
COL20A1-201ENST00000358894 ACYP1P07311 99 aa9.12□□□□□ -0.95
COL20A1-201ENST00000358894 CFAP47Q6ZTR5 3102 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 TMEM89A2RUT3 159 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 UQCRQO14949 82 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 LINC00694P0DN24 101 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
COL20A1-201ENST00000358894 C18orf65Q6ZTR6 163 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 ICOSQ9Y6W8 199 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 ATOX1O00244 68 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 M0QY20 66 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 NFE4Q86UQ8 179 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 TMEM243Q9BU79 118 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 CDIP1Q9H305 208 aa9.11□□□□□ -0.95
COL20A1-201ENST00000358894 Q9H8V8 135 aa9.1□□□□□ -0.95
COL20A1-201ENST00000358894 MALP21145 153 aa9.1□□□□□ -0.95
COL20A1-201ENST00000358894 HAMPP81172 84 aa9.1□□□□□ -0.95
COL20A1-201ENST00000358894 C6orf226Q5I0X4 101 aa9.1□□□□□ -0.95
COL20A1-201ENST00000358894 IGHV4-31P0DP07 118 aa9.1□□□□□ -0.95
COL20A1-201ENST00000358894 MAP6D1Q9H9H5 199 aa9.1□□□□□ -0.95
COL20A1-201ENST00000358894 A0A096LPF7 62 aa9.09□□□□□ -0.95
COL20A1-201ENST00000358894 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
COL20A1-201ENST00000358894 MRAPQ8TCY5 172 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms