RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
CEACAM3-201ENST00000344550 CEBPGP53567 150 aa13.1□□□□□ -0.31
CEACAM3-201ENST00000344550 REG3AQ06141 175 aa13.1□□□□□ -0.31
CEACAM3-201ENST00000344550 TSKUQ8WUA8 353 aa13.1□□□□□ -0.31
CEACAM3-201ENST00000344550 H7C423 109 aa13.09□□□□□ -0.31
CEACAM3-201ENST00000344550 UBE2L6O14933 153 aa13.09□□□□□ -0.31
CEACAM3-201ENST00000344550 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
CEACAM3-201ENST00000344550 AMTP48728 403 aa13.09□□□□□ -0.31
CEACAM3-201ENST00000344550 CLRN3Q8NCR9 226 aa13.09□□□□□ -0.31
CEACAM3-201ENST00000344550 SMDT1Q9H4I9 107 aa13.09□□□□□ -0.31
CEACAM3-201ENST00000344550 SMR3BP02814 79 aaPredicted RBP13.08□□□□□ -0.32
CEACAM3-201ENST00000344550 KRTAP26-1Q6PEX3 210 aa13.08□□□□□ -0.32
CEACAM3-201ENST00000344550 C20orf203Q8NBC4 194 aa13.08□□□□□ -0.32
CEACAM3-201ENST00000344550 FAT1Q14517 4588 aa13.08□□□□□ -0.32
CEACAM3-201ENST00000344550 TRBV6-5A0A0K0K1A5 114 aa13.07□□□□□ -0.32
CEACAM3-201ENST00000344550 A0A1B0GUT8 65 aa13.07□□□□□ -0.32
CEACAM3-201ENST00000344550 USP17L23D6RBM5 183 aa13.07□□□□□ -0.32
CEACAM3-201ENST00000344550 SRRM2Q9UQ35 2752 aaKnown RBP13.06□□□□□ -0.32
CEACAM3-201ENST00000344550 A0A1B0GVG6 124 aa13.06□□□□□ -0.32
CEACAM3-201ENST00000344550 HLA-DQA1P01909 254 aa13.06□□□□□ -0.32
CEACAM3-201ENST00000344550 TMEM191AQ9H0A3 160 aa13.06□□□□□ -0.32
CEACAM3-201ENST00000344550 HIGD1CA8MV81 97 aa13.05□□□□□ -0.32
CEACAM3-201ENST00000344550 TMEM241Q24JQ0 296 aa13.05□□□□□ -0.32
CEACAM3-201ENST00000344550 CHAC1Q9BUX1 264 aa13.05□□□□□ -0.32
CEACAM3-201ENST00000344550 TRAV26-2A0A0B4J265 109 aa13.04□□□□□ -0.32
CEACAM3-201ENST00000344550 PLA2G1BP04054 148 aaKnown RBP13.04□□□□□ -0.32
CEACAM3-201ENST00000344550 IGLV4-60A0A075B6I1 120 aa13.03□□□□□ -0.32
CEACAM3-201ENST00000344550 SDHAF1A6NFY7 115 aa13.03□□□□□ -0.32
CEACAM3-201ENST00000344550 CLPSL2Q6UWE3 100 aa13.03□□□□□ -0.32
CEACAM3-201ENST00000344550 DNAH8Q96JB1 4490 aa13.02□□□□□ -0.32
CEACAM3-201ENST00000344550 I3L3M4 83 aa13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 PPP1R17O96001 155 aa13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 PRSS1P07477 247 aa13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 HAMPP81172 84 aa13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 PEA15Q15121 130 aa13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 C9orf163Q8N9P6 203 aa13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 RPL39LQ96EH5 51 aaKnown RBP13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 MRAP2Q96G30 205 aa13.02□□□□□ -0.33
CEACAM3-201ENST00000344550 APCSP02743 223 aa13.01□□□□□ -0.33
CEACAM3-201ENST00000344550 ZNF25P17030 456 aaPredicted RBP13.01□□□□□ -0.33
CEACAM3-201ENST00000344550 RIGQ13278 110 aa13.01□□□□□ -0.33
CEACAM3-201ENST00000344550 ISOC2Q96AB3 205 aa13.01□□□□□ -0.33
CEACAM3-201ENST00000344550 V9GYV3 84 aa13.01□□□□□ -0.33
CEACAM3-201ENST00000344550 VPS13BQ7Z7G8 4022 aa13□□□□□ -0.33
CEACAM3-201ENST00000344550 LINC01620Q4KN68 170 aa13□□□□□ -0.33
CEACAM3-201ENST00000344550 AMMECR1LQ6DCA0 310 aa13□□□□□ -0.33
CEACAM3-201ENST00000344550 SCXQ7RTU7 201 aa13□□□□□ -0.33
CEACAM3-201ENST00000344550 ST20Q9HBF5 79 aa13□□□□□ -0.33
CEACAM3-201ENST00000344550 NAT8Q9UHE5 227 aa13□□□□□ -0.33
CEACAM3-201ENST00000344550 PMCHP20382 165 aa12.99□□□□□ -0.33
CEACAM3-201ENST00000344550 CNBPP62633 177 aaKnown RBP12.99□□□□□ -0.33
CEACAM3-201ENST00000344550 NAT8BQ9UHF3 227 aa12.99□□□□□ -0.33
CEACAM3-201ENST00000344550 IGLV10-54A0A075B6I4 117 aa12.98□□□□□ -0.33
CEACAM3-201ENST00000344550 RAB4AP20338 218 aa12.98□□□□□ -0.33
CEACAM3-201ENST00000344550 RPL23P62829 140 aaKnown RBP12.98□□□□□ -0.33
CEACAM3-201ENST00000344550 CFAP161Q6P656 301 aa12.98□□□□□ -0.33
CEACAM3-201ENST00000344550 LINC00528Q8N1L1 170 aa12.98□□□□□ -0.33
CEACAM3-201ENST00000344550 DMBT1Q9UGM3 2413 aaPredicted RBP12.97□□□□□ -0.33
CEACAM3-201ENST00000344550 TRBV27A0A0K0K1C4 114 aa12.97□□□□□ -0.33
CEACAM3-201ENST00000344550 A0A1B0GW15 77 aa12.97□□□□□ -0.33
CEACAM3-201ENST00000344550 NUP35Q8NFH5 326 aa12.97□□□□□ -0.33
CEACAM3-201ENST00000344550 CIRBP-AS1Q8TBR5 109 aa12.97□□□□□ -0.33
CEACAM3-201ENST00000344550 FGF6P10767 208 aa12.96□□□□□ -0.33
CEACAM3-201ENST00000344550 ESDP10768 282 aa12.96□□□□□ -0.33
CEACAM3-201ENST00000344550 POLR2KP53803 58 aaKnown RBP12.96□□□□□ -0.33
CEACAM3-201ENST00000344550 RNF185Q96GF1 192 aa12.96□□□□□ -0.33
CEACAM3-201ENST00000344550 AP5S1Q9NUS5 200 aa12.96□□□□□ -0.33
CEACAM3-201ENST00000344550 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.95□□□□□ -0.34
CEACAM3-201ENST00000344550 TMEM101Q96IK0 257 aa12.95□□□□□ -0.34
CEACAM3-201ENST00000344550 BTF3L4Q96K17 158 aa12.95□□□□□ -0.34
CEACAM3-201ENST00000344550 SMIM27A0A1W2PRY6 76 aa12.94□□□□□ -0.34
CEACAM3-201ENST00000344550 hDV102S1A0JD36 115 aa12.94□□□□□ -0.34
CEACAM3-201ENST00000344550 ADIRFQ15847 76 aa12.94□□□□□ -0.34
CEACAM3-201ENST00000344550 RNASEKQ6P5S7 137 aaKnown RBP12.94□□□□□ -0.34
CEACAM3-201ENST00000344550 DEFB104AQ8WTQ1 72 aa12.94□□□□□ -0.34
CEACAM3-201ENST00000344550 C9JQL5 133 aa12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 VCYO14598 125 aa12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 TSHBP01222 138 aa12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 SMAGPQ0VAQ4 97 aa12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 SDIM1Q6ZPB5 146 aa12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 MRPL52Q86TS9 123 aaKnown RBP12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 AMN1Q8IY45 258 aa12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 FLG2Q5D862 2391 aaPredicted RBP12.93□□□□□ -0.34
CEACAM3-201ENST00000344550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.92□□□□□ -0.34
CEACAM3-201ENST00000344550 IGKV2-29A2NJV5 120 aaPredicted RBP12.92□□□□□ -0.34
CEACAM3-201ENST00000344550 LINC00862A6NCI5 91 aa12.92□□□□□ -0.34
CEACAM3-201ENST00000344550 PPP1R2P9O14990 202 aa12.92□□□□□ -0.34
CEACAM3-201ENST00000344550 S100A8P05109 93 aa12.91□□□□□ -0.34
CEACAM3-201ENST00000344550 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
CEACAM3-201ENST00000344550 GAS8-AS1O95177 125 aa12.9□□□□□ -0.34
CEACAM3-201ENST00000344550 RPS10P46783 165 aaKnown RBP12.9□□□□□ -0.34
CEACAM3-201ENST00000344550 FAM104BQ5XKR9 115 aa12.9□□□□□ -0.34
CEACAM3-201ENST00000344550 CHCHD10Q8WYQ3 142 aaPredicted RBP12.9□□□□□ -0.34
CEACAM3-201ENST00000344550 CSDC2Q9Y534 153 aaKnown RBP12.9□□□□□ -0.34
CEACAM3-201ENST00000344550 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 C7orf77A4D0Y5 90 aa12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 TCAPO15273 167 aa12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 SUMO2P61956 95 aaKnown RBP12.89□□□□□ -0.35
CEACAM3-201ENST00000344550 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms