RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 SLC25A29Q8N8R3 303 aa10.78□□□□□ -0.68
SMTN-202ENST00000347557 PPDPFLQ8WWR9 84 aa10.78□□□□□ -0.68
SMTN-202ENST00000347557 PRO1854Q9UHT4 67 aa10.78□□□□□ -0.68
SMTN-202ENST00000347557 TRPT1Q86TN4 253 aaKnown RBP10.78□□□□□ -0.68
SMTN-202ENST00000347557 B4DSR2 109 aa10.78□□□□□ -0.68
SMTN-202ENST00000347557 K7EMT4 169 aa10.78□□□□□ -0.68
SMTN-202ENST00000347557 CD28P10747 220 aa10.78□□□□□ -0.68
SMTN-202ENST00000347557 C3orf56Q8N813 242 aa10.78□□□□□ -0.68
SMTN-202ENST00000347557 PTPN13Q12923 2485 aa10.77□□□□□ -0.68
SMTN-202ENST00000347557 PSMB8P28062 276 aa10.77□□□□□ -0.69
SMTN-202ENST00000347557 C9orf85Q96MD7 179 aa10.77□□□□□ -0.69
SMTN-202ENST00000347557 SPANXA1Q9NS26 97 aa10.77□□□□□ -0.69
SMTN-202ENST00000347557 Q9UF83 564 aa10.77□□□□□ -0.69
SMTN-202ENST00000347557 MUSTN1Q8IVN3 82 aa10.77□□□□□ -0.69
SMTN-202ENST00000347557 C10orf126Q8N4M7 172 aa10.77□□□□□ -0.69
SMTN-202ENST00000347557 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
SMTN-202ENST00000347557 SONP18583 2426 aaKnown RBP10.76□□□□□ -0.69
SMTN-202ENST00000347557 TRAV8-3A0A0A6YYJ7 113 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 I3L3M4 83 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 DEFB131AP59861 70 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 LYRM7Q5U5X0 104 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 POM121L12Q8N7R1 296 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 TMEM126AQ9H061 195 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 C9JAW5 83 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 K7EQG2 157 aa10.76□□□□□ -0.69
SMTN-202ENST00000347557 A8MWV9 139 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 A8MZ25 164 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 HOXD3P31249 432 aaPredicted RBP10.75□□□□□ -0.69
SMTN-202ENST00000347557 C20orf203Q8NBC4 194 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 DNAJC30Q96LL9 226 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 ABCA12Q86UK0 2595 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
SMTN-202ENST00000347557 CFHR3Q02985 330 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 DOPEY1Q5JWR5 2465 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 ANKRD17O75179 2603 aaKnown RBP10.75□□□□□ -0.69
SMTN-202ENST00000347557 UBE2D3P61077 147 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 UBE2D2P62837 147 aa10.75□□□□□ -0.69
SMTN-202ENST00000347557 LRRK2Q5S007 2527 aa10.74□□□□□ -0.69
SMTN-202ENST00000347557 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
SMTN-202ENST00000347557 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
SMTN-202ENST00000347557 IGLV4-3A0A075B6K6 122 aa10.74□□□□□ -0.69
SMTN-202ENST00000347557 TMEM262E9PQX1 116 aa10.74□□□□□ -0.69
SMTN-202ENST00000347557 CRLF1O75462 422 aa10.74□□□□□ -0.69
SMTN-202ENST00000347557 TEN1Q86WV5 123 aa10.74□□□□□ -0.69
SMTN-202ENST00000347557 TRBV6-5A0A0K0K1A5 114 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 TMEM223A0PJW6 202 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 SNCGO76070 127 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 SLURP1P55000 103 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 ANKRD29Q8N6D5 301 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 LEPROTO15243 131 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 RBMY1A1P0DJD3 496 aaKnown RBP10.73□□□□□ -0.69
SMTN-202ENST00000347557 RBMY1CP0DJD4 496 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 RBMY1FQ15415 496 aaKnown RBP10.73□□□□□ -0.69
SMTN-202ENST00000347557 AMELXQ99217 191 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 IGHV3OR16-12A0A075B7B8 117 aa10.73□□□□□ -0.69
SMTN-202ENST00000347557 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.72□□□□□ -0.69
SMTN-202ENST00000347557 IGKV2-29A2NJV5 120 aaPredicted RBP10.72□□□□□ -0.69
SMTN-202ENST00000347557 RHOHQ15669 191 aa10.72□□□□□ -0.69
SMTN-202ENST00000347557 TIMM21Q9BVV7 248 aa10.72□□□□□ -0.69
SMTN-202ENST00000347557 NAV2Q8IVL1 2488 aa10.72□□□□□ -0.69
SMTN-202ENST00000347557 PIEZO1Q92508 2521 aa10.72□□□□□ -0.69
SMTN-202ENST00000347557 NSUN5P1Q3KNT7 163 aa10.71□□□□□ -0.69
SMTN-202ENST00000347557 TRGV11A0A075B6L2 103 aa10.71□□□□□ -0.69
SMTN-202ENST00000347557 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
SMTN-202ENST00000347557 IGHV3-30-3P0DP02 117 aa10.71□□□□□ -0.7
SMTN-202ENST00000347557 SLC25A20O43772 301 aa10.7□□□□□ -0.7
SMTN-202ENST00000347557 LINC01587Q99440 93 aa10.7□□□□□ -0.7
SMTN-202ENST00000347557 PRORYQ9H606 182 aa10.7□□□□□ -0.7
SMTN-202ENST00000347557 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
SMTN-202ENST00000347557 EIF4EBP3O60516 100 aaPredicted RBP10.7□□□□□ -0.7
SMTN-202ENST00000347557 Q6ZSV7 163 aa10.7□□□□□ -0.7
SMTN-202ENST00000347557 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
SMTN-202ENST00000347557 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
SMTN-202ENST00000347557 ELANEP08246 267 aa10.69□□□□□ -0.7
SMTN-202ENST00000347557 DAND5Q8N907 189 aa10.69□□□□□ -0.7
SMTN-202ENST00000347557 A0A0J9YXY3 114 aa10.69□□□□□ -0.7
SMTN-202ENST00000347557 Q6Q795 121 aa10.69□□□□□ -0.7
SMTN-202ENST00000347557 Q6ZSN1 163 aa10.69□□□□□ -0.7
SMTN-202ENST00000347557 C11orf44Q8N8P7 122 aa10.69□□□□□ -0.7
SMTN-202ENST00000347557 MRPL23Q16540 153 aaKnown RBP10.68□□□□□ -0.7
SMTN-202ENST00000347557 CCDC168Q8NDH2 2452 aa10.68□□□□□ -0.7
SMTN-202ENST00000347557 LINC01356Q8N9X3 169 aa10.67□□□□□ -0.7
SMTN-202ENST00000347557 TMEM263Q8WUH6 116 aaKnown RBP10.67□□□□□ -0.7
SMTN-202ENST00000347557 ZNF625Q96I27 306 aaPredicted RBP10.67□□□□□ -0.7
SMTN-202ENST00000347557 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
SMTN-202ENST00000347557 EPG5Q9HCE0 2579 aa10.67□□□□□ -0.7
SMTN-202ENST00000347557 MXRA5Q9NR99 2828 aa10.67□□□□□ -0.7
SMTN-202ENST00000347557 NTN5Q8WTR8 489 aaPredicted RBP10.67□□□□□ -0.7
SMTN-202ENST00000347557 IGSF10Q6WRI0 2623 aa10.66□□□□□ -0.7
SMTN-202ENST00000347557 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
SMTN-202ENST00000347557 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
SMTN-202ENST00000347557 ADAMTSL4-AS1Q5T5F5 129 aa10.66□□□□□ -0.7
SMTN-202ENST00000347557 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
SMTN-202ENST00000347557 DYNLRB2Q8TF09 96 aa10.65□□□□□ -0.7
SMTN-202ENST00000347557 JMJD1CQ15652 2540 aa10.65□□□□□ -0.71
SMTN-202ENST00000347557 ZNF462Q96JM2 2506 aa10.65□□□□□ -0.71
SMTN-202ENST00000347557 UBE2E2Q96LR5 201 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms