RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
APOBEC3B-202ENST00000335760 AMTP48728 403 aa9.61□□□□□ -0.87
APOBEC3B-202ENST00000335760 LOC389332A0A1B0GUA5 103 aa9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 TSHBP01222 138 aa9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 RPL32P62910 135 aaKnown RBP9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 IQCJQ1A5X6 159 aa9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 CHCHD5Q9BSY4 110 aa9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 DNAH6Q9C0G6 4158 aa9.6□□□□□ -0.87
APOBEC3B-202ENST00000335760 KMT2AQ03164 3969 aa9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 COLCA2A8K830 154 aa9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 TMEM262E9PQX1 116 aa9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 M0R2N4 97 aa9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 DNAH10OSP0CZ25 163 aa9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 KIR2DL4Q99706 377 aa9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 ALKBH7Q9BT30 221 aaPredicted RBP9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 TMEM243Q9BU79 118 aa9.59□□□□□ -0.87
APOBEC3B-202ENST00000335760 RYR3Q15413 4870 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 IGHV3-30P01768 117 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 IGHV3-33P01772 117 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 IGHV3-30-5P0DP03 117 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 FCER1GP30273 86 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 GAGE6Q13070 117 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 NIT1Q86X76 327 aa9.58□□□□□ -0.88
APOBEC3B-202ENST00000335760 PRSS47A8MTI9 375 aa9.57□□□□□ -0.88
APOBEC3B-202ENST00000335760 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
APOBEC3B-202ENST00000335760 Q8N3U1 123 aa9.57□□□□□ -0.88
APOBEC3B-202ENST00000335760 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
APOBEC3B-202ENST00000335760 A0A087WX48 190 aa9.56□□□□□ -0.88
APOBEC3B-202ENST00000335760 UBE2L6O14933 153 aa9.56□□□□□ -0.88
APOBEC3B-202ENST00000335760 RAB5AP20339 215 aa9.56□□□□□ -0.88
APOBEC3B-202ENST00000335760 TTC32Q5I0X7 151 aa9.56□□□□□ -0.88
APOBEC3B-202ENST00000335760 CHCHD7Q9BUK0 85 aa9.56□□□□□ -0.88
APOBEC3B-202ENST00000335760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3B-202ENST00000335760 IGKV2-29A2NJV5 120 aaPredicted RBP9.55□□□□□ -0.88
APOBEC3B-202ENST00000335760 TCAPO15273 167 aa9.55□□□□□ -0.88
APOBEC3B-202ENST00000335760 ESDP10768 282 aa9.55□□□□□ -0.88
APOBEC3B-202ENST00000335760 PKIAP61925 76 aa9.55□□□□□ -0.88
APOBEC3B-202ENST00000335760 Q6ZR54 194 aa9.55□□□□□ -0.88
APOBEC3B-202ENST00000335760 Q8N8P6 123 aa9.55□□□□□ -0.88
APOBEC3B-202ENST00000335760 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
APOBEC3B-202ENST00000335760 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
APOBEC3B-202ENST00000335760 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
APOBEC3B-202ENST00000335760 NXT2Q9NPJ8 142 aaKnown RBP9.54□□□□□ -0.88
APOBEC3B-202ENST00000335760 TRGC2P03986 189 aa9.53□□□□□ -0.88
APOBEC3B-202ENST00000335760 C10orf126Q8N4M7 172 aa9.53□□□□□ -0.88
APOBEC3B-202ENST00000335760 PRSS3P2Q8NHM4 247 aa9.53□□□□□ -0.88
APOBEC3B-202ENST00000335760 H7C423 109 aa9.52□□□□□ -0.88
APOBEC3B-202ENST00000335760 K7EP13 123 aa9.52□□□□□ -0.88
APOBEC3B-202ENST00000335760 RBX1P62877 108 aa9.52□□□□□ -0.88
APOBEC3B-202ENST00000335760 Q8N976 141 aa9.52□□□□□ -0.88
APOBEC3B-202ENST00000335760 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
APOBEC3B-202ENST00000335760 RNASEKQ6P5S7 137 aaKnown RBP9.51□□□□□ -0.89
APOBEC3B-202ENST00000335760 KLK12Q9UKR0 248 aa9.51□□□□□ -0.89
APOBEC3B-202ENST00000335760 IBA57-AS1B1ANH7 110 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 FGF6P10767 208 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 C18orf32Q8TCD1 76 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 TMEM18Q96B42 140 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 DNAH2Q9P225 4427 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 IGLV4-60A0A075B6I1 120 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 A0A1B0GUV1 79 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 K7EMI3 77 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 LAGE3Q14657 143 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 ORMDL2Q53FV1 153 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 FA2HQ7L5A8 372 aa9.5□□□□□ -0.89
APOBEC3B-202ENST00000335760 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
APOBEC3B-202ENST00000335760 C1orf134Q5TEV5 83 aa9.49□□□□□ -0.89
APOBEC3B-202ENST00000335760 C6orf223Q8N319 242 aa9.49□□□□□ -0.89
APOBEC3B-202ENST00000335760 TMEM101Q96IK0 257 aa9.49□□□□□ -0.89
APOBEC3B-202ENST00000335760 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 ZNF25P17030 456 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 SMAGPQ0VAQ4 97 aa9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 MRPL52Q86TS9 123 aaKnown RBP9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 Q9HAA7 133 aa9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
APOBEC3B-202ENST00000335760 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
APOBEC3B-202ENST00000335760 DGAT2L7PQ6IED9 249 aa9.47□□□□□ -0.89
APOBEC3B-202ENST00000335760 CLPSL2Q6UWE3 100 aa9.47□□□□□ -0.89
APOBEC3B-202ENST00000335760 OR5A1Q8NGJ0 315 aa9.47□□□□□ -0.89
APOBEC3B-202ENST00000335760 URB1-AS1Q96HZ7 61 aa9.47□□□□□ -0.89
APOBEC3B-202ENST00000335760 TRAV8-3A0A0A6YYJ7 113 aa9.46□□□□□ -0.9
APOBEC3B-202ENST00000335760 CRPP02741 224 aa9.46□□□□□ -0.9
APOBEC3B-202ENST00000335760 LINC00614P0C842 121 aa9.46□□□□□ -0.9
APOBEC3B-202ENST00000335760 RAB5BP61020 215 aa9.46□□□□□ -0.9
APOBEC3B-202ENST00000335760 ENHOQ6UWT2 76 aa9.46□□□□□ -0.9
APOBEC3B-202ENST00000335760 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.9
APOBEC3B-202ENST00000335760 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.9
APOBEC3B-202ENST00000335760 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
APOBEC3B-202ENST00000335760 G0S2P27469 103 aa9.45□□□□□ -0.9
APOBEC3B-202ENST00000335760 Q0VG73 95 aa9.45□□□□□ -0.9
APOBEC3B-202ENST00000335760 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
APOBEC3B-202ENST00000335760 AP5S1Q9NUS5 200 aa9.45□□□□□ -0.9
APOBEC3B-202ENST00000335760 CYSLTR1Q9Y271 337 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms