RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
NUDCD3-201ENST00000338427 XKRY2A2RUG3 117 aa8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 KRTAP29-1A8MX34 341 aaPredicted RBP8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 TRGC1P0CF51 173 aa8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 PKIAP61925 76 aa8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 RPL39LQ96EH5 51 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 SMIM12Q96EX1 92 aa8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 RPP21Q9H633 154 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-201ENST00000338427 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
NUDCD3-201ENST00000338427 HNRNPA3P51991 378 aaKnown RBP8.58□□□□□ -1.04
NUDCD3-201ENST00000338427 DGAT2L7PQ6IED9 249 aa8.58□□□□□ -1.04
NUDCD3-201ENST00000338427 WDR73Q6P4I2 378 aa8.58□□□□□ -1.04
NUDCD3-201ENST00000338427 ALKAL2Q6UX46 152 aa8.58□□□□□ -1.04
NUDCD3-201ENST00000338427 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
NUDCD3-201ENST00000338427 GAS8-AS1O95177 125 aa8.57□□□□□ -1.04
NUDCD3-201ENST00000338427 CTRLP40313 264 aa8.57□□□□□ -1.04
NUDCD3-201ENST00000338427 PGLYRP4Q96LB8 373 aa8.57□□□□□ -1.04
NUDCD3-201ENST00000338427 BIN3Q9NQY0 253 aa8.57□□□□□ -1.04
NUDCD3-201ENST00000338427 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
NUDCD3-201ENST00000338427 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
NUDCD3-201ENST00000338427 AMTP48728 403 aa8.56□□□□□ -1.04
NUDCD3-201ENST00000338427 CEBPGP53567 150 aa8.56□□□□□ -1.04
NUDCD3-201ENST00000338427 COTL1Q14019 142 aa8.56□□□□□ -1.04
NUDCD3-201ENST00000338427 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-201ENST00000338427 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
NUDCD3-201ENST00000338427 GAGE12HA6NDE8 117 aa8.55□□□□□ -1.04
NUDCD3-201ENST00000338427 CHTF8P0CG12 524 aa8.55□□□□□ -1.04
NUDCD3-201ENST00000338427 CNFNQ9BYD5 112 aa8.55□□□□□ -1.04
NUDCD3-201ENST00000338427 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
NUDCD3-201ENST00000338427 UBE2L6O14933 153 aa8.54□□□□□ -1.04
NUDCD3-201ENST00000338427 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
NUDCD3-201ENST00000338427 CLRN3Q8NCR9 226 aa8.54□□□□□ -1.04
NUDCD3-201ENST00000338427 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
NUDCD3-201ENST00000338427 FAM231BA6NCW3 169 aa8.53□□□□□ -1.04
NUDCD3-201ENST00000338427 BLOC1S1P78537 153 aa8.53□□□□□ -1.04
NUDCD3-201ENST00000338427 AKAP14Q86UN6 197 aa8.53□□□□□ -1.04
NUDCD3-201ENST00000338427 TAGLN2P37802 199 aaKnown RBP8.52□□□□□ -1.05
NUDCD3-201ENST00000338427 HIGD2BQ4VC39 106 aa8.52□□□□□ -1.05
NUDCD3-201ENST00000338427 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
NUDCD3-201ENST00000338427 C15orf56Q8N910 161 aa8.52□□□□□ -1.05
NUDCD3-201ENST00000338427 LYPD6BQ8NI32 183 aa8.52□□□□□ -1.05
NUDCD3-201ENST00000338427 HMCN2Q8NDA2 5059 aa8.51□□□□□ -1.05
NUDCD3-201ENST00000338427 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
NUDCD3-201ENST00000338427 CNBPP62633 177 aaKnown RBP8.51□□□□□ -1.05
NUDCD3-201ENST00000338427 A8MWL6 223 aa8.5□□□□□ -1.05
NUDCD3-201ENST00000338427 TMEM250H0YL14 139 aa8.5□□□□□ -1.05
NUDCD3-201ENST00000338427 FGF6P10767 208 aa8.5□□□□□ -1.05
NUDCD3-201ENST00000338427 PMCHP20382 165 aa8.5□□□□□ -1.05
NUDCD3-201ENST00000338427 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
NUDCD3-201ENST00000338427 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
NUDCD3-201ENST00000338427 EIF5A2Q9GZV4 153 aaKnown RBP8.5□□□□□ -1.05
NUDCD3-201ENST00000338427 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 A0A087WYN8 130 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 A0A1B0GVG6 124 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 SRP19P09132 144 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 AMMECR1LQ6DCA0 310 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 SMIM15Q7Z3B0 74 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 PRSS3P2Q8NHM4 247 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 RNF185Q96GF1 192 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 AP5S1Q9NUS5 200 aa8.49□□□□□ -1.05
NUDCD3-201ENST00000338427 SMKR1H3BMG3 65 aa8.48□□□□□ -1.05
NUDCD3-201ENST00000338427 OXTP01178 125 aa8.48□□□□□ -1.05
NUDCD3-201ENST00000338427 APCSP02743 223 aa8.48□□□□□ -1.05
NUDCD3-201ENST00000338427 RPS10P46783 165 aaKnown RBP8.48□□□□□ -1.05
NUDCD3-201ENST00000338427 COX6A2Q02221 97 aa8.48□□□□□ -1.05
NUDCD3-201ENST00000338427 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
NUDCD3-201ENST00000338427 SMIM7Q9BQ49 75 aa8.48□□□□□ -1.05
NUDCD3-201ENST00000338427 I3L3M4 83 aa8.47□□□□□ -1.05
NUDCD3-201ENST00000338427 TSHBP01222 138 aa8.47□□□□□ -1.05
NUDCD3-201ENST00000338427 ESDP10768 282 aa8.47□□□□□ -1.05
NUDCD3-201ENST00000338427 RAB4AP20338 218 aa8.47□□□□□ -1.05
NUDCD3-201ENST00000338427 FOXI1Q12951 378 aa8.47□□□□□ -1.05
NUDCD3-201ENST00000338427 LINC01551Q86U37 167 aa8.47□□□□□ -1.05
NUDCD3-201ENST00000338427 TMEM242Q9NWH2 141 aa8.47□□□□□ -1.05
NUDCD3-201ENST00000338427 TRBV6-5A0A0K0K1A5 114 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 ZNF727A8MUV8 499 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 HIGD1CA8MV81 97 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 C9JQL5 133 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 NCR2O95944 276 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 POLR2KP53803 58 aaKnown RBP8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 AMN1Q8IY45 258 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 FAM210AQ96ND0 272 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 ST20Q9HBF5 79 aa8.46□□□□□ -1.06
NUDCD3-201ENST00000338427 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 XCL1P47992 114 aa8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 CFAP161Q6P656 301 aa8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 TEX261Q6UWH6 196 aa8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 SPACA4Q8TDM5 124 aa8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 TSKUQ8WUA8 353 aa8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 V9GYV3 84 aa8.45□□□□□ -1.06
NUDCD3-201ENST00000338427 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 CCL25O15444 150 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 SRSF3P84103 164 aaKnown RBP8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 MAJINQ3KP22 176 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 CT83Q5H943 113 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms