RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SDHAF1A6NFY7 115 aa14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 RPS10P46783 165 aaKnown RBP14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 COTL1Q14019 142 aa14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 ELOBQ15370 118 aa14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 NIT1Q86X76 327 aa14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 Q8N3U1 123 aa14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 IGHV1-24A0A0C4DH33 117 aa14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 CKS2P33552 79 aa14.1□□□□□ -0.15
SMARCB1-202ENST00000344921 S100A2P29034 98 aa14.09□□□□□ -0.15
SMARCB1-202ENST00000344921 LINC00336Q6ZUF6 198 aa14.09□□□□□ -0.15
SMARCB1-202ENST00000344921 DNAH2Q9P225 4427 aa14.09□□□□□ -0.15
SMARCB1-202ENST00000344921 PPP1R17O96001 155 aa14.08□□□□□ -0.16
SMARCB1-202ENST00000344921 TRBV6-5A0A0K0K1A5 114 aa14.07□□□□□ -0.16
SMARCB1-202ENST00000344921 BTF3P20290 206 aaKnown RBP14.07□□□□□ -0.16
SMARCB1-202ENST00000344921 PMCHP20382 165 aa14.07□□□□□ -0.16
SMARCB1-202ENST00000344921 PRSS29PA6NIE9 313 aa14.07□□□□□ -0.16
SMARCB1-202ENST00000344921 IQCJQ1A5X6 159 aa14.07□□□□□ -0.16
SMARCB1-202ENST00000344921 I3L3M4 83 aa14.06□□□□□ -0.16
SMARCB1-202ENST00000344921 AMTP48728 403 aa14.06□□□□□ -0.16
SMARCB1-202ENST00000344921 GAGE6Q13070 117 aa14.06□□□□□ -0.16
SMARCB1-202ENST00000344921 TMEM243Q9BU79 118 aa14.06□□□□□ -0.16
SMARCB1-202ENST00000344921 IBA57-AS1B1ANH7 110 aa14.05□□□□□ -0.16
SMARCB1-202ENST00000344921 D6R8Y8 96 aa14.05□□□□□ -0.16
SMARCB1-202ENST00000344921 PKIAP61925 76 aa14.05□□□□□ -0.16
SMARCB1-202ENST00000344921 NFE4Q86UQ8 179 aa14.05□□□□□ -0.16
SMARCB1-202ENST00000344921 TMEM70Q9BUB7 260 aa14.05□□□□□ -0.16
SMARCB1-202ENST00000344921 CHCHD7Q9BUK0 85 aa14.05□□□□□ -0.16
SMARCB1-202ENST00000344921 Q9HAA7 133 aa14.05□□□□□ -0.16
SMARCB1-202ENST00000344921 TRBV24-1A0A075B6N3 115 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 TRAV9-1A0A075B6T8 112 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 UBE2L6O14933 153 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 NRACQ8N912 160 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 FRAS1Q86XX4 4008 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 DNAH10Q8IVF4 4471 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 SUMO2P61956 95 aaKnown RBP14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 MPV17L2Q567V2 206 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 KLK12Q9UKR0 248 aa14.04□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BKO60814 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 APCSP02743 223 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 PPBPP02775 128 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BJP06899 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BOP23527 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BBP33778 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BDP58876 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BCP62807 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST2H2BEQ16778 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 LINC00469Q8N7U9 141 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BHQ93079 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BNQ99877 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 HIST1H2BMQ99879 126 aa14.03□□□□□ -0.16
SMARCB1-202ENST00000344921 POLR2KP53803 58 aaKnown RBP14.02□□□□□ -0.16
SMARCB1-202ENST00000344921 ORMDL3Q8N138 153 aa14.02□□□□□ -0.16
SMARCB1-202ENST00000344921 VCYO14598 125 aa14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 TNFRSF6BO95407 300 aa14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 NDUFA6P56556 154 aa14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 LAGE3Q14657 143 aa14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 TMEM136Q6ZRR5 245 aa14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 Q8N976 141 aa14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 ANGP03950 147 aaKnown RBP14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 PYY3Q5JQD4 70 aa14.01□□□□□ -0.17
SMARCB1-202ENST00000344921 TRBV27A0A0K0K1C4 114 aa14□□□□□ -0.17
SMARCB1-202ENST00000344921 TNP2Q05952 138 aa14□□□□□ -0.17
SMARCB1-202ENST00000344921 C20orf78Q9BR46 151 aa14□□□□□ -0.17
SMARCB1-202ENST00000344921 TRAV8-3A0A0A6YYJ7 113 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 IFITM10A6NMD0 228 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 FCER1GP30273 86 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 RBX1P62877 108 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 HIST3H2BBQ8N257 126 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 UBE2WQ96B02 151 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 PRELID3AQ96N28 172 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 KIR2DL4Q99706 377 aa13.99□□□□□ -0.17
SMARCB1-202ENST00000344921 TGIF2-C20orf24A0A0A6YYL0 155 aa13.98□□□□□ -0.17
SMARCB1-202ENST00000344921 PSCAO43653 123 aa13.98□□□□□ -0.17
SMARCB1-202ENST00000344921 NPYP01303 97 aa13.98□□□□□ -0.17
SMARCB1-202ENST00000344921 Q6ZRN7 208 aaPredicted RBP13.98□□□□□ -0.17
SMARCB1-202ENST00000344921 TSHBP01222 138 aa13.98□□□□□ -0.17
SMARCB1-202ENST00000344921 CRPP02741 224 aa13.98□□□□□ -0.17
SMARCB1-202ENST00000344921 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.97□□□□□ -0.17
SMARCB1-202ENST00000344921 IGKV2-29A2NJV5 120 aaPredicted RBP13.97□□□□□ -0.17
SMARCB1-202ENST00000344921 TRGC2P03986 189 aa13.97□□□□□ -0.17
SMARCB1-202ENST00000344921 PHOX2AO14813 284 aa13.96□□□□□ -0.17
SMARCB1-202ENST00000344921 AMMECR1LQ6DCA0 310 aa13.96□□□□□ -0.17
SMARCB1-202ENST00000344921 HLA-DQA1P01909 254 aa13.95□□□□□ -0.18
SMARCB1-202ENST00000344921 Q0VG73 95 aa13.95□□□□□ -0.18
SMARCB1-202ENST00000344921 COA6Q5JTJ3 125 aaKnown RBP13.95□□□□□ -0.18
SMARCB1-202ENST00000344921 RNASEKQ6P5S7 137 aaKnown RBP13.95□□□□□ -0.18
SMARCB1-202ENST00000344921 OR10D4PQ8NGN7 298 aa13.95□□□□□ -0.18
SMARCB1-202ENST00000344921 TM2D2Q9BX73 214 aa13.95□□□□□ -0.18
SMARCB1-202ENST00000344921 GNB1LQ9BYB4 327 aa13.95□□□□□ -0.18
SMARCB1-202ENST00000344921 A0A1B0GUV1 79 aa13.94□□□□□ -0.18
SMARCB1-202ENST00000344921 COX19Q49B96 90 aa13.94□□□□□ -0.18
SMARCB1-202ENST00000344921 CLPSL2Q6UWE3 100 aa13.94□□□□□ -0.18
SMARCB1-202ENST00000344921 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
SMARCB1-202ENST00000344921 RMI2Q96E14 147 aa13.94□□□□□ -0.18
SMARCB1-202ENST00000344921 SMIM2Q9BVW6 85 aa13.94□□□□□ -0.18
SMARCB1-202ENST00000344921 LAMTOR2Q9Y2Q5 125 aa13.94□□□□□ -0.18
SMARCB1-202ENST00000344921 H7C423 109 aa13.93□□□□□ -0.18
SMARCB1-202ENST00000344921 RPL32P62910 135 aaKnown RBP13.93□□□□□ -0.18
SMARCB1-202ENST00000344921 FAT2Q9NYQ8 4349 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms