RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 IGHV1-46P01743 117 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 RNASE2P10153 161 aaKnown RBP3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 ZNF22P17026 224 aaPredicted RBP3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 HOXD3P31249 432 aaPredicted RBP3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 TMEM30BQ3MIR4 351 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 FAM53AQ6NSI3 398 aaPredicted RBP3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 Q86TA4 180 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 DCANP1Q8TF63 244 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 FAM167A-AS1Q96KT0 104 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 FANCD2OSQ96PS1 177 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 DCTN5Q9BTE1 182 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 TIMM21Q9BVV7 248 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 LINC00574Q9H8X3 128 aa3.67□□□□□ -1.82
HMBOX1-202ENST00000355231 IGHV3-43A0A0B4J1X8 118 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 A0A0J9YX75 114 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 TRBV10-3A0A0K0K1G6 114 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 PAX4O43316 350 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 SPRY3O43610 288 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 NXPH4O95158 308 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 IGF1P05019 195 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 IGHV3-43DP0DP04 118 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 XCL1P47992 114 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 SNRPD3P62318 126 aaKnown RBP3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 KLKP1Q107X0 134 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 C17orf58Q2M2W7 97 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 FP248Q71RG6 208 aaPredicted RBP3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 LYPD1Q8N2G4 141 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 TMEM75Q8N9X5 138 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 FXYD5Q96DB9 178 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 MRPL53Q96EL3 112 aaKnown RBP3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 GAFA1Q96PS6 74 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 OVOL2Q9BRP0 275 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 XCL2Q9UBD3 114 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 ICOSQ9Y6W8 199 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 DSCAML1Q8TD84 2053 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 DSCAMO60469 2012 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 ROS1P08922 2347 aa3.66□□□□□ -1.82
HMBOX1-202ENST00000355231 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 TMEM223A0PJW6 202 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 SDHAF1A6NFY7 115 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 CCKP06307 115 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 SAA4P35542 130 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 RBM3P98179 157 aaKnown RBP3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 FHL2Q14192 279 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 DEFB113Q30KQ7 82 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 C2orf83Q53S99 150 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 DYNLRB2Q8TF09 96 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 KRTAP4-5Q9BYR2 181 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 FN1P02751 2386 aaKnown RBP3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 CSPG4Q6UVK1 2322 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 JMJD1CQ15652 2540 aa3.65□□□□□ -1.82
HMBOX1-202ENST00000355231 RAI1Q7Z5J4 1906 aaPredicted RBP3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 C11orf86A6NJI1 115 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 M0R3E3 92 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 UBE2L6O14933 153 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 PPP1R17O96001 155 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 DNAL4O96015 105 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 ZNF134P52741 427 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 DAD1P61803 113 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 BSPH1Q075Z2 132 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 RHOHQ15669 191 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 DYNAPQ8N1N2 210 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 ZCCHC24Q8N2G6 241 aaKnown RBP3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 FAM216BQ8N7L0 139 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 C1orf159Q96HA4 380 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 CCDC140Q96MF4 163 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
HMBOX1-202ENST00000355231 NSD1Q96L73 2696 aaPredicted RBP3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 TRAV13-2A0A0B4J235 113 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 IGHV1-69DA0A0B4J2H0 117 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 H7BZZ5 65 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 TRIAP1O43715 76 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 LINC00205P59089 165 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 LYZL1Q6UWQ5 148 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 LINC00322Q6ZN03 302 aaPredicted RBP3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 SMCR5Q8TEV8 140 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 PLPPR2Q96GM1 343 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 CNFNQ9BYD5 112 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 CYSTM1Q9H1C7 97 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 SVEP1Q4LDE5 3571 aa3.64□□□□□ -1.83
HMBOX1-202ENST00000355231 DYSFO75923 2080 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 CUBNO60494 3623 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 TRBV27A0A0K0K1C4 114 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 IBA57-AS1B1ANH7 110 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 OVOL3O00110 214 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 LY6G6DO95868 133 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 SAA2P0DJI9 122 aaPredicted RBP3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 APOC4P55056 127 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 RPL39P5Q59GN2 51 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 COX8CQ7Z4L0 72 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 WFDC3Q8IUB2 231 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 LY6G5BQ8NDX9 201 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 TOMM6Q96B49 74 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 C17orf77Q96MU5 243 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 PRR25Q96S07 402 aa3.63□□□□□ -1.83
HMBOX1-202ENST00000355231 CCL13Q99616 98 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms