RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 I3L3M4 83 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 RHODO00212 210 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 DLEU1O43261 78 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 AZU1P20160 251 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 RHOHQ15669 191 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 ZC2HC1BQ5TFG8 222 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 CFAP126Q5VTH2 177 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 UFSP1Q6NVU6 142 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 C2orf91Q6ZV80 131 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
LSAMP-201ENST00000333617 MRPL16Q9NX20 251 aaKnown RBP6.31□□□□□ -1.4
LSAMP-201ENST00000333617 RS1O15537 224 aa6.3□□□□□ -1.4
LSAMP-201ENST00000333617 TSHBP01222 138 aa6.3□□□□□ -1.4
LSAMP-201ENST00000333617 MPV17L2Q567V2 206 aa6.3□□□□□ -1.4
LSAMP-201ENST00000333617 C12orf54Q6X4T0 127 aa6.3□□□□□ -1.4
LSAMP-201ENST00000333617 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
LSAMP-201ENST00000333617 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
LSAMP-201ENST00000333617 WFDC10AQ9H1F0 79 aa6.3□□□□□ -1.4
LSAMP-201ENST00000333617 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 PRSS29PA6NIE9 313 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 SIVA1O15304 175 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 CRLF1O75462 422 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
LSAMP-201ENST00000333617 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
LSAMP-201ENST00000333617 PCP2Q8IVA1 136 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 IL17DQ8TAD2 202 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 TMEM263Q8WUH6 116 aaKnown RBP6.29□□□□□ -1.4
LSAMP-201ENST00000333617 TIMM17AQ99595 171 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 C1QTNF4Q9BXJ3 329 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 NBEAL2Q6ZNJ1 2754 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 CMYA5Q8N3K9 4069 aa6.29□□□□□ -1.4
LSAMP-201ENST00000333617 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 IGHV3-53P01767 116 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 GIG44P09565 113 aaPredicted RBP6.28□□□□□ -1.4
LSAMP-201ENST00000333617 P0DMU3 169 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 FAM231AP0DMU4 169 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 FAM231CP0DMU5 169 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 BVES-AS1Q5T3Y7 98 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 Q6ZSN1 163 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 RNASE8Q8TDE3 154 aaKnown RBP6.28□□□□□ -1.4
LSAMP-201ENST00000333617 DNAJC30Q96LL9 226 aa6.28□□□□□ -1.4
LSAMP-201ENST00000333617 TRGV1A0A0A0MS02 117 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 PMVKQ15126 192 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 TMEM97Q5BJF2 176 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 C20orf203Q8NBC4 194 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 INSL3P51460 131 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 OR4C5Q8NGB2 326 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 C16orf74Q96GX8 76 aa6.27□□□□□ -1.41
LSAMP-201ENST00000333617 C9orf118A6NHY6 69 aa6.26□□□□□ -1.41
LSAMP-201ENST00000333617 ZNF25P17030 456 aaPredicted RBP6.26□□□□□ -1.41
LSAMP-201ENST00000333617 HSD52Q0P140 79 aa6.26□□□□□ -1.41
LSAMP-201ENST00000333617 DAZ2Q13117 558 aaKnown RBP6.26□□□□□ -1.41
LSAMP-201ENST00000333617 C9orf66Q5T8R8 295 aa6.26□□□□□ -1.41
LSAMP-201ENST00000333617 CSNK1G2-AS1Q8NCQ2 148 aa6.26□□□□□ -1.41
LSAMP-201ENST00000333617 CST9LQ9H4G1 147 aa6.26□□□□□ -1.41
LSAMP-201ENST00000333617 IGLV4-69A0A075B6H9 119 aa6.25□□□□□ -1.41
LSAMP-201ENST00000333617 TRAV4A0A0B4J268 109 aa6.25□□□□□ -1.41
LSAMP-201ENST00000333617 Q6ZTI0 123 aa6.25□□□□□ -1.41
LSAMP-201ENST00000333617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.25□□□□□ -1.41
LSAMP-201ENST00000333617 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
LSAMP-201ENST00000333617 NOP10Q9NPE3 64 aaKnown RBP6.25□□□□□ -1.41
LSAMP-201ENST00000333617 HIGD1BQ9P298 99 aa6.25□□□□□ -1.41
LSAMP-201ENST00000333617 Q9UF83 564 aa6.25□□□□□ -1.41
LSAMP-201ENST00000333617 TRAV8-6A0A0B4J262 113 aa6.24□□□□□ -1.41
LSAMP-201ENST00000333617 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
LSAMP-201ENST00000333617 SEC11AP67812 179 aa6.24□□□□□ -1.41
LSAMP-201ENST00000333617 RRN3P1Q2M238 152 aa6.24□□□□□ -1.41
LSAMP-201ENST00000333617 OR11H2Q8NH07 326 aa6.24□□□□□ -1.41
LSAMP-201ENST00000333617 CITED1Q99966 193 aa6.24□□□□□ -1.41
LSAMP-201ENST00000333617 TRBV25-1A0A075B6N4 114 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 PLAC8L1A1L4L8 177 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 E9PLD3 99 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 EMP1P54849 157 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 HERVK_113P61574 105 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 COTL1Q14019 142 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 OPRPNQ99935 248 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-201ENST00000333617 VCX2Q9H322 139 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 PYGO1Q9Y3Y4 419 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 COX11Q9Y6N1 276 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 IGLV4-3A0A075B6K6 122 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 IGHV3-38A0A0C4DH36 116 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 K7EQD1 137 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 GAGE1Q13065 139 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 MAPKAPK5-AS1Q8N8E1 139 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 PHLDA1Q8WV24 401 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-201ENST00000333617 OVOL2Q9BRP0 275 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 PRADC1Q9BSG0 188 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 CHCHD7Q9BUK0 85 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 CHAC1Q9BUX1 264 aa6.23□□□□□ -1.41
LSAMP-201ENST00000333617 TRGV2A0A075B6R0 118 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 TRBV10-1A0A0K0K1A3 114 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 GAGE12BA1L429 117 aa6.22□□□□□ -1.41
LSAMP-201ENST00000333617 A6NDN8 102 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms