RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 IGFL3Q6UXB1 125 aa13.59□□□□□ -0.23
SMPD1-201ENST00000342245 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
SMPD1-201ENST00000342245 MGAQ8IWI9 3026 aa13.59□□□□□ -0.23
SMPD1-201ENST00000342245 FAM223BA6NKX1 122 aa13.59□□□□□ -0.23
SMPD1-201ENST00000342245 USP17L23D6RBM5 183 aa13.59□□□□□ -0.23
SMPD1-201ENST00000342245 FAM223AQ8IWN6 122 aa13.59□□□□□ -0.23
SMPD1-201ENST00000342245 IGHV3-16A0A0C4DH30 117 aa13.58□□□□□ -0.23
SMPD1-201ENST00000342245 ZZEF1O43149 2961 aa13.58□□□□□ -0.23
SMPD1-201ENST00000342245 NDUFA4O00483 81 aa13.58□□□□□ -0.24
SMPD1-201ENST00000342245 PF4P02776 101 aa13.58□□□□□ -0.24
SMPD1-201ENST00000342245 FAM104AQ969W3 186 aa13.58□□□□□ -0.24
SMPD1-201ENST00000342245 LYNX1G3V0Z9 82 aa13.57□□□□□ -0.24
SMPD1-201ENST00000342245 LYNX1P0DP58 116 aa13.57□□□□□ -0.24
SMPD1-201ENST00000342245 PRORYQ9H606 182 aa13.56□□□□□ -0.24
SMPD1-201ENST00000342245 F6UB75 175 aa13.55□□□□□ -0.24
SMPD1-201ENST00000342245 RP1L1Q8IWN7 2480 aaPredicted RBP13.55□□□□□ -0.24
SMPD1-201ENST00000342245 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
SMPD1-201ENST00000342245 HIST2H2BCQ6DN03 193 aa13.54□□□□□ -0.24
SMPD1-201ENST00000342245 HIST2H2BDQ6DRA6 164 aa13.54□□□□□ -0.24
SMPD1-201ENST00000342245 EPM2AB3EWF7 344 aa13.54□□□□□ -0.24
SMPD1-201ENST00000342245 PSMB8P28062 276 aa13.54□□□□□ -0.24
SMPD1-201ENST00000342245 PFN2P35080 140 aa13.54□□□□□ -0.24
SMPD1-201ENST00000342245 A8MZ25 164 aa13.53□□□□□ -0.24
SMPD1-201ENST00000342245 DEFB1P60022 68 aa13.53□□□□□ -0.24
SMPD1-201ENST00000342245 LINC01561Q8N1V8 128 aa13.53□□□□□ -0.24
SMPD1-201ENST00000342245 IGKV3D-7A0A0C4DH55 119 aa13.53□□□□□ -0.24
SMPD1-201ENST00000342245 RPL28P46779 137 aaKnown RBP13.53□□□□□ -0.24
SMPD1-201ENST00000342245 S100A7L2Q5SY68 101 aa13.53□□□□□ -0.24
SMPD1-201ENST00000342245 OBSCN-AS1Q96MR7 158 aa13.53□□□□□ -0.24
SMPD1-201ENST00000342245 G3V318 75 aa13.52□□□□□ -0.24
SMPD1-201ENST00000342245 Q8N2B8 174 aa13.52□□□□□ -0.24
SMPD1-201ENST00000342245 TRAV13-2A0A0B4J235 113 aa13.52□□□□□ -0.25
SMPD1-201ENST00000342245 C10orf105Q8TEF2 133 aa13.52□□□□□ -0.25
SMPD1-201ENST00000342245 AKAP13Q12802 2813 aa13.52□□□□□ -0.25
SMPD1-201ENST00000342245 ATP5EP2Q5VTU8 51 aa13.51□□□□□ -0.25
SMPD1-201ENST00000342245 J3QLI3 93 aa13.51□□□□□ -0.25
SMPD1-201ENST00000342245 FAM218AQ96MZ4 157 aa13.51□□□□□ -0.25
SMPD1-201ENST00000342245 UBE2D4Q9Y2X8 147 aa13.51□□□□□ -0.25
SMPD1-201ENST00000342245 FHL2Q14192 279 aa13.5□□□□□ -0.25
SMPD1-201ENST00000342245 BSNQ9UPA5 3926 aa13.5□□□□□ -0.25
SMPD1-201ENST00000342245 SERP1Q9Y6X1 66 aa13.5□□□□□ -0.25
SMPD1-201ENST00000342245 IGLV5-39A0A0G2JS06 123 aa13.49□□□□□ -0.25
SMPD1-201ENST00000342245 Q9H8V8 135 aa13.49□□□□□ -0.25
SMPD1-201ENST00000342245 LINC00846Q9NV44 126 aa13.49□□□□□ -0.25
SMPD1-201ENST00000342245 CEP250Q9BV73 2442 aa13.49□□□□□ -0.25
SMPD1-201ENST00000342245 ROS1P08922 2347 aa13.48□□□□□ -0.25
SMPD1-201ENST00000342245 TRAV12-2A0A075B6T6 113 aa13.48□□□□□ -0.25
SMPD1-201ENST00000342245 UNQ9165/PRO28630Q6UXU0 137 aa13.48□□□□□ -0.25
SMPD1-201ENST00000342245 CDKN2A-AS1Q9UH64 79 aa13.48□□□□□ -0.25
SMPD1-201ENST00000342245 IGHG2P01859 326 aa13.48□□□□□ -0.25
SMPD1-201ENST00000342245 IGHV1OR15-1A0A075B7D0 117 aa13.47□□□□□ -0.25
SMPD1-201ENST00000342245 A0A087WVE0 104 aa13.47□□□□□ -0.25
SMPD1-201ENST00000342245 FAM236DA0A1B0GTK5 79 aa13.47□□□□□ -0.25
SMPD1-201ENST00000342245 FAM236CP0DP71 79 aa13.47□□□□□ -0.25
SMPD1-201ENST00000342245 H0YGX0 51 aa13.47□□□□□ -0.25
SMPD1-201ENST00000342245 SOSTDC1Q6X4U4 206 aa13.46□□□□□ -0.25
SMPD1-201ENST00000342245 TMEM243Q9BU79 118 aa13.46□□□□□ -0.25
SMPD1-201ENST00000342245 RNASE13Q5GAN3 156 aaKnown RBP13.46□□□□□ -0.26
SMPD1-201ENST00000342245 Q9HAA7 133 aa13.46□□□□□ -0.26
SMPD1-201ENST00000342245 C14orf132Q9NPU4 83 aa13.46□□□□□ -0.26
SMPD1-201ENST00000342245 MAP1BP46821 2468 aaKnown RBP13.45□□□□□ -0.26
SMPD1-201ENST00000342245 ATMQ13315 3056 aa13.45□□□□□ -0.26
SMPD1-201ENST00000342245 RBMY1BA6NDE4 496 aaKnown RBP13.45□□□□□ -0.26
SMPD1-201ENST00000342245 RBMY1EA6NEQ0 496 aaKnown RBP13.45□□□□□ -0.26
SMPD1-201ENST00000342245 RBMY1DP0C7P1 496 aaKnown RBP13.45□□□□□ -0.26
SMPD1-201ENST00000342245 RBMY1A1P0DJD3 496 aaKnown RBP13.45□□□□□ -0.26
SMPD1-201ENST00000342245 RBMY1CP0DJD4 496 aa13.45□□□□□ -0.26
SMPD1-201ENST00000342245 RBMY1FQ15415 496 aaKnown RBP13.45□□□□□ -0.26
SMPD1-201ENST00000342245 CHCHD7Q9BUK0 85 aa13.45□□□□□ -0.26
SMPD1-201ENST00000342245 LINC00336Q6ZUF6 198 aa13.45□□□□□ -0.26
SMPD1-201ENST00000342245 BCE1O60756 84 aa13.44□□□□□ -0.26
SMPD1-201ENST00000342245 PIMREGQ9BSJ6 248 aa13.44□□□□□ -0.26
SMPD1-201ENST00000342245 RHPN1-AS1Q9BWJ2 59 aa13.44□□□□□ -0.26
SMPD1-201ENST00000342245 CRPP02741 224 aa13.44□□□□□ -0.26
SMPD1-201ENST00000342245 NACAE9PAV3 2078 aa13.43□□□□□ -0.26
SMPD1-201ENST00000342245 RS1O15537 224 aa13.43□□□□□ -0.26
SMPD1-201ENST00000342245 GHRHP01286 108 aa13.43□□□□□ -0.26
SMPD1-201ENST00000342245 C19orf54Q5BKX5 351 aa13.43□□□□□ -0.26
SMPD1-201ENST00000342245 C1orf43Q9BWL3 253 aa13.43□□□□□ -0.26
SMPD1-201ENST00000342245 ZNF292O60281 2723 aa13.43□□□□□ -0.26
SMPD1-201ENST00000342245 USMG5Q96IX5 58 aa13.42□□□□□ -0.26
SMPD1-201ENST00000342245 C5orf56Q8N8D9 126 aa13.42□□□□□ -0.26
SMPD1-201ENST00000342245 Q8NA96 180 aa13.42□□□□□ -0.26
SMPD1-201ENST00000342245 KALRNO60229 2985 aa13.42□□□□□ -0.26
SMPD1-201ENST00000342245 ADGRG4Q8IZF6 3080 aa13.42□□□□□ -0.26
SMPD1-201ENST00000342245 RIF1Q5UIP0 2472 aaKnown RBP13.42□□□□□ -0.26
SMPD1-201ENST00000342245 FAM19A3Q7Z5A8 133 aa13.41□□□□□ -0.26
SMPD1-201ENST00000342245 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
SMPD1-201ENST00000342245 PCNX1Q96RV3 2341 aa13.41□□□□□ -0.26
SMPD1-201ENST00000342245 TRBV10-3A0A0K0K1G6 114 aa13.41□□□□□ -0.26
SMPD1-201ENST00000342245 PKDREJQ9NTG1 2253 aa13.41□□□□□ -0.26
SMPD1-201ENST00000342245 WNK2Q9Y3S1 2297 aa13.41□□□□□ -0.26
SMPD1-201ENST00000342245 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.4□□□□□ -0.26
SMPD1-201ENST00000342245 TRBV12-3P01733 135 aa13.4□□□□□ -0.26
SMPD1-201ENST00000342245 H3BUA1 57 aa13.4□□□□□ -0.26
SMPD1-201ENST00000342245 IGKV3-7A0A075B6H7 116 aa13.39□□□□□ -0.27
SMPD1-201ENST00000342245 ZNF625Q96I27 306 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-201ENST00000342245 SIRPDQ9H106 197 aa13.39□□□□□ -0.27
SMPD1-201ENST00000342245 DCHS1Q96JQ0 3298 aa13.39□□□□□ -0.27
SMPD1-201ENST00000342245 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms