RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 A8MTW9 85 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 POLR2KP53803 58 aaKnown RBP9.76□□□□□ -0.85
UBA3-201ENST00000349511 RPL32P62910 135 aaKnown RBP9.76□□□□□ -0.85
UBA3-201ENST00000349511 C9orf66Q5T8R8 295 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 TP53TG1Q9Y2A0 90 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 A0A087WWL8 130 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 F8W1H4 67 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 TRPT1Q86TN4 253 aaKnown RBP9.76□□□□□ -0.85
UBA3-201ENST00000349511 PLEKHB2Q96CS7 222 aa9.76□□□□□ -0.85
UBA3-201ENST00000349511 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
UBA3-201ENST00000349511 IGIPA6NJ69 53 aa9.75□□□□□ -0.85
UBA3-201ENST00000349511 H3BMG7 143 aa9.75□□□□□ -0.85
UBA3-201ENST00000349511 WFDC2Q14508 124 aa9.75□□□□□ -0.85
UBA3-201ENST00000349511 NBEAL2Q6ZNJ1 2754 aa9.75□□□□□ -0.85
UBA3-201ENST00000349511 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
UBA3-201ENST00000349511 F5H697 171 aa9.74□□□□□ -0.85
UBA3-201ENST00000349511 VCYO14598 125 aa9.74□□□□□ -0.85
UBA3-201ENST00000349511 EMP1P54849 157 aa9.74□□□□□ -0.85
UBA3-201ENST00000349511 LINC01587Q99440 93 aa9.74□□□□□ -0.85
UBA3-201ENST00000349511 INSL3P51460 131 aa9.73□□□□□ -0.85
UBA3-201ENST00000349511 RPL39P62891 51 aaKnown RBP9.73□□□□□ -0.85
UBA3-201ENST00000349511 PMVKQ15126 192 aa9.73□□□□□ -0.85
UBA3-201ENST00000349511 MORN3Q6PF18 240 aaPredicted RBP9.73□□□□□ -0.85
UBA3-201ENST00000349511 SCGB1D4Q6XE38 83 aa9.73□□□□□ -0.85
UBA3-201ENST00000349511 SPANXB1Q9NS25 103 aaPredicted RBP9.73□□□□□ -0.85
UBA3-201ENST00000349511 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
UBA3-201ENST00000349511 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
UBA3-201ENST00000349511 ANK2Q01484 3957 aa9.72□□□□□ -0.85
UBA3-201ENST00000349511 SDHAF1A6NFY7 115 aa9.72□□□□□ -0.85
UBA3-201ENST00000349511 LINC01549A6NIU2 74 aa9.72□□□□□ -0.85
UBA3-201ENST00000349511 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
UBA3-201ENST00000349511 PAPPA-AS1Q5QFB9 102 aa9.72□□□□□ -0.85
UBA3-201ENST00000349511 TMEM141Q96I45 108 aa9.72□□□□□ -0.85
UBA3-201ENST00000349511 C9orf85Q96MD7 179 aa9.72□□□□□ -0.85
UBA3-201ENST00000349511 INSP01308 110 aa9.71□□□□□ -0.85
UBA3-201ENST00000349511 CMC4P56277 68 aaPredicted RBP9.71□□□□□ -0.85
UBA3-201ENST00000349511 FAM74A4Q5TZK3 123 aa9.71□□□□□ -0.85
UBA3-201ENST00000349511 WFDC9Q8NEX5 89 aa9.71□□□□□ -0.85
UBA3-201ENST00000349511 TRBV6-5A0A0K0K1A5 114 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
UBA3-201ENST00000349511 HERVK_113P61574 105 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 SRSF9Q13242 221 aaKnown RBP eCLIP9.71□□□□□ -0.86
UBA3-201ENST00000349511 GAGE13Q4V321 117 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 C1orf158Q8N1D5 194 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 MTURNQ8N3F0 131 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 TIMM17AQ99595 171 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 PGPEP1Q9NXJ5 209 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 PRO0461Q9UI25 63 aa9.71□□□□□ -0.86
UBA3-201ENST00000349511 TRBV27A0A0K0K1C4 114 aa9.7□□□□□ -0.86
UBA3-201ENST00000349511 AZU1P20160 251 aa9.7□□□□□ -0.86
UBA3-201ENST00000349511 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
UBA3-201ENST00000349511 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
UBA3-201ENST00000349511 A6NJY4 79 aa9.7□□□□□ -0.86
UBA3-201ENST00000349511 SHISA2Q6UWI4 295 aa9.7□□□□□ -0.86
UBA3-201ENST00000349511 FAM110AQ9BQ89 295 aa9.7□□□□□ -0.86
UBA3-201ENST00000349511 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
UBA3-201ENST00000349511 A0A0J9YY99 117 aa9.69□□□□□ -0.86
UBA3-201ENST00000349511 UBE2D1P51668 147 aa9.69□□□□□ -0.86
UBA3-201ENST00000349511 ZNF56Q15929 161 aa9.69□□□□□ -0.86
UBA3-201ENST00000349511 ETDBQ3ZM63 59 aa9.69□□□□□ -0.86
UBA3-201ENST00000349511 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
UBA3-201ENST00000349511 ZNRF2Q8NHG8 242 aa9.69□□□□□ -0.86
UBA3-201ENST00000349511 TSPEAR-AS2P59090 65 aa9.68□□□□□ -0.86
UBA3-201ENST00000349511 ZNF876PQ49A33 203 aa9.68□□□□□ -0.86
UBA3-201ENST00000349511 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
UBA3-201ENST00000349511 CLUHP3Q96NS8 147 aa9.68□□□□□ -0.86
UBA3-201ENST00000349511 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
UBA3-201ENST00000349511 M0QY20 66 aa9.68□□□□□ -0.86
UBA3-201ENST00000349511 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
UBA3-201ENST00000349511 TSPAN13O95857 204 aa9.67□□□□□ -0.86
UBA3-201ENST00000349511 APOMO95445 188 aa9.67□□□□□ -0.86
UBA3-201ENST00000349511 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
UBA3-201ENST00000349511 J3QR89 54 aa9.66□□□□□ -0.86
UBA3-201ENST00000349511 P0DMU3 169 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 FAM231AP0DMU4 169 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 FAM231CP0DMU5 169 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 RHOHQ15669 191 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 IGHV3-30P01768 117 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 IGHV3-30-5P0DP03 117 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 C11orf72Q8NBR9 251 aa9.65□□□□□ -0.86
UBA3-201ENST00000349511 NOTCH1P46531 2555 aa9.65□□□□□ -0.87
UBA3-201ENST00000349511 LOC107984156A0A0G2JMH3 177 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 PSMB2P49721 201 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 NFE4Q86UQ8 179 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 ARL17AQ8IVW1 177 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 SLC25A29Q8N8R3 303 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 CSNK1G2-AS1Q8NCQ2 148 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 AMELXQ99217 191 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 J3QQQ9 107 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 SIGMAR1Q99720 223 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
UBA3-201ENST00000349511 NACAE9PAV3 2078 aa9.63□□□□□ -0.87
UBA3-201ENST00000349511 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms