RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CHCHD5Q9BSY4 110 aa17.58■□□□□ 0.41
SMDT1-201ENST00000331479 TRBV27A0A0K0K1C4 114 aa17.57■□□□□ 0.4
SMDT1-201ENST00000331479 HLA-DQA1P01909 254 aa17.57■□□□□ 0.4
SMDT1-201ENST00000331479 C20orf78Q9BR46 151 aa17.57■□□□□ 0.4
SMDT1-201ENST00000331479 TSHBP01222 138 aa17.56■□□□□ 0.4
SMDT1-201ENST00000331479 APCSP02743 223 aa17.56■□□□□ 0.4
SMDT1-201ENST00000331479 KIAA1644Q3SXP7 199 aa17.56■□□□□ 0.4
SMDT1-201ENST00000331479 SMCO4Q9NRQ5 59 aa17.56■□□□□ 0.4
SMDT1-201ENST00000331479 DNAH17Q9UFH2 4485 aa17.55■□□□□ 0.4
SMDT1-201ENST00000331479 TRAV9-2A0A087WT02 112 aa17.55■□□□□ 0.4
SMDT1-201ENST00000331479 TMEM262E9PQX1 116 aa17.55■□□□□ 0.4
SMDT1-201ENST00000331479 VCYO14598 125 aa17.55■□□□□ 0.4
SMDT1-201ENST00000331479 AMTP48728 403 aa17.55■□□□□ 0.4
SMDT1-201ENST00000331479 COX19Q49B96 90 aa17.55■□□□□ 0.4
SMDT1-201ENST00000331479 PHOX2AO14813 284 aa17.54■□□□□ 0.4
SMDT1-201ENST00000331479 GAGE6Q13070 117 aa17.54■□□□□ 0.4
SMDT1-201ENST00000331479 TMEM243Q9BU79 118 aa17.54■□□□□ 0.4
SMDT1-201ENST00000331479 MPV17L2Q567V2 206 aa17.53■□□□□ 0.4
SMDT1-201ENST00000331479 FAT2Q9NYQ8 4349 aa17.53■□□□□ 0.4
SMDT1-201ENST00000331479 A0A087WX48 190 aa17.52■□□□□ 0.39
SMDT1-201ENST00000331479 K7EP13 123 aa17.52■□□□□ 0.39
SMDT1-201ENST00000331479 RPL32P62910 135 aaKnown RBP17.52■□□□□ 0.39
SMDT1-201ENST00000331479 MRPL18Q9H0U6 180 aaKnown RBP17.52■□□□□ 0.39
SMDT1-201ENST00000331479 MT-ND6P03923 174 aa17.51■□□□□ 0.39
SMDT1-201ENST00000331479 C1orf134Q5TEV5 83 aa17.51■□□□□ 0.39
SMDT1-201ENST00000331479 CHCHD7Q9BUK0 85 aa17.51■□□□□ 0.39
SMDT1-201ENST00000331479 SMIM2Q9BVW6 85 aa17.51■□□□□ 0.39
SMDT1-201ENST00000331479 LAMTOR2Q9Y2Q5 125 aa17.51■□□□□ 0.39
SMDT1-201ENST00000331479 C6orf223Q8N319 242 aa17.5■□□□□ 0.39
SMDT1-201ENST00000331479 C10orf126Q8N4M7 172 aa17.5■□□□□ 0.39
SMDT1-201ENST00000331479 Q8N976 141 aa17.5■□□□□ 0.39
SMDT1-201ENST00000331479 LOC389332A0A1B0GUA5 103 aa17.49■□□□□ 0.39
SMDT1-201ENST00000331479 IBA57-AS1B1ANH7 110 aa17.49■□□□□ 0.39
SMDT1-201ENST00000331479 RTL8CO15255 209 aa17.49■□□□□ 0.39
SMDT1-201ENST00000331479 FABP9Q0Z7S8 132 aa17.49■□□□□ 0.39
SMDT1-201ENST00000331479 KIR2DL4Q99706 377 aa17.49■□□□□ 0.39
SMDT1-201ENST00000331479 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.48■□□□□ 0.39
SMDT1-201ENST00000331479 IGKV2-29A2NJV5 120 aaPredicted RBP17.48■□□□□ 0.39
SMDT1-201ENST00000331479 ESDP10768 282 aa17.48■□□□□ 0.39
SMDT1-201ENST00000331479 TRAPPC1Q9Y5R8 145 aa17.48■□□□□ 0.39
SMDT1-201ENST00000331479 PRSS47A8MTI9 375 aa17.47■□□□□ 0.39
SMDT1-201ENST00000331479 UBE2L6O14933 153 aa17.47■□□□□ 0.39
SMDT1-201ENST00000331479 FCER1GP30273 86 aa17.47■□□□□ 0.39
SMDT1-201ENST00000331479 RBX1P62877 108 aa17.47■□□□□ 0.39
SMDT1-201ENST00000331479 MAP1LC3AQ9H492 121 aa17.47■□□□□ 0.39
SMDT1-201ENST00000331479 KLK12Q9UKR0 248 aa17.47■□□□□ 0.39
SMDT1-201ENST00000331479 SCO1O75880 301 aa17.46■□□□□ 0.39
SMDT1-201ENST00000331479 PKIAP61925 76 aa17.46■□□□□ 0.39
SMDT1-201ENST00000331479 ALKBH7Q9BT30 221 aaPredicted RBP17.45■□□□□ 0.38
SMDT1-201ENST00000331479 TCAPO15273 167 aa17.45■□□□□ 0.38
SMDT1-201ENST00000331479 BTF3P20290 206 aaKnown RBP17.44■□□□□ 0.38
SMDT1-201ENST00000331479 IGLV4-60A0A075B6I1 120 aa17.43■□□□□ 0.38
SMDT1-201ENST00000331479 ANGP03950 147 aaKnown RBP17.43■□□□□ 0.38
SMDT1-201ENST00000331479 Q9HAA7 133 aa17.43■□□□□ 0.38
SMDT1-201ENST00000331479 A0A1B0GUV1 79 aa17.42■□□□□ 0.38
SMDT1-201ENST00000331479 LAGE3Q14657 143 aa17.42■□□□□ 0.38
SMDT1-201ENST00000331479 Q6ZRN7 208 aaPredicted RBP17.42■□□□□ 0.38
SMDT1-201ENST00000331479 H7C423 109 aa17.41■□□□□ 0.38
SMDT1-201ENST00000331479 C20orf203Q8NBC4 194 aa17.41■□□□□ 0.38
SMDT1-201ENST00000331479 FGF6P10767 208 aa17.4■□□□□ 0.38
SMDT1-201ENST00000331479 Q8N8P6 123 aa17.4■□□□□ 0.38
SMDT1-201ENST00000331479 UBE2WQ96B02 151 aa17.4■□□□□ 0.38
SMDT1-201ENST00000331479 ATP6V1G1O75348 118 aa17.4■□□□□ 0.38
SMDT1-201ENST00000331479 IFI27P40305 119 aaPredicted RBP17.4■□□□□ 0.38
SMDT1-201ENST00000331479 COLCA2A8K830 154 aa17.39■□□□□ 0.37
SMDT1-201ENST00000331479 RNASEKQ6P5S7 137 aaKnown RBP17.39■□□□□ 0.37
SMDT1-201ENST00000331479 ENHOQ6UWT2 76 aa17.39■□□□□ 0.37
SMDT1-201ENST00000331479 AMMECR1LQ6DCA0 310 aa17.38■□□□□ 0.37
SMDT1-201ENST00000331479 LINC00269Q8N2A0 174 aa17.38■□□□□ 0.37
SMDT1-201ENST00000331479 RAB5AP20339 215 aa17.37■□□□□ 0.37
SMDT1-201ENST00000331479 CLPSL2Q6UWE3 100 aa17.37■□□□□ 0.37
SMDT1-201ENST00000331479 NFE4Q86UQ8 179 aa17.37■□□□□ 0.37
SMDT1-201ENST00000331479 TRAV8-3A0A0A6YYJ7 113 aa17.36■□□□□ 0.37
SMDT1-201ENST00000331479 NXT2Q9NPJ8 142 aaKnown RBP17.36■□□□□ 0.37
SMDT1-201ENST00000331479 PRR34Q9NV39 138 aa17.36■□□□□ 0.37
SMDT1-201ENST00000331479 RPL39P62891 51 aaKnown RBP17.35■□□□□ 0.37
SMDT1-201ENST00000331479 DNAH11Q96DT5 4516 aa17.34■□□□□ 0.37
SMDT1-201ENST00000331479 PKD1P98161 4303 aa17.34■□□□□ 0.37
SMDT1-201ENST00000331479 TNP2Q05952 138 aa17.34■□□□□ 0.37
SMDT1-201ENST00000331479 LINC00336Q6ZUF6 198 aa17.34■□□□□ 0.37
SMDT1-201ENST00000331479 MRPL52Q86TS9 123 aaKnown RBP17.34■□□□□ 0.37
SMDT1-201ENST00000331479 PRSS29PA6NIE9 313 aa17.33■□□□□ 0.37
SMDT1-201ENST00000331479 CRPP02741 224 aa17.33■□□□□ 0.37
SMDT1-201ENST00000331479 ZNF25P17030 456 aaPredicted RBP17.33■□□□□ 0.37
SMDT1-201ENST00000331479 S100A1P23297 94 aa17.33■□□□□ 0.37
SMDT1-201ENST00000331479 UBE2D4Q9Y2X8 147 aa17.33■□□□□ 0.37
SMDT1-201ENST00000331479 REG3AQ06141 175 aa17.32■□□□□ 0.36
SMDT1-201ENST00000331479 PRSS3P2Q8NHM4 247 aa17.32■□□□□ 0.36
SMDT1-201ENST00000331479 Q0VG73 95 aa17.32■□□□□ 0.36
SMDT1-201ENST00000331479 TMEM18Q96B42 140 aa17.32■□□□□ 0.36
SMDT1-201ENST00000331479 TRGC2P03986 189 aa17.31■□□□□ 0.36
SMDT1-201ENST00000331479 OR5A1Q8NGJ0 315 aa17.31■□□□□ 0.36
SMDT1-201ENST00000331479 C18orf32Q8TCD1 76 aa17.31■□□□□ 0.36
SMDT1-201ENST00000331479 TMEM101Q96IK0 257 aa17.31■□□□□ 0.36
SMDT1-201ENST00000331479 K7EMI3 77 aa17.3■□□□□ 0.36
SMDT1-201ENST00000331479 IGKV2D-24A0A075B6R9 120 aa17.29■□□□□ 0.36
SMDT1-201ENST00000331479 ORMDL2Q53FV1 153 aa17.29■□□□□ 0.36
SMDT1-201ENST00000331479 CDC42SE2Q9NRR3 84 aa17.29■□□□□ 0.36
SMDT1-201ENST00000331479 MIAQ16674 131 aa17.28■□□□□ 0.36
SMDT1-201ENST00000331479 CSDC2Q9Y534 153 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms