RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 VSIG2Q96IQ7 327 aa11.45□□□□□ -0.58
CEACAM1-202ENST00000344391 IGHV3-38A0A0C4DH36 116 aa11.44□□□□□ -0.58
CEACAM1-202ENST00000344391 PHLDA1Q8WV24 401 aaPredicted RBP11.44□□□□□ -0.58
CEACAM1-202ENST00000344391 TRAV26-1A0A087WT03 109 aa11.43□□□□□ -0.58
CEACAM1-202ENST00000344391 NUDT3O95989 172 aa11.43□□□□□ -0.58
CEACAM1-202ENST00000344391 GYPEP15421 78 aa11.43□□□□□ -0.58
CEACAM1-202ENST00000344391 DAZ4Q86SG3 579 aaKnown RBP11.43□□□□□ -0.58
CEACAM1-202ENST00000344391 DAZ3Q9NR90 486 aaKnown RBP11.43□□□□□ -0.58
CEACAM1-202ENST00000344391 A0A0J9YY99 117 aa11.42□□□□□ -0.58
CEACAM1-202ENST00000344391 LEPROTL1O95214 131 aa11.42□□□□□ -0.58
CEACAM1-202ENST00000344391 OR10D4PQ8NGN7 298 aa11.42□□□□□ -0.58
CEACAM1-202ENST00000344391 BTF3P20290 206 aaKnown RBP11.41□□□□□ -0.58
CEACAM1-202ENST00000344391 COTL1Q14019 142 aa11.41□□□□□ -0.58
CEACAM1-202ENST00000344391 AKR1D1P51857 326 aa11.4□□□□□ -0.58
CEACAM1-202ENST00000344391 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
CEACAM1-202ENST00000344391 G0S2P27469 103 aa11.39□□□□□ -0.59
CEACAM1-202ENST00000344391 C2orf66Q6UXQ4 117 aa11.39□□□□□ -0.59
CEACAM1-202ENST00000344391 TOMM6Q96B49 74 aa11.39□□□□□ -0.59
CEACAM1-202ENST00000344391 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 C20orf203Q8NBC4 194 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 ATP6V0E2Q8NHE4 81 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 CHCHD7Q9BUK0 85 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 GTSF1LQ9H1H1 148 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 H3BNG1 76 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
CEACAM1-202ENST00000344391 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
CEACAM1-202ENST00000344391 RPL39P62891 51 aaKnown RBP11.37□□□□□ -0.59
CEACAM1-202ENST00000344391 LINC01549A6NIU2 74 aa11.36□□□□□ -0.59
CEACAM1-202ENST00000344391 C3orf79P0CE67 100 aa11.36□□□□□ -0.59
CEACAM1-202ENST00000344391 CTAG1AP78358 180 aa11.36□□□□□ -0.59
CEACAM1-202ENST00000344391 MRPL23Q16540 153 aaKnown RBP11.36□□□□□ -0.59
CEACAM1-202ENST00000344391 ICOSQ9Y6W8 199 aa11.36□□□□□ -0.59
CEACAM1-202ENST00000344391 A0A096LPF7 62 aa11.35□□□□□ -0.59
CEACAM1-202ENST00000344391 FBN3Q75N90 2809 aa11.35□□□□□ -0.59
CEACAM1-202ENST00000344391 KRTDAPP60985 99 aa11.35□□□□□ -0.59
CEACAM1-202ENST00000344391 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
CEACAM1-202ENST00000344391 SCGB3A1Q96QR1 104 aa11.35□□□□□ -0.59
CEACAM1-202ENST00000344391 TRBV6-8A0A0A6YYG3 113 aa11.34□□□□□ -0.59
CEACAM1-202ENST00000344391 ATP5LO75964 103 aa11.34□□□□□ -0.59
CEACAM1-202ENST00000344391 ERASQ7Z444 233 aa11.34□□□□□ -0.59
CEACAM1-202ENST00000344391 SH2D6Q7Z4S9 175 aa11.34□□□□□ -0.59
CEACAM1-202ENST00000344391 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
CEACAM1-202ENST00000344391 MAP1LC3CQ9BXW4 147 aa11.34□□□□□ -0.59
CEACAM1-202ENST00000344391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.33□□□□□ -0.6
CEACAM1-202ENST00000344391 IGKV2-29A2NJV5 120 aaPredicted RBP11.33□□□□□ -0.6
CEACAM1-202ENST00000344391 IGIPA6NJ69 53 aa11.33□□□□□ -0.6
CEACAM1-202ENST00000344391 TRBV25-1A0A075B6N4 114 aa11.32□□□□□ -0.6
CEACAM1-202ENST00000344391 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
CEACAM1-202ENST00000344391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 TMEM243Q9BU79 118 aa11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 DYNC2H1Q8NCM8 4307 aaKnown RBP11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 PYGO1Q9Y3Y4 419 aa11.31□□□□□ -0.6
CEACAM1-202ENST00000344391 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
CEACAM1-202ENST00000344391 SPATA12Q7Z6I5 190 aa11.3□□□□□ -0.6
CEACAM1-202ENST00000344391 UBE2D4Q9Y2X8 147 aa11.3□□□□□ -0.6
CEACAM1-202ENST00000344391 Q8N976 141 aa11.29□□□□□ -0.6
CEACAM1-202ENST00000344391 DNAH7Q8WXX0 4024 aa11.29□□□□□ -0.6
CEACAM1-202ENST00000344391 H0Y8G0 127 aa11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 H7C423 109 aa11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 SCGB1D1O95968 90 aa11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 PRSS1P07477 247 aa11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 Q6ZN92 141 aa11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 TIMM21Q9BVV7 248 aa11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 SPANXA1Q9NS26 97 aa11.28□□□□□ -0.6
CEACAM1-202ENST00000344391 TIRAPP58753 221 aa11.27□□□□□ -0.6
CEACAM1-202ENST00000344391 CEMP1Q6PRD7 247 aaPredicted RBP11.27□□□□□ -0.6
CEACAM1-202ENST00000344391 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.6
CEACAM1-202ENST00000344391 BAALCQ8WXS3 180 aa11.27□□□□□ -0.6
CEACAM1-202ENST00000344391 FAM104AQ969W3 186 aa11.27□□□□□ -0.6
CEACAM1-202ENST00000344391 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.6
CEACAM1-202ENST00000344391 IGLV4-3A0A075B6K6 122 aa11.27□□□□□ -0.61
CEACAM1-202ENST00000344391 UBE2L6O14933 153 aa11.27□□□□□ -0.61
CEACAM1-202ENST00000344391 NPSP0C0P6 89 aa11.27□□□□□ -0.61
CEACAM1-202ENST00000344391 FGF6P10767 208 aa11.27□□□□□ -0.61
CEACAM1-202ENST00000344391 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.61
CEACAM1-202ENST00000344391 CHCHD5Q9BSY4 110 aa11.27□□□□□ -0.61
CEACAM1-202ENST00000344391 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
CEACAM1-202ENST00000344391 LELP1Q5T871 98 aa11.26□□□□□ -0.61
CEACAM1-202ENST00000344391 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
CEACAM1-202ENST00000344391 CSDC2Q9Y534 153 aaKnown RBP11.26□□□□□ -0.61
CEACAM1-202ENST00000344391 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
CEACAM1-202ENST00000344391 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
CEACAM1-202ENST00000344391 GAGE6Q13070 117 aa11.25□□□□□ -0.61
CEACAM1-202ENST00000344391 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
CEACAM1-202ENST00000344391 MRPS36P82909 103 aaKnown RBP11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 ODF1Q14990 250 aa11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 DGAT2L7PQ6IED9 249 aa11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 C20orf202A1L168 122 aa11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 IGLL5B9A064 214 aa11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 PMVKQ15126 192 aa11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 ZC2HC1BQ5TFG8 222 aa11.24□□□□□ -0.61
CEACAM1-202ENST00000344391 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms