RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 H7C2G1 150 aa12.15□□□□□ -0.46
PDAP1-201ENST00000350498 HERVK_113P61574 105 aa12.15□□□□□ -0.46
PDAP1-201ENST00000350498 FOXI1Q12951 378 aa12.14□□□□□ -0.47
PDAP1-201ENST00000350498 TIMM17AQ99595 171 aa12.14□□□□□ -0.47
PDAP1-201ENST00000350498 SPATA25Q9BR10 227 aa12.14□□□□□ -0.47
PDAP1-201ENST00000350498 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
PDAP1-201ENST00000350498 UBE2D3P61077 147 aa12.14□□□□□ -0.47
PDAP1-201ENST00000350498 UBE2D2P62837 147 aa12.14□□□□□ -0.47
PDAP1-201ENST00000350498 J3QR89 54 aa12.13□□□□□ -0.47
PDAP1-201ENST00000350498 SLC25A29Q8N8R3 303 aa12.13□□□□□ -0.47
PDAP1-201ENST00000350498 SYT8Q8NBV8 401 aa12.13□□□□□ -0.47
PDAP1-201ENST00000350498 TMEM141Q96I45 108 aa12.13□□□□□ -0.47
PDAP1-201ENST00000350498 Q6ZSN1 163 aa12.13□□□□□ -0.47
PDAP1-201ENST00000350498 RNF152Q8N8N0 203 aa12.13□□□□□ -0.47
PDAP1-201ENST00000350498 ODF3Q96PU9 254 aa12.13□□□□□ -0.47
PDAP1-201ENST00000350498 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
PDAP1-201ENST00000350498 C2CD3Q4AC94 2353 aa12.12□□□□□ -0.47
PDAP1-201ENST00000350498 TRAV2A0A0B4J234 112 aa12.12□□□□□ -0.47
PDAP1-201ENST00000350498 H3BMM0 161 aa12.12□□□□□ -0.47
PDAP1-201ENST00000350498 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
PDAP1-201ENST00000350498 C1QTNF4Q9BXJ3 329 aa12.12□□□□□ -0.47
PDAP1-201ENST00000350498 A4D1N5 150 aa12.11□□□□□ -0.47
PDAP1-201ENST00000350498 CARD19Q96LW7 228 aa12.11□□□□□ -0.47
PDAP1-201ENST00000350498 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
PDAP1-201ENST00000350498 TRBV6-5A0A0K0K1A5 114 aa12.11□□□□□ -0.47
PDAP1-201ENST00000350498 Q6ZSV7 163 aa12.1□□□□□ -0.47
PDAP1-201ENST00000350498 A8MZ25 164 aa12.1□□□□□ -0.47
PDAP1-201ENST00000350498 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-201ENST00000350498 PAPPA-AS1Q5QFB9 102 aa12.1□□□□□ -0.47
PDAP1-201ENST00000350498 TRPT1Q86TN4 253 aaKnown RBP12.1□□□□□ -0.47
PDAP1-201ENST00000350498 CDIP1Q9H305 208 aa12.1□□□□□ -0.47
PDAP1-201ENST00000350498 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
PDAP1-201ENST00000350498 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 C10orf126Q8N4M7 172 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 SPXQ9BT56 116 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 MAP6D1Q9H9H5 199 aa12.09□□□□□ -0.47
PDAP1-201ENST00000350498 ANK3Q12955 4377 aaKnown RBP12.09□□□□□ -0.47
PDAP1-201ENST00000350498 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
PDAP1-201ENST00000350498 MUSTN1Q8IVN3 82 aa12.08□□□□□ -0.48
PDAP1-201ENST00000350498 Q8N2B8 174 aa12.08□□□□□ -0.48
PDAP1-201ENST00000350498 PRO1854Q9UHT4 67 aa12.08□□□□□ -0.48
PDAP1-201ENST00000350498 RHODO00212 210 aa12.07□□□□□ -0.48
PDAP1-201ENST00000350498 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
PDAP1-201ENST00000350498 MT-ATP8P03928 68 aa12.07□□□□□ -0.48
PDAP1-201ENST00000350498 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 NPC2P61916 151 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 DEFB114Q30KQ6 69 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 DYNLRB2Q8TF09 96 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 C4orf3Q8WVX3 66 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 DNAJC9-AS1A6NH13 148 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 I3L3M4 83 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 VCX2Q9H322 139 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 XCL2Q9UBD3 114 aa12.06□□□□□ -0.48
PDAP1-201ENST00000350498 TRGV11A0A075B6L2 103 aa12.05□□□□□ -0.48
PDAP1-201ENST00000350498 LEPROTO15243 131 aa12.05□□□□□ -0.48
PDAP1-201ENST00000350498 CD28P10747 220 aa12.05□□□□□ -0.48
PDAP1-201ENST00000350498 XGP55808 180 aa12.04□□□□□ -0.48
PDAP1-201ENST00000350498 ANKRD29Q8N6D5 301 aa12.04□□□□□ -0.48
PDAP1-201ENST00000350498 LINC01587Q99440 93 aa12.04□□□□□ -0.48
PDAP1-201ENST00000350498 RHOHQ15669 191 aa12.03□□□□□ -0.48
PDAP1-201ENST00000350498 TMEM263Q8WUH6 116 aaKnown RBP12.03□□□□□ -0.48
PDAP1-201ENST00000350498 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
PDAP1-201ENST00000350498 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
PDAP1-201ENST00000350498 LRRC75A-AS1Q8N1F1 130 aa12.03□□□□□ -0.48
PDAP1-201ENST00000350498 FASNP49327 2511 aaKnown RBP12.02□□□□□ -0.48
PDAP1-201ENST00000350498 C9JAW5 83 aa12.02□□□□□ -0.48
PDAP1-201ENST00000350498 ODF3L2Q3SX64 289 aa12.02□□□□□ -0.48
PDAP1-201ENST00000350498 TEN1Q86WV5 123 aa12.02□□□□□ -0.48
PDAP1-201ENST00000350498 PEMTQ9UBM1 199 aa12.02□□□□□ -0.48
PDAP1-201ENST00000350498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.02□□□□□ -0.49
PDAP1-201ENST00000350498 A0A0J9YXY3 114 aa12.02□□□□□ -0.49
PDAP1-201ENST00000350498 IGKV2-29A2NJV5 120 aaPredicted RBP12.02□□□□□ -0.49
PDAP1-201ENST00000350498 ADAMTSL4-AS1Q5T5F5 129 aa12.02□□□□□ -0.49
PDAP1-201ENST00000350498 A8MWV9 139 aa12.01□□□□□ -0.49
PDAP1-201ENST00000350498 PRSS2P07478 247 aa12.01□□□□□ -0.49
PDAP1-201ENST00000350498 SPINK8P0C7L1 97 aa12.01□□□□□ -0.49
PDAP1-201ENST00000350498 C11orf72Q8NBR9 251 aa12.01□□□□□ -0.49
PDAP1-201ENST00000350498 WFDC10AQ9H1F0 79 aa12.01□□□□□ -0.49
PDAP1-201ENST00000350498 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
PDAP1-201ENST00000350498 Q1RN00 199 aa12□□□□□ -0.49
PDAP1-201ENST00000350498 ATP6V0E2Q8NHE4 81 aa12□□□□□ -0.49
PDAP1-201ENST00000350498 CITED2Q99967 270 aaPredicted RBP12□□□□□ -0.49
PDAP1-201ENST00000350498 SCGB1A1P11684 91 aa12□□□□□ -0.49
PDAP1-201ENST00000350498 A8MTW9 85 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 M0R2P5 195 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 PPDPFLQ8WWR9 84 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 SLC25A20O43772 301 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 Q6ZUT4 128 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 DAND5Q8N907 189 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 NOTCH2Q04721 2471 aa11.99□□□□□ -0.49
PDAP1-201ENST00000350498 CKS1BP61024 79 aa11.98□□□□□ -0.49
PDAP1-201ENST00000350498 LITAFQ99732 161 aa11.98□□□□□ -0.49
PDAP1-201ENST00000350498 TIMM21Q9BVV7 248 aa11.98□□□□□ -0.49
PDAP1-201ENST00000350498 HECTD1Q9ULT8 2610 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms