RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ZNRF2Q8NHG8 242 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 GAGE12JA6NER3 117 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 PPP1R17O96001 155 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 GAGE4Q13068 117 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 GAGE5Q13069 117 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 GAGE13Q4V321 117 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 CHCHD1Q96BP2 118 aaKnown RBP10.34□□□□□ -0.75
CSRP1-201ENST00000340006 VSIG2Q96IQ7 327 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 PACRGQ96M98 296 aaPredicted RBP10.34□□□□□ -0.75
CSRP1-201ENST00000340006 WWC2-AS2Q96NR7 200 aa10.34□□□□□ -0.75
CSRP1-201ENST00000340006 TRBV10-1A0A0K0K1A3 114 aa10.33□□□□□ -0.76
CSRP1-201ENST00000340006 HSBP1O75506 76 aa10.33□□□□□ -0.76
CSRP1-201ENST00000340006 NUDT3O95989 172 aa10.33□□□□□ -0.76
CSRP1-201ENST00000340006 RPL36AP83881 106 aaKnown RBP10.33□□□□□ -0.76
CSRP1-201ENST00000340006 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
CSRP1-201ENST00000340006 RPL36ALQ969Q0 106 aaKnown RBP10.33□□□□□ -0.76
CSRP1-201ENST00000340006 TRBV7-3A0A075B6L6 115 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
CSRP1-201ENST00000340006 TMEM18Q96B42 140 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 C20orf78Q9BR46 151 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 PMCHP20382 165 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 CEMP1Q6PRD7 247 aaPredicted RBP10.32□□□□□ -0.76
CSRP1-201ENST00000340006 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 ST20Q9HBF5 79 aa10.32□□□□□ -0.76
CSRP1-201ENST00000340006 NXT2Q9NPJ8 142 aaKnown RBP10.32□□□□□ -0.76
CSRP1-201ENST00000340006 A0A096LPF7 62 aa10.31□□□□□ -0.76
CSRP1-201ENST00000340006 AMTP48728 403 aa10.31□□□□□ -0.76
CSRP1-201ENST00000340006 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
CSRP1-201ENST00000340006 FAM19A2Q8N3H0 131 aa10.31□□□□□ -0.76
CSRP1-201ENST00000340006 KLK5Q9Y337 293 aaPredicted RBP10.31□□□□□ -0.76
CSRP1-201ENST00000340006 NUPR2A6NF83 97 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 MUC7Q8TAX7 377 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 ICOSQ9Y6W8 199 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 IGLV2-18A0A075B6J9 118 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 H3BNG1 76 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 Q8N8P6 123 aa10.3□□□□□ -0.76
CSRP1-201ENST00000340006 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
CSRP1-201ENST00000340006 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 K7EP13 123 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 DEFB104AQ8WTQ1 72 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 TMEM70Q9BUB7 260 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 CSMD3Q7Z407 3707 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 C15orf53Q8NAA6 179 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 ATP6V0E2Q8NHE4 81 aa10.28□□□□□ -0.76
CSRP1-201ENST00000340006 DNAH7Q8WXX0 4024 aa10.27□□□□□ -0.76
CSRP1-201ENST00000340006 LINC01546A6NGU7 62 aa10.27□□□□□ -0.77
CSRP1-201ENST00000340006 POLR2KP53803 58 aaKnown RBP10.27□□□□□ -0.77
CSRP1-201ENST00000340006 NEGR1Q7Z3B1 354 aa10.27□□□□□ -0.77
CSRP1-201ENST00000340006 VCYO14598 125 aa10.26□□□□□ -0.77
CSRP1-201ENST00000340006 UBE2D3P61077 147 aa10.26□□□□□ -0.77
CSRP1-201ENST00000340006 UBE2D2P62837 147 aa10.26□□□□□ -0.77
CSRP1-201ENST00000340006 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
CSRP1-201ENST00000340006 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
CSRP1-201ENST00000340006 DAZ4Q86SG3 579 aaKnown RBP10.26□□□□□ -0.77
CSRP1-201ENST00000340006 DAZ3Q9NR90 486 aaKnown RBP10.26□□□□□ -0.77
CSRP1-201ENST00000340006 TRBV27A0A0K0K1C4 114 aa10.25□□□□□ -0.77
CSRP1-201ENST00000340006 I3L3M4 83 aa10.25□□□□□ -0.77
CSRP1-201ENST00000340006 A0A096LNJ9 63 aa10.25□□□□□ -0.77
CSRP1-201ENST00000340006 LAGE3Q14657 143 aa10.25□□□□□ -0.77
CSRP1-201ENST00000340006 KIR2DL4Q99706 377 aa10.25□□□□□ -0.77
CSRP1-201ENST00000340006 TENM2Q9NT68 2774 aa10.24□□□□□ -0.77
CSRP1-201ENST00000340006 K7EMI3 77 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 HBDP02042 147 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 GTSF1LQ9H1H1 148 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 LEPROTL1O95214 131 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 FCER1GP30273 86 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 CFAP161Q6P656 301 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 LYPD5Q6UWN5 251 aa10.23□□□□□ -0.77
CSRP1-201ENST00000340006 APLNQ9ULZ1 77 aa10.22□□□□□ -0.77
CSRP1-201ENST00000340006 LINC00694P0DN24 101 aa10.21□□□□□ -0.77
CSRP1-201ENST00000340006 TCTAP57738 103 aa10.21□□□□□ -0.77
CSRP1-201ENST00000340006 C3orf84H3BNL1 204 aa10.21□□□□□ -0.78
CSRP1-201ENST00000340006 CCL18P55774 89 aa10.21□□□□□ -0.78
CSRP1-201ENST00000340006 ESRGQ1W209 222 aa10.21□□□□□ -0.78
CSRP1-201ENST00000340006 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
CSRP1-201ENST00000340006 LINC00173Q6ZV60 143 aa10.2□□□□□ -0.78
CSRP1-201ENST00000340006 TMEM238C9JI98 176 aa10.19□□□□□ -0.78
CSRP1-201ENST00000340006 TSHBP01222 138 aa10.19□□□□□ -0.78
CSRP1-201ENST00000340006 CASC10Q5T4H9 136 aa10.19□□□□□ -0.78
CSRP1-201ENST00000340006 HSPB8Q9UJY1 196 aa10.19□□□□□ -0.78
CSRP1-201ENST00000340006 TRBV6-8A0A0A6YYG3 113 aa10.19□□□□□ -0.78
CSRP1-201ENST00000340006 KRTDAPP60985 99 aa10.19□□□□□ -0.78
CSRP1-201ENST00000340006 TRBV25-1A0A075B6N4 114 aa10.18□□□□□ -0.78
CSRP1-201ENST00000340006 C3orf79P0CE67 100 aa10.18□□□□□ -0.78
CSRP1-201ENST00000340006 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
CSRP1-201ENST00000340006 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
CSRP1-201ENST00000340006 TRAV8-6A0A0B4J262 113 aa10.17□□□□□ -0.78
CSRP1-201ENST00000340006 SCGB1D1O95968 90 aa10.17□□□□□ -0.78
CSRP1-201ENST00000340006 LELP1Q5T871 98 aa10.17□□□□□ -0.78
CSRP1-201ENST00000340006 UBE2DNLQ8IWF7 75 aa10.17□□□□□ -0.78
CSRP1-201ENST00000340006 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
CSRP1-201ENST00000340006 TMEM262E9PQX1 116 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms