RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 NIPBLQ6KC79 2804 aaeCLIP6.18□□□□□ -1.42
HPS4-201ENST00000336873 NOTCH1P46531 2555 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 IGLL5B9A064 214 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 FAM110AQ9BQ89 295 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 ERG28Q9UKR5 140 aa6.18□□□□□ -1.42
HPS4-201ENST00000336873 A4D1N5 150 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 INSL3P51460 131 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 ZNF580Q9UK33 172 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 J3QQQ9 107 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
HPS4-201ENST00000336873 ZNF469Q96JG9 3925 aaPredicted RBP6.17□□□□□ -1.42
HPS4-201ENST00000336873 EBI3Q14213 229 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 NRACQ8N912 160 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 HHLA3Q9XRX5 114 aa6.17□□□□□ -1.42
HPS4-201ENST00000336873 C19orf54Q5BKX5 351 aa6.16□□□□□ -1.42
HPS4-201ENST00000336873 PIFOQ8TCI5 191 aa6.16□□□□□ -1.42
HPS4-201ENST00000336873 SETXQ7Z333 2677 aaKnown RBP6.16□□□□□ -1.42
HPS4-201ENST00000336873 Q9UF83 564 aa6.16□□□□□ -1.42
HPS4-201ENST00000336873 DEFB4AO15263 64 aa6.16□□□□□ -1.42
HPS4-201ENST00000336873 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
HPS4-201ENST00000336873 WFDC10AQ9H1F0 79 aa6.16□□□□□ -1.42
HPS4-201ENST00000336873 RS1O15537 224 aa6.15□□□□□ -1.42
HPS4-201ENST00000336873 LGALS1P09382 135 aaKnown RBP6.15□□□□□ -1.42
HPS4-201ENST00000336873 IFITM1P13164 125 aa6.15□□□□□ -1.42
HPS4-201ENST00000336873 CHCHD5Q9BSY4 110 aa6.15□□□□□ -1.42
HPS4-201ENST00000336873 TRGV4A0A0C4DH28 118 aa6.15□□□□□ -1.42
HPS4-201ENST00000336873 PF4P02776 101 aa6.15□□□□□ -1.42
HPS4-201ENST00000336873 J3QKU1 62 aa6.15□□□□□ -1.43
HPS4-201ENST00000336873 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.43
HPS4-201ENST00000336873 A6NDX4 124 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 DLX4Q92988 240 aaPredicted RBP6.14□□□□□ -1.43
HPS4-201ENST00000336873 NOP10Q9NPE3 64 aaKnown RBP6.14□□□□□ -1.43
HPS4-201ENST00000336873 U3KQE9 123 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 PEMTQ9UBM1 199 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 TRGV11A0A075B6L2 103 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 A8MWV9 139 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 COX6CP09669 75 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 PFN2P35080 140 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 PAPPA-AS1Q5QFB9 102 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 WFDC11Q8NEX6 87 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 VPREB3Q9UKI3 123 aa6.14□□□□□ -1.43
HPS4-201ENST00000336873 I3L3M4 83 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 RPL13AP40429 203 aaKnown RBP6.13□□□□□ -1.43
HPS4-201ENST00000336873 GPHB5Q86YW7 130 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 MRPL53Q96EL3 112 aaKnown RBP6.13□□□□□ -1.43
HPS4-201ENST00000336873 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 NDUFA7O95182 113 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 FOXI2Q6ZQN5 318 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 Q6ZSV7 163 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 Q6ZUT4 128 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 UNC79Q9P2D8 2635 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 A0A0J9YX75 114 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 TSPAN13O95857 204 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 PRIMA1Q86XR5 153 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 C1orf43Q9BWL3 253 aa6.13□□□□□ -1.43
HPS4-201ENST00000336873 SPANXB1Q9NS25 103 aaPredicted RBP6.13□□□□□ -1.43
HPS4-201ENST00000336873 UFSP1Q6NVU6 142 aa6.12□□□□□ -1.43
HPS4-201ENST00000336873 TOMM6Q96B49 74 aa6.12□□□□□ -1.43
HPS4-201ENST00000336873 PPDPFQ9H3Y8 114 aa6.12□□□□□ -1.43
HPS4-201ENST00000336873 U3KQK5 164 aa6.12□□□□□ -1.43
HPS4-201ENST00000336873 LINC01619G3V211 115 aa6.12□□□□□ -1.43
HPS4-201ENST00000336873 PLA2G2AP14555 144 aa6.12□□□□□ -1.43
HPS4-201ENST00000336873 M0R2P5 195 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 CIRBPQ14011 172 aaKnown RBP6.11□□□□□ -1.43
HPS4-201ENST00000336873 ZNF843Q8N446 348 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 SPATA25Q9BR10 227 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 NXPH4O95158 308 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 LINC00158P58513 81 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 ZNF415Q09FC8 603 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 FOXI1Q12951 378 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 ZNF575Q86XF7 245 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 PSMG3-AS1Q96PY0 264 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 TAL2Q16559 108 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 NEXN-AS1Q8NBZ9 246 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
HPS4-201ENST00000336873 NTN5Q8WTR8 489 aaPredicted RBP6.1□□□□□ -1.43
HPS4-201ENST00000336873 CRIP2P52943 208 aaPredicted RBP6.1□□□□□ -1.43
HPS4-201ENST00000336873 DCANP1Q8TF63 244 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 HIGD1BQ9P298 99 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 A0A0J9YY99 117 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 E9PLD3 99 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 INSP01308 110 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 XGP55808 180 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 RPL36AP83881 106 aaKnown RBP6.1□□□□□ -1.43
HPS4-201ENST00000336873 C5orf38Q86SI9 138 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 RPL36ALQ969Q0 106 aaKnown RBP6.1□□□□□ -1.43
HPS4-201ENST00000336873 TMEM141Q96I45 108 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 BBC3Q96PG8 261 aaPredicted RBP6.1□□□□□ -1.43
HPS4-201ENST00000336873 LENEPQ9Y5L5 61 aa6.1□□□□□ -1.43
HPS4-201ENST00000336873 IGLV10-54A0A075B6I4 117 aa6.09□□□□□ -1.43
HPS4-201ENST00000336873 DEFB113Q30KQ7 82 aa6.09□□□□□ -1.43
HPS4-201ENST00000336873 CLEC2BQ92478 149 aa6.09□□□□□ -1.43
HPS4-201ENST00000336873 C2orf82Q6UX34 121 aa6.09□□□□□ -1.43
HPS4-201ENST00000336873 Q6ZTI0 123 aa6.09□□□□□ -1.43
HPS4-201ENST00000336873 SMR3AQ99954 134 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms