RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 RAB37Q96AX2 223 aa13.46□□□□□ -0.25
HOXA9-201ENST00000343483 GIG44P09565 113 aaPredicted RBP13.46□□□□□ -0.26
HOXA9-201ENST00000343483 TIMM17AQ99595 171 aa13.46□□□□□ -0.26
HOXA9-201ENST00000343483 K7EP13 123 aa13.45□□□□□ -0.26
HOXA9-201ENST00000343483 PMVKQ15126 192 aa13.45□□□□□ -0.26
HOXA9-201ENST00000343483 H3BUT2 72 aa13.44□□□□□ -0.26
HOXA9-201ENST00000343483 RHOHQ15669 191 aa13.44□□□□□ -0.26
HOXA9-201ENST00000343483 RNASE8Q8TDE3 154 aaKnown RBP13.44□□□□□ -0.26
HOXA9-201ENST00000343483 MYMXA0A1B0GTQ4 84 aa13.44□□□□□ -0.26
HOXA9-201ENST00000343483 E9PLD3 99 aa13.44□□□□□ -0.26
HOXA9-201ENST00000343483 Q6ZSN1 163 aa13.44□□□□□ -0.26
HOXA9-201ENST00000343483 CEND1Q8N111 149 aa13.44□□□□□ -0.26
HOXA9-201ENST00000343483 CST9LQ9H4G1 147 aa13.44□□□□□ -0.26
HOXA9-201ENST00000343483 IGLV4-69A0A075B6H9 119 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 TRGV1A0A0A0MS02 117 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 I3L3M4 83 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 SMIM13P0DJ93 91 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 NAA38Q9BRA0 125 aaKnown RBP13.43□□□□□ -0.26
HOXA9-201ENST00000343483 PRADC1Q9BSG0 188 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 EDA2RQ9HAV5 297 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 C11orf86A6NJI1 115 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 RHODO00212 210 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 SPATA3Q8NHX4 192 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 TMEM263Q8WUH6 116 aaKnown RBP13.43□□□□□ -0.26
HOXA9-201ENST00000343483 TM2D2Q9BX73 214 aa13.43□□□□□ -0.26
HOXA9-201ENST00000343483 EMP1P54849 157 aa13.42□□□□□ -0.26
HOXA9-201ENST00000343483 PAPPA-AS1Q5QFB9 102 aa13.42□□□□□ -0.26
HOXA9-201ENST00000343483 IL17DQ8TAD2 202 aa13.42□□□□□ -0.26
HOXA9-201ENST00000343483 TNFRSF18Q9Y5U5 241 aa13.42□□□□□ -0.26
HOXA9-201ENST00000343483 TAL2Q16559 108 aa13.41□□□□□ -0.26
HOXA9-201ENST00000343483 C1QTNF4Q9BXJ3 329 aa13.41□□□□□ -0.26
HOXA9-201ENST00000343483 GAGE10A6NGK3 116 aa13.41□□□□□ -0.26
HOXA9-201ENST00000343483 RS1O15537 224 aa13.41□□□□□ -0.26
HOXA9-201ENST00000343483 Q9UF83 564 aa13.41□□□□□ -0.26
HOXA9-201ENST00000343483 KRTAP21-3Q3LHN1 58 aa13.4□□□□□ -0.26
HOXA9-201ENST00000343483 HIST1H4GQ99525 98 aa13.4□□□□□ -0.26
HOXA9-201ENST00000343483 CITED1Q99966 193 aa13.4□□□□□ -0.27
HOXA9-201ENST00000343483 VWFP04275 2813 aa13.39□□□□□ -0.27
HOXA9-201ENST00000343483 K7ERJ3 54 aa13.39□□□□□ -0.27
HOXA9-201ENST00000343483 HERVK_113P61574 105 aa13.39□□□□□ -0.27
HOXA9-201ENST00000343483 Q6ZTI0 123 aa13.39□□□□□ -0.27
HOXA9-201ENST00000343483 GTF2H5Q6ZYL4 71 aa13.39□□□□□ -0.27
HOXA9-201ENST00000343483 C20orf203Q8NBC4 194 aa13.39□□□□□ -0.27
HOXA9-201ENST00000343483 NHP2Q9NX24 153 aaKnown RBP13.39□□□□□ -0.27
HOXA9-201ENST00000343483 IGHV3-53P01767 116 aa13.38□□□□□ -0.27
HOXA9-201ENST00000343483 INSL3P51460 131 aa13.38□□□□□ -0.27
HOXA9-201ENST00000343483 C9orf66Q5T8R8 295 aa13.38□□□□□ -0.27
HOXA9-201ENST00000343483 NOP10Q9NPE3 64 aaKnown RBP13.38□□□□□ -0.27
HOXA9-201ENST00000343483 A0A1W2PPM0 123 aa13.38□□□□□ -0.27
HOXA9-201ENST00000343483 ZNF815PA8K554 130 aa13.38□□□□□ -0.27
HOXA9-201ENST00000343483 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
HOXA9-201ENST00000343483 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
HOXA9-201ENST00000343483 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
HOXA9-201ENST00000343483 TRBV7-3A0A075B6L6 115 aa13.36□□□□□ -0.27
HOXA9-201ENST00000343483 K7EP34 96 aa13.36□□□□□ -0.27
HOXA9-201ENST00000343483 TMEM170BQ5T4T1 132 aa13.36□□□□□ -0.27
HOXA9-201ENST00000343483 SAMD5Q5TGI4 173 aa13.36□□□□□ -0.27
HOXA9-201ENST00000343483 ZNRF2Q8NHG8 242 aa13.36□□□□□ -0.27
HOXA9-201ENST00000343483 ZNF479Q96JC4 524 aa13.36□□□□□ -0.27
HOXA9-201ENST00000343483 NOTCH3Q9UM47 2321 aa13.36□□□□□ -0.27
HOXA9-201ENST00000343483 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
HOXA9-201ENST00000343483 RRN3P1Q2M238 152 aa13.35□□□□□ -0.27
HOXA9-201ENST00000343483 PHLDA1Q8WV24 401 aaPredicted RBP13.35□□□□□ -0.27
HOXA9-201ENST00000343483 GAGE12BA1L429 117 aa13.34□□□□□ -0.27
HOXA9-201ENST00000343483 PLAC8L1A1L4L8 177 aa13.34□□□□□ -0.27
HOXA9-201ENST00000343483 FABP2P12104 132 aa13.34□□□□□ -0.27
HOXA9-201ENST00000343483 DAZ2Q13117 558 aaKnown RBP13.34□□□□□ -0.27
HOXA9-201ENST00000343483 SCGB1D4Q6XE38 83 aa13.34□□□□□ -0.27
HOXA9-201ENST00000343483 PLEKHB2Q96CS7 222 aa13.33□□□□□ -0.27
HOXA9-201ENST00000343483 SPCS1Q9Y6A9 102 aa13.33□□□□□ -0.27
HOXA9-201ENST00000343483 DNAJC30Q96LL9 226 aa13.33□□□□□ -0.28
HOXA9-201ENST00000343483 IGHV3-38A0A0C4DH36 116 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 C12orf74Q32Q52 190 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 ANK2Q01484 3957 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 IGLV4-3A0A075B6K6 122 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 GAGE7O76087 117 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 VCX2Q9H322 139 aa13.32□□□□□ -0.28
HOXA9-201ENST00000343483 TRGV2A0A075B6R0 118 aa13.31□□□□□ -0.28
HOXA9-201ENST00000343483 TRRAPQ9Y4A5 3859 aa13.31□□□□□ -0.28
HOXA9-201ENST00000343483 TMEM238LA0A1B0GVL6 79 aa13.29□□□□□ -0.28
HOXA9-201ENST00000343483 TSPEAR-AS2P59090 65 aa13.29□□□□□ -0.28
HOXA9-201ENST00000343483 OR5A1Q8NGJ0 315 aa13.29□□□□□ -0.28
HOXA9-201ENST00000343483 IGLL5B9A064 214 aa13.28□□□□□ -0.28
HOXA9-201ENST00000343483 K7EQD1 137 aa13.28□□□□□ -0.28
HOXA9-201ENST00000343483 SRSF9Q13242 221 aaKnown RBP eCLIP13.28□□□□□ -0.28
HOXA9-201ENST00000343483 COTL1Q14019 142 aa13.28□□□□□ -0.28
HOXA9-201ENST00000343483 PYGO1Q9Y3Y4 419 aa13.28□□□□□ -0.28
HOXA9-201ENST00000343483 CEMP1Q6PRD7 247 aaPredicted RBP13.27□□□□□ -0.28
HOXA9-201ENST00000343483 SLC25A29Q8N8R3 303 aa13.27□□□□□ -0.28
HOXA9-201ENST00000343483 OVOL2Q9BRP0 275 aa13.27□□□□□ -0.28
HOXA9-201ENST00000343483 CHCHD7Q9BUK0 85 aa13.27□□□□□ -0.28
HOXA9-201ENST00000343483 A0A0J9YXV3 536 aa13.27□□□□□ -0.29
HOXA9-201ENST00000343483 TMEM223A0PJW6 202 aa13.27□□□□□ -0.29
HOXA9-201ENST00000343483 J3QQQ9 107 aa13.27□□□□□ -0.29
HOXA9-201ENST00000343483 LGALS3P17931 250 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms