RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 IGHG4P01861 327 aa9.52□□□□□ -0.89
BDNF-202ENST00000356660 LINC01620Q4KN68 170 aa9.52□□□□□ -0.89
BDNF-202ENST00000356660 UNQ9165/PRO28630Q6UXU0 137 aa9.52□□□□□ -0.89
BDNF-202ENST00000356660 CCDC140Q96MF4 163 aa9.52□□□□□ -0.89
BDNF-202ENST00000356660 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
BDNF-202ENST00000356660 DNAL4O96015 105 aa9.51□□□□□ -0.89
BDNF-202ENST00000356660 TRBV12-3P01733 135 aa9.51□□□□□ -0.89
BDNF-202ENST00000356660 TNFRSF13BO14836 293 aaPredicted RBP9.51□□□□□ -0.89
BDNF-202ENST00000356660 BRK1Q8WUW1 75 aa9.5□□□□□ -0.89
BDNF-202ENST00000356660 Q8N1Y9 231 aa9.5□□□□□ -0.89
BDNF-202ENST00000356660 C20orf173Q96LM9 149 aa9.5□□□□□ -0.89
BDNF-202ENST00000356660 CARD19Q96LW7 228 aa9.5□□□□□ -0.89
BDNF-202ENST00000356660 ZFAND3Q9H8U3 227 aa9.5□□□□□ -0.89
BDNF-202ENST00000356660 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
BDNF-202ENST00000356660 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
BDNF-202ENST00000356660 DAND5Q8N907 189 aa9.49□□□□□ -0.89
BDNF-202ENST00000356660 RS1O15537 224 aa9.49□□□□□ -0.89
BDNF-202ENST00000356660 CRIP2P52943 208 aaPredicted RBP9.49□□□□□ -0.89
BDNF-202ENST00000356660 PRO0461Q9UI25 63 aa9.49□□□□□ -0.89
BDNF-202ENST00000356660 NDUFA4O00483 81 aa9.48□□□□□ -0.89
BDNF-202ENST00000356660 DMXL1Q9Y485 3027 aa9.48□□□□□ -0.89
BDNF-202ENST00000356660 SLC25A29Q8N8R3 303 aa9.48□□□□□ -0.89
BDNF-202ENST00000356660 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
BDNF-202ENST00000356660 MRPL53Q96EL3 112 aaKnown RBP9.47□□□□□ -0.89
BDNF-202ENST00000356660 AJUBAQ96IF1 538 aa9.47□□□□□ -0.89
BDNF-202ENST00000356660 UBE2D1P51668 147 aa9.47□□□□□ -0.89
BDNF-202ENST00000356660 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
BDNF-202ENST00000356660 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
BDNF-202ENST00000356660 LY6G5BQ8NDX9 201 aa9.47□□□□□ -0.89
BDNF-202ENST00000356660 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
BDNF-202ENST00000356660 LENEPQ9Y5L5 61 aa9.47□□□□□ -0.89
BDNF-202ENST00000356660 ZFAND2AQ8N6M9 145 aa9.47□□□□□ -0.89
BDNF-202ENST00000356660 BRI3O95415 125 aa9.46□□□□□ -0.89
BDNF-202ENST00000356660 IGHV3-30P01768 117 aa9.46□□□□□ -0.89
BDNF-202ENST00000356660 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.89
BDNF-202ENST00000356660 S100A7L2Q5SY68 101 aa9.46□□□□□ -0.89
BDNF-202ENST00000356660 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
BDNF-202ENST00000356660 LINC00158P58513 81 aa9.46□□□□□ -0.9
BDNF-202ENST00000356660 LEPROTO15243 131 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 NDUFA7O95182 113 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 MDFICQ9P1T7 246 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 I3L3M4 83 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 IGHV3-33P01772 117 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 CRLF1O75462 422 aa9.45□□□□□ -0.9
BDNF-202ENST00000356660 CLPSL1A2RUU4 121 aa9.44□□□□□ -0.9
BDNF-202ENST00000356660 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
BDNF-202ENST00000356660 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
BDNF-202ENST00000356660 ZNRF2Q8NHG8 242 aa9.44□□□□□ -0.9
BDNF-202ENST00000356660 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
BDNF-202ENST00000356660 ODF3BA8MYP8 253 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 INSP01308 110 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 C1orf195Q5TG92 126 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 LRRC75A-AS1Q8N1F1 130 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 TIMM17AQ99595 171 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 SPANXCQ9NY87 97 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
BDNF-202ENST00000356660 HOXD3P31249 432 aaPredicted RBP9.43□□□□□ -0.9
BDNF-202ENST00000356660 UBE2D3P61077 147 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 UBE2D2P62837 147 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 ICOSQ9Y6W8 199 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
BDNF-202ENST00000356660 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
BDNF-202ENST00000356660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.42□□□□□ -0.9
BDNF-202ENST00000356660 TRBV10-2A0A0K0K1G8 114 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 IGKV2-29A2NJV5 120 aaPredicted RBP9.42□□□□□ -0.9
BDNF-202ENST00000356660 CDSNQ15517 529 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 RETNQ9HD89 108 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 HECTD1Q9ULT8 2610 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 A8MZ25 164 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 IGHV3-30-3P0DP02 117 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 MALP21145 153 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 SLURP1P55000 103 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 FHL3Q13643 280 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
BDNF-202ENST00000356660 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 UQCRQO14949 82 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 TRIAP1O43715 76 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 C5orf56Q8N8D9 126 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 J3QLI3 93 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 P0DMU3 169 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 ZNF580Q9UK33 172 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 LINC01619G3V211 115 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 PAX4O43316 350 aa9.41□□□□□ -0.9
BDNF-202ENST00000356660 SMG1Q96Q15 3661 aaKnown RBP9.41□□□□□ -0.9
BDNF-202ENST00000356660 A0A096LPF7 62 aa9.4□□□□□ -0.9
BDNF-202ENST00000356660 A0A0J9YXY3 114 aa9.4□□□□□ -0.9
BDNF-202ENST00000356660 MGAM2Q2M2H8 2515 aa9.4□□□□□ -0.9
BDNF-202ENST00000356660 IGLV4-69A0A075B6H9 119 aa9.4□□□□□ -0.9
BDNF-202ENST00000356660 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.9
BDNF-202ENST00000356660 HIST2H2BDQ6DRA6 164 aa9.4□□□□□ -0.9
BDNF-202ENST00000356660 IGHV4-4A0A075B6R2 117 aa9.4□□□□□ -0.91
BDNF-202ENST00000356660 ZNF22P17026 224 aaPredicted RBP9.4□□□□□ -0.91
BDNF-202ENST00000356660 LMO4P61968 165 aa9.4□□□□□ -0.91
BDNF-202ENST00000356660 Q6ZSV7 163 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms