RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 GTF3C1Q12789 2109 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 CCDC140Q96MF4 163 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 MDFICQ9P1T7 246 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 CRYGBP07316 175 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 LY6G6DO95868 133 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 IGLV2-8P01709 118 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 Q6ZTI0 123 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 IGKV1D-37A0A075B6S9 117 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 UNQ9165/PRO28630Q6UXU0 137 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 H3BT86 120 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 CLEC2BQ92478 149 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 NUPR2A6NF83 97 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 IGLV1-47P01700 117 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 MIAQ16674 131 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 OBSL1O75147 1896 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 FAM236AA0A1B0GUQ0 79 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 FAM236BA0A1B0GV22 79 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 MSRB1Q9NZV6 116 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 PATE2Q6UY27 113 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 ODF1Q14990 250 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 ATP5EP2Q5VTU8 51 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 Q6ZUT4 128 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 DHRS4-AS1Q9P1J3 65 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 BDP1A6H8Y1 2624 aa4.19□□□□□ -1.74
PTPRD-202ENST00000356435 TEN1Q86WV5 123 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 E9PLD3 99 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 UBE2D2P62837 147 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 SPG11Q96JI7 2443 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-202ENST00000356435 SYCNQ0VAF6 134 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 SPTSSBQ8NFR3 76 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 LOC107984640A0A0U1RRK4 108 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 BRWD1-AS2P59051 145 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 DEFB114Q30KQ6 69 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 DOCK7Q96N67 2140 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 A0A096LNI7 61 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 DOCK10Q96BY6 2186 aa4.18□□□□□ -1.74
PTPRD-202ENST00000356435 ZNF843Q8N446 348 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 MYO18BQ8IUG5 2567 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 IGKV2D-26A0A0A0MRZ7 120 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 C19orf71A6NCJ1 209 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 IGF1P05019 195 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 C19orf84I3L1E1 186 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 MLST8Q9BVC4 326 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 TTC28Q96AY4 2481 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 Q8NA96 180 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 FAM167A-AS1Q96KT0 104 aa4.17□□□□□ -1.74
PTPRD-202ENST00000356435 M0R2N4 97 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 TCL1BO95988 128 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 FSHBP01225 129 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 WFDC10BQ8IUB3 73 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 LINC00574Q9H8X3 128 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 FOXI1Q12951 378 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 Q6ZSV7 163 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 TEX49A0A1B0GTD5 131 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 IBA57-AS1B1ANH7 110 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 LMO4P61968 165 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 TRBV6-4A0A1B0GX49 114 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 NCOA6Q14686 2063 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-202ENST00000356435 ADAMTS9Q9P2N4 1935 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 PIEZO1Q92508 2521 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 SONP18583 2426 aaKnown RBP4.16□□□□□ -1.74
PTPRD-202ENST00000356435 ZNF407Q9C0G0 2248 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 FER1L5A0AVI2 2057 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 DEFB1P60022 68 aa4.16□□□□□ -1.74
PTPRD-202ENST00000356435 IGLV2-18A0A075B6J9 118 aa4.15□□□□□ -1.74
PTPRD-202ENST00000356435 TRAV23DV6A0A075B6W5 121 aa4.15□□□□□ -1.74
PTPRD-202ENST00000356435 FSTL3O95633 263 aa4.15□□□□□ -1.74
PTPRD-202ENST00000356435 LINC00482Q8N8I6 264 aa4.15□□□□□ -1.74
PTPRD-202ENST00000356435 C9orf85Q96MD7 179 aa4.15□□□□□ -1.74
PTPRD-202ENST00000356435 CUL9Q8IWT3 2517 aa4.15□□□□□ -1.74
PTPRD-202ENST00000356435 CEMP1Q6PRD7 247 aaPredicted RBP4.15□□□□□ -1.74
PTPRD-202ENST00000356435 NEXN-AS1Q8NBZ9 246 aa4.15□□□□□ -1.74
PTPRD-202ENST00000356435 CFAP126Q5VTH2 177 aa4.15□□□□□ -1.75
PTPRD-202ENST00000356435 K7EQG2 157 aa4.15□□□□□ -1.75
PTPRD-202ENST00000356435 C2orf91Q6ZV80 131 aa4.15□□□□□ -1.75
PTPRD-202ENST00000356435 PLAC8L1A1L4L8 177 aa4.15□□□□□ -1.75
PTPRD-202ENST00000356435 LINC00467Q9BRT7 94 aa4.15□□□□□ -1.75
PTPRD-202ENST00000356435 LY6LH3BQJ8 138 aa4.15□□□□□ -1.75
PTPRD-202ENST00000356435 TRBV6-8A0A0A6YYG3 113 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 FRMD6-AS1P0C7T7 363 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 SERP1Q9Y6X1 66 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 SPINK6Q6UWN8 80 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 ZFHX2Q9C0A1 2572 aaPredicted RBP4.14□□□□□ -1.75
PTPRD-202ENST00000356435 KIAA1549LQ6ZVL6 1849 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
PTPRD-202ENST00000356435 ZGRF1Q86YA3 2104 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 A0A0J9YXY3 114 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 M0R378 163 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 B5MCH6 92 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 PLA2G2AP14555 144 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 A0A1W2PNU3 283 aaPredicted RBP4.14□□□□□ -1.75
PTPRD-202ENST00000356435 FXYD2P54710 66 aa4.14□□□□□ -1.75
PTPRD-202ENST00000356435 KPRPQ5T749 579 aaPredicted RBP4.14□□□□□ -1.75
PTPRD-202ENST00000356435 HRCT1Q6UXD1 115 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 SPRY4Q9C004 299 aa4.13□□□□□ -1.75
PTPRD-202ENST00000356435 RPL28P46779 137 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms