RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 IGHV3-11P01762 117 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 TRIAP1O43715 76 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 KLHL30-AS1Q8NEE0 82 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 LINC00467Q9BRT7 94 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 JPT2Q9H910 190 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 CRIP2P52943 208 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-204ENST00000358025 MAPKAPK5-AS1Q8N8E1 139 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 IGKV2D-26A0A0A0MRZ7 120 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 TOMM7Q9P0U1 55 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 FN1P02751 2386 aaKnown RBP3.12□□□□□ -1.91
SYNE2-204ENST00000358025 PIEZO2Q9H5I5 2752 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 TRAV12-3A0A0B4J271 114 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 RPL28P46779 137 aaKnown RBP3.12□□□□□ -1.91
SYNE2-204ENST00000358025 CCL24O00175 119 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 IGHV3-53P01767 116 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 PRB1P04280 392 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 LYPD2Q6UXB3 125 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 C5orf56Q8N8D9 126 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 RBM3P98179 157 aaKnown RBP3.12□□□□□ -1.91
SYNE2-204ENST00000358025 E7EUB6 86 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 FXYD7P58549 80 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 PSMB8P28062 276 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 SND1-IT1Q9HBX3 110 aa3.12□□□□□ -1.91
SYNE2-204ENST00000358025 CCKP06307 115 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 HIST1H4AP62805 103 aaKnown RBP3.11□□□□□ -1.91
SYNE2-204ENST00000358025 IGHV3-64A0A075B6Q5 118 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 AMELXQ99217 191 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 ATP6V0E1O15342 81 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 ZFYVE26Q68DK2 2539 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 UBE2E2Q96LR5 201 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 SUMO4Q6EEV6 95 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 ODF3BA8MYP8 253 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 CCDC168Q8NDH2 2452 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 Q8N6K4 173 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 FRYQ5TBA9 3013 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 TRGV2A0A075B6R0 118 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 C1orf43Q9BWL3 253 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 IGHV3-73A0A0B4J1V6 119 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 ATP5J2P56134 94 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 HOXD3P31249 432 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-204ENST00000358025 TNRC6BQ9UPQ9 1833 aaKnown RBP3.11□□□□□ -1.91
SYNE2-204ENST00000358025 IGHV3-16A0A0C4DH30 117 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 A0A087WWL8 130 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 H3BUX3 64 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 CCDC140Q96MF4 163 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 PKD1L2Q7Z442 2459 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 SMIM9A6NGZ8 99 aa3.11□□□□□ -1.91
SYNE2-204ENST00000358025 C9orf85Q96MD7 179 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 MSRB1Q9NZV6 116 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 MSRB2Q9Y3D2 182 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 RNF114Q9Y508 228 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 TEX49A0A1B0GTD5 131 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 CXCL6P80162 114 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 PRSS33Q8NF86 280 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 NBEAQ8NFP9 2946 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 CHCHD5Q9BSY4 110 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 IGLV4-3A0A075B6K6 122 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 TLN2Q9Y4G6 2542 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 TRGV4A0A0C4DH28 118 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 MSMBP08118 114 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 CFHR3Q02985 330 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 LINC00308Q8TCZ7 52 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 CCL19Q99731 98 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 CRLF1O75462 422 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 ERC2-IT1O76042 136 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 C5orf38Q86SI9 138 aa3.1□□□□□ -1.91
SYNE2-204ENST00000358025 VPREB3Q9UKI3 123 aa3.09□□□□□ -1.91
SYNE2-204ENST00000358025 A0A096LNJ9 63 aa3.09□□□□□ -1.91
SYNE2-204ENST00000358025 K7ENP7 123 aa3.09□□□□□ -1.91
SYNE2-204ENST00000358025 GATA1P15976 413 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-204ENST00000358025 TRBV7-6A0A0J9YX20 115 aa3.09□□□□□ -1.91
SYNE2-204ENST00000358025 GNRH2O43555 120 aa3.09□□□□□ -1.91
SYNE2-204ENST00000358025 LINC01356Q8N9X3 169 aa3.09□□□□□ -1.91
SYNE2-204ENST00000358025 BPESC1Q9GZL8 116 aa3.09□□□□□ -1.91
SYNE2-204ENST00000358025 FUSP35637 526 aaKnown RBP eCLIP3.09□□□□□ -1.91
SYNE2-204ENST00000358025 SIRPDQ9H106 197 aa3.09□□□□□ -1.92
SYNE2-204ENST00000358025 FAM215AQ9Y5M1 114 aa3.09□□□□□ -1.92
SYNE2-204ENST00000358025 A0A0J9YXV3 536 aa3.09□□□□□ -1.92
SYNE2-204ENST00000358025 INSL3P51460 131 aa3.09□□□□□ -1.92
SYNE2-204ENST00000358025 SDIM1Q6ZPB5 146 aa3.09□□□□□ -1.92
SYNE2-204ENST00000358025 UBE2DNLQ8IWF7 75 aa3.09□□□□□ -1.92
SYNE2-204ENST00000358025 ZNF561-AS1K7EIQ3 104 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 KLK5Q9Y337 293 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-204ENST00000358025 RNASE3P12724 160 aaKnown RBP3.08□□□□□ -1.92
SYNE2-204ENST00000358025 PRB2P02812 416 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-204ENST00000358025 C16orf74Q96GX8 76 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 BEAN1Q3B7T3 259 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 IGLV4-69A0A075B6H9 119 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 IGLV5-45A0A087WSX0 123 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 NCOR2Q9Y618 2525 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-204ENST00000358025 MP68P56378 58 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 CTSZQ9UBR2 303 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 SMAD5-AS1Q9Y6J3 95 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 A0A087WZ39 114 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 K7EQD1 137 aa3.08□□□□□ -1.92
SYNE2-204ENST00000358025 DAD1P61803 113 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 BLCAPP62952 87 aa3.07□□□□□ -1.92
SYNE2-204ENST00000358025 SEM1Q6ZVN7 128 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms