RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
BRCC3-202ENST00000340647 A0A1B0GUV1 79 aa11.03□□□□□ -0.64
BRCC3-202ENST00000340647 GAS8-AS1O95177 125 aa11.03□□□□□ -0.64
BRCC3-202ENST00000340647 PKIAP61925 76 aa11.03□□□□□ -0.64
BRCC3-202ENST00000340647 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-202ENST00000340647 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
BRCC3-202ENST00000340647 HLA-DQA1P01909 254 aa11.02□□□□□ -0.65
BRCC3-202ENST00000340647 REG3AQ06141 175 aa11.02□□□□□ -0.65
BRCC3-202ENST00000340647 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
BRCC3-202ENST00000340647 CIRBP-AS1Q8TBR5 109 aa11.02□□□□□ -0.65
BRCC3-202ENST00000340647 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
BRCC3-202ENST00000340647 IGLV10-54A0A075B6I4 117 aa11.01□□□□□ -0.65
BRCC3-202ENST00000340647 TMEM243Q9BU79 118 aa11.01□□□□□ -0.65
BRCC3-202ENST00000340647 GATCO43716 136 aaKnown RBP11□□□□□ -0.65
BRCC3-202ENST00000340647 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
BRCC3-202ENST00000340647 LINC01551Q86U37 167 aa11□□□□□ -0.65
BRCC3-202ENST00000340647 FAM210AQ96ND0 272 aa11□□□□□ -0.65
BRCC3-202ENST00000340647 FAT3Q8TDW7 4589 aa11□□□□□ -0.65
BRCC3-202ENST00000340647 PANO1I0J062 215 aa10.99□□□□□ -0.65
BRCC3-202ENST00000340647 NDUFS6O75380 124 aaKnown RBP10.99□□□□□ -0.65
BRCC3-202ENST00000340647 SLPIP03973 132 aa10.99□□□□□ -0.65
BRCC3-202ENST00000340647 C9JQL5 133 aa10.98□□□□□ -0.65
BRCC3-202ENST00000340647 CEBPGP53567 150 aa10.98□□□□□ -0.65
BRCC3-202ENST00000340647 C14orf177Q52M58 125 aa10.98□□□□□ -0.65
BRCC3-202ENST00000340647 CT83Q5H943 113 aa10.98□□□□□ -0.65
BRCC3-202ENST00000340647 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
BRCC3-202ENST00000340647 FAM231BA6NCW3 169 aa10.97□□□□□ -0.65
BRCC3-202ENST00000340647 A8MWL6 223 aa10.97□□□□□ -0.65
BRCC3-202ENST00000340647 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
BRCC3-202ENST00000340647 AMTP48728 403 aa10.96□□□□□ -0.65
BRCC3-202ENST00000340647 COTL1Q14019 142 aa10.96□□□□□ -0.65
BRCC3-202ENST00000340647 RNF185Q96GF1 192 aa10.96□□□□□ -0.65
BRCC3-202ENST00000340647 EIF5A2Q9GZV4 153 aaKnown RBP10.96□□□□□ -0.65
BRCC3-202ENST00000340647 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.96□□□□□ -0.65
BRCC3-202ENST00000340647 DGAT2L7PQ6IED9 249 aa10.95□□□□□ -0.66
BRCC3-202ENST00000340647 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
BRCC3-202ENST00000340647 V9GYV3 84 aa10.95□□□□□ -0.66
BRCC3-202ENST00000340647 TRAV8-4A0A0B4J246 113 aa10.94□□□□□ -0.66
BRCC3-202ENST00000340647 TRBV6-5A0A0K0K1A5 114 aa10.94□□□□□ -0.66
BRCC3-202ENST00000340647 SDHAF1A6NFY7 115 aa10.94□□□□□ -0.66
BRCC3-202ENST00000340647 ZNF727A8MUV8 499 aa10.94□□□□□ -0.66
BRCC3-202ENST00000340647 HIGD1CA8MV81 97 aa10.94□□□□□ -0.66
BRCC3-202ENST00000340647 RPS10P46783 165 aaKnown RBP10.94□□□□□ -0.66
BRCC3-202ENST00000340647 SRSF3P84103 164 aaKnown RBP10.94□□□□□ -0.66
BRCC3-202ENST00000340647 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
BRCC3-202ENST00000340647 OSTCQ9NRP0 149 aa10.94□□□□□ -0.66
BRCC3-202ENST00000340647 HMCN2Q8NDA2 5059 aa10.93□□□□□ -0.66
BRCC3-202ENST00000340647 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
BRCC3-202ENST00000340647 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
BRCC3-202ENST00000340647 PLA2G1BP04054 148 aaKnown RBP10.93□□□□□ -0.66
BRCC3-202ENST00000340647 ESDP10768 282 aa10.92□□□□□ -0.66
BRCC3-202ENST00000340647 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
BRCC3-202ENST00000340647 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
BRCC3-202ENST00000340647 TMEM191AQ9H0A3 160 aa10.92□□□□□ -0.66
BRCC3-202ENST00000340647 A0A1B0GUT8 65 aa10.91□□□□□ -0.66
BRCC3-202ENST00000340647 J3QL48 77 aa10.91□□□□□ -0.66
BRCC3-202ENST00000340647 NCR2O95944 276 aa10.91□□□□□ -0.66
BRCC3-202ENST00000340647 TSHBP01222 138 aa10.91□□□□□ -0.66
BRCC3-202ENST00000340647 RAB4AP20338 218 aa10.91□□□□□ -0.66
BRCC3-202ENST00000340647 POLR2KP53803 58 aaKnown RBP10.91□□□□□ -0.66
BRCC3-202ENST00000340647 RPL23P62829 140 aaKnown RBP10.91□□□□□ -0.66
BRCC3-202ENST00000340647 CLRN3Q8NCR9 226 aa10.91□□□□□ -0.66
BRCC3-202ENST00000340647 ISOC2Q96AB3 205 aa10.91□□□□□ -0.66
BRCC3-202ENST00000340647 UBE2L6O14933 153 aa10.9□□□□□ -0.66
BRCC3-202ENST00000340647 CIRBPQ14011 172 aaKnown RBP10.9□□□□□ -0.66
BRCC3-202ENST00000340647 TEX261Q6UWH6 196 aa10.9□□□□□ -0.66
BRCC3-202ENST00000340647 AMN1Q8IY45 258 aa10.9□□□□□ -0.66
BRCC3-202ENST00000340647 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
BRCC3-202ENST00000340647 UBR4Q5T4S7 5183 aa10.89□□□□□ -0.67
BRCC3-202ENST00000340647 FGF6P10767 208 aa10.89□□□□□ -0.67
BRCC3-202ENST00000340647 HNRNPA3P51991 378 aaKnown RBP10.89□□□□□ -0.67
BRCC3-202ENST00000340647 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
BRCC3-202ENST00000340647 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
BRCC3-202ENST00000340647 GAGE12HA6NDE8 117 aa10.88□□□□□ -0.67
BRCC3-202ENST00000340647 KRTAP29-1A8MX34 341 aaPredicted RBP10.88□□□□□ -0.67
BRCC3-202ENST00000340647 H7C423 109 aa10.88□□□□□ -0.67
BRCC3-202ENST00000340647 I3L3M4 83 aa10.88□□□□□ -0.67
BRCC3-202ENST00000340647 APCSP02743 223 aa10.88□□□□□ -0.67
BRCC3-202ENST00000340647 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
BRCC3-202ENST00000340647 SMKR1H3BMG3 65 aa10.87□□□□□ -0.67
BRCC3-202ENST00000340647 TMEM241Q24JQ0 296 aa10.87□□□□□ -0.67
BRCC3-202ENST00000340647 NRACQ8N912 160 aa10.87□□□□□ -0.67
BRCC3-202ENST00000340647 TMEM242Q9NWH2 141 aa10.87□□□□□ -0.67
BRCC3-202ENST00000340647 TRBV27A0A0K0K1C4 114 aa10.86□□□□□ -0.67
BRCC3-202ENST00000340647 PMCHP20382 165 aa10.86□□□□□ -0.67
BRCC3-202ENST00000340647 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
BRCC3-202ENST00000340647 CHTF8P0CG12 524 aa10.85□□□□□ -0.67
BRCC3-202ENST00000340647 FOXI1Q12951 378 aa10.85□□□□□ -0.67
BRCC3-202ENST00000340647 RNASEKQ6P5S7 137 aaKnown RBP10.85□□□□□ -0.67
BRCC3-202ENST00000340647 ST20Q9HBF5 79 aa10.85□□□□□ -0.67
BRCC3-202ENST00000340647 SMIM27A0A1W2PRY6 76 aa10.84□□□□□ -0.67
BRCC3-202ENST00000340647 FAM74A3Q4VXF1 159 aa10.84□□□□□ -0.67
BRCC3-202ENST00000340647 AMMECR1LQ6DCA0 310 aa10.84□□□□□ -0.67
BRCC3-202ENST00000340647 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
BRCC3-202ENST00000340647 OR5A1Q8NGJ0 315 aa10.83□□□□□ -0.68
BRCC3-202ENST00000340647 BORCS7Q96B45 105 aa10.83□□□□□ -0.68
BRCC3-202ENST00000340647 CDC42SE2Q9NRR3 84 aa10.83□□□□□ -0.68
BRCC3-202ENST00000340647 NAT8Q9UHE5 227 aa10.83□□□□□ -0.68
BRCC3-202ENST00000340647 LINC00959A0A1B0GUT2 108 aa10.82□□□□□ -0.68
BRCC3-202ENST00000340647 ZNF25P17030 456 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms