RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PSMG3-AS1Q96PY0 264 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 PTPN13Q12923 2485 aa7.01□□□□□ -1.29
SMG6-202ENST00000354901 TMEM263Q8WUH6 116 aaKnown RBP7.01□□□□□ -1.29
SMG6-202ENST00000354901 WIPF1O43516 503 aa7□□□□□ -1.29
SMG6-202ENST00000354901 C9orf139Q6ZV77 190 aa7□□□□□ -1.29
SMG6-202ENST00000354901 GPHB5Q86YW7 130 aa7□□□□□ -1.29
SMG6-202ENST00000354901 CSMD2Q7Z408 3487 aa7□□□□□ -1.29
SMG6-202ENST00000354901 SETD2Q9BYW2 2564 aaPredicted RBP7□□□□□ -1.29
SMG6-202ENST00000354901 ABCA12Q86UK0 2595 aa7□□□□□ -1.29
SMG6-202ENST00000354901 RHOHQ15669 191 aa7□□□□□ -1.29
SMG6-202ENST00000354901 C10orf105Q8TEF2 133 aa7□□□□□ -1.29
SMG6-202ENST00000354901 CYSTM1Q9H1C7 97 aa7□□□□□ -1.29
SMG6-202ENST00000354901 ICOSQ9Y6W8 199 aa7□□□□□ -1.29
SMG6-202ENST00000354901 U3KQE9 123 aa7□□□□□ -1.29
SMG6-202ENST00000354901 SONP18583 2426 aaKnown RBP6.99□□□□□ -1.29
SMG6-202ENST00000354901 A0A087WWL8 130 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 RNASE13Q5GAN3 156 aaKnown RBP6.99□□□□□ -1.29
SMG6-202ENST00000354901 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 RHPN1-AS1Q9BWJ2 59 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 C2CD3Q4AC94 2353 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 MRAPQ8TCY5 172 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 JPT2Q9H910 190 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 FAM223BA6NKX1 122 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 FAM223AQ8IWN6 122 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 ZNRF2Q8NHG8 242 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 MUC4Q99102 2169 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 CCL19Q99731 98 aa6.99□□□□□ -1.29
SMG6-202ENST00000354901 WNK1Q9H4A3 2382 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 IGHV4-30-2A0A087WSY4 118 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 TRAV21A0A0B4J279 112 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 CRYGDP07320 174 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 V9GYY9 64 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 ANKRD17O75179 2603 aaKnown RBP6.98□□□□□ -1.29
SMG6-202ENST00000354901 IGLV4-69A0A075B6H9 119 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 C10orf99Q6UWK7 81 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 MAPK1IP1LQ8NDC0 245 aa6.98□□□□□ -1.29
SMG6-202ENST00000354901 CUBNO60494 3623 aa6.97□□□□□ -1.29
SMG6-202ENST00000354901 A8MZ25 164 aa6.97□□□□□ -1.29
SMG6-202ENST00000354901 SDIM1Q6ZPB5 146 aa6.97□□□□□ -1.29
SMG6-202ENST00000354901 WFDC11Q8NEX6 87 aa6.97□□□□□ -1.29
SMG6-202ENST00000354901 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
SMG6-202ENST00000354901 MRPL53Q96EL3 112 aaKnown RBP6.97□□□□□ -1.29
SMG6-202ENST00000354901 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
SMG6-202ENST00000354901 NDUFA4O00483 81 aa6.97□□□□□ -1.29
SMG6-202ENST00000354901 A0A1B0GX51 115 aa6.96□□□□□ -1.29
SMG6-202ENST00000354901 LINC01546A6NGU7 62 aa6.96□□□□□ -1.29
SMG6-202ENST00000354901 AVPP01185 164 aa6.96□□□□□ -1.29
SMG6-202ENST00000354901 ZNF625Q96I27 306 aaPredicted RBP6.96□□□□□ -1.29
SMG6-202ENST00000354901 A0A0J9YXV3 536 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 CIRBPQ14011 172 aaKnown RBP6.96□□□□□ -1.3
SMG6-202ENST00000354901 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 DPH3P1Q9H4G8 78 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 OVOL1O14753 267 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 TSHBP01222 138 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 P0DMU3 169 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 FAM231AP0DMU4 169 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 FAM231CP0DMU5 169 aa6.96□□□□□ -1.3
SMG6-202ENST00000354901 IGSF10Q6WRI0 2623 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 TRAV12-2A0A075B6T6 113 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 A0A087WVE0 104 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 POM121L12Q8N7R1 296 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 NAV2Q8IVL1 2488 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 COX7CP15954 63 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 DSCR9P59020 149 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 C19orf54Q5BKX5 351 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 CCDC168Q8NDH2 2452 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 TRBV7-7A0A0K0K1E9 115 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 I3L3M4 83 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 IGHG2P01859 326 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
SMG6-202ENST00000354901 RNASE3P12724 160 aaKnown RBP6.95□□□□□ -1.3
SMG6-202ENST00000354901 PRRC2AP48634 2157 aaKnown RBP6.95□□□□□ -1.3
SMG6-202ENST00000354901 A0A0B4J2C4 111 aa6.94□□□□□ -1.3
SMG6-202ENST00000354901 F8WDY8 70 aa6.94□□□□□ -1.3
SMG6-202ENST00000354901 SOCS3O14543 225 aa6.94□□□□□ -1.3
SMG6-202ENST00000354901 HTN1P15515 57 aa6.94□□□□□ -1.3
SMG6-202ENST00000354901 HOXD3P31249 432 aaPredicted RBP6.94□□□□□ -1.3
SMG6-202ENST00000354901 DAZ1Q9NQZ3 744 aaKnown RBP6.94□□□□□ -1.3
SMG6-202ENST00000354901 KLK9Q2XQG4 91 aa6.94□□□□□ -1.3
SMG6-202ENST00000354901 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
SMG6-202ENST00000354901 KLK9Q9UKQ9 250 aa6.94□□□□□ -1.3
SMG6-202ENST00000354901 ZNF462Q96JM2 2506 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 H3BT86 120 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 IGHV4-59P01825 116 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 MSMBP08118 114 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 BRK1Q8WUW1 75 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 USMG5Q96IX5 58 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 IGHV4-4A0A075B6R2 117 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 A6NDX4 124 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 NXPH4O95158 308 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 OXTP01178 125 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 LENEPQ9Y5L5 61 aa6.93□□□□□ -1.3
SMG6-202ENST00000354901 TMEM223A0PJW6 202 aa6.92□□□□□ -1.3
SMG6-202ENST00000354901 HIST1H4AP62805 103 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms