RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 F8VRH5 84 aa10.23□□□□□ -0.77
TRIM4-201ENST00000349062 ZNF580Q9UK33 172 aa10.23□□□□□ -0.77
TRIM4-201ENST00000349062 LGALS9O00182 355 aa10.22□□□□□ -0.77
TRIM4-201ENST00000349062 PLNP26678 52 aa10.22□□□□□ -0.77
TRIM4-201ENST00000349062 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
TRIM4-201ENST00000349062 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
TRIM4-201ENST00000349062 TMEM89A2RUT3 159 aa10.22□□□□□ -0.77
TRIM4-201ENST00000349062 ORMDL2Q53FV1 153 aa10.22□□□□□ -0.77
TRIM4-201ENST00000349062 NSD1Q96L73 2696 aaPredicted RBP10.21□□□□□ -0.77
TRIM4-201ENST00000349062 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.77
TRIM4-201ENST00000349062 FOXI1Q12951 378 aa10.21□□□□□ -0.77
TRIM4-201ENST00000349062 IGHV4-4A0A075B6R2 117 aa10.21□□□□□ -0.78
TRIM4-201ENST00000349062 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
TRIM4-201ENST00000349062 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
TRIM4-201ENST00000349062 LINC00315P59091 139 aa10.19□□□□□ -0.78
TRIM4-201ENST00000349062 Q1RN00 199 aa10.19□□□□□ -0.78
TRIM4-201ENST00000349062 MORN3Q6PF18 240 aaPredicted RBP10.19□□□□□ -0.78
TRIM4-201ENST00000349062 INAFM1C9JVW0 142 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 CRYGDP07320 174 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 MAST4O15021 2626 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 TRBV7-3A0A075B6L6 115 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 TMEM238LA0A1B0GVL6 79 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 A6NJY4 79 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 KRTAP1-1Q07627 177 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 BAALCQ8WXS3 180 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 SPATA25Q9BR10 227 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 KIF25-AS1Q9Y6Z4 181 aa10.18□□□□□ -0.78
TRIM4-201ENST00000349062 VCYO14598 125 aa10.17□□□□□ -0.78
TRIM4-201ENST00000349062 PF4P02776 101 aa10.17□□□□□ -0.78
TRIM4-201ENST00000349062 Q6ZSN1 163 aa10.17□□□□□ -0.78
TRIM4-201ENST00000349062 TNFRSF18Q9Y5U5 241 aa10.17□□□□□ -0.78
TRIM4-201ENST00000349062 STAB1Q9NY15 2570 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 LY6G6DO95868 133 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 SCGB1A1P11684 91 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 XGP55808 180 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 TAL2Q16559 108 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 C1QTNF4Q9BXJ3 329 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 TSPAN13O95857 204 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 SMCPP49901 116 aaPredicted RBP10.16□□□□□ -0.78
TRIM4-201ENST00000349062 PRO0461Q9UI25 63 aa10.16□□□□□ -0.78
TRIM4-201ENST00000349062 M0QY20 66 aa10.15□□□□□ -0.78
TRIM4-201ENST00000349062 C9orf85Q96MD7 179 aa10.15□□□□□ -0.78
TRIM4-201ENST00000349062 PRSS47A8MTI9 375 aa10.15□□□□□ -0.78
TRIM4-201ENST00000349062 Q8N2B8 174 aa10.15□□□□□ -0.78
TRIM4-201ENST00000349062 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
TRIM4-201ENST00000349062 RNF183Q96D59 192 aa10.15□□□□□ -0.78
TRIM4-201ENST00000349062 INSP01308 110 aa10.15□□□□□ -0.79
TRIM4-201ENST00000349062 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.79
TRIM4-201ENST00000349062 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.14□□□□□ -0.79
TRIM4-201ENST00000349062 IGKV2-29A2NJV5 120 aaPredicted RBP10.14□□□□□ -0.79
TRIM4-201ENST00000349062 RNF152Q8N8N0 203 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 ANAPC13Q9BS18 74 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 TCL1BO95988 128 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 ADARB2-AS1A8MUL3 147 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 A8MWV9 139 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 C9JAW5 83 aa10.14□□□□□ -0.79
TRIM4-201ENST00000349062 TRBV7-9A0A0J9YWB2 115 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 ZNF415Q09FC8 603 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 PRSS2P07478 247 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 FHL3Q13643 280 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 Q6ZUT4 128 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 CDIP1Q9H305 208 aa10.13□□□□□ -0.79
TRIM4-201ENST00000349062 NOP10Q9NPE3 64 aaKnown RBP10.13□□□□□ -0.79
TRIM4-201ENST00000349062 TRBV20-1A0A075B6N2 111 aa10.12□□□□□ -0.79
TRIM4-201ENST00000349062 MED14OSP0DP75 135 aa10.12□□□□□ -0.79
TRIM4-201ENST00000349062 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
TRIM4-201ENST00000349062 NEXN-AS1Q8NBZ9 246 aa10.12□□□□□ -0.79
TRIM4-201ENST00000349062 PPP1R17O96001 155 aa10.12□□□□□ -0.79
TRIM4-201ENST00000349062 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
TRIM4-201ENST00000349062 HERVK_113P61574 105 aa10.12□□□□□ -0.79
TRIM4-201ENST00000349062 Q6ZTI0 123 aa10.12□□□□□ -0.79
TRIM4-201ENST00000349062 GAGE7O76087 117 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 TSHBP01222 138 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 NPC2P61916 151 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 B5MCH6 92 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 M0R2P5 195 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 NOTCH1P46531 2555 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 TRGV2A0A075B6R0 118 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 ANKRD29Q8N6D5 301 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 TEX29Q8N6K0 151 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 ZNRF2Q8NHG8 242 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 PPDPFLQ8WWR9 84 aa10.11□□□□□ -0.79
TRIM4-201ENST00000349062 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
TRIM4-201ENST00000349062 LGALS3P17931 250 aaKnown RBP10.1□□□□□ -0.79
TRIM4-201ENST00000349062 CARD19Q96LW7 228 aa10.1□□□□□ -0.79
TRIM4-201ENST00000349062 SPXQ9BT56 116 aa10.1□□□□□ -0.79
TRIM4-201ENST00000349062 TMEM86BQ8N661 226 aa10.1□□□□□ -0.79
TRIM4-201ENST00000349062 VCX2Q9H322 139 aa10.1□□□□□ -0.79
TRIM4-201ENST00000349062 DEFB4AO15263 64 aa10.09□□□□□ -0.79
TRIM4-201ENST00000349062 DGAT2L7PQ6IED9 249 aa10.09□□□□□ -0.79
TRIM4-201ENST00000349062 NDUFA11Q86Y39 141 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms