RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 APCSP02743 223 aa10.88□□□□□ -0.67
LRRC28-202ENST00000331450 Q8N3U1 123 aa10.88□□□□□ -0.67
LRRC28-202ENST00000331450 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
LRRC28-202ENST00000331450 VCYO14598 125 aa10.87□□□□□ -0.67
LRRC28-202ENST00000331450 PMCHP20382 165 aa10.87□□□□□ -0.67
LRRC28-202ENST00000331450 AMTP48728 403 aa10.87□□□□□ -0.67
LRRC28-202ENST00000331450 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
LRRC28-202ENST00000331450 MRPL18Q9H0U6 180 aaKnown RBP10.87□□□□□ -0.67
LRRC28-202ENST00000331450 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
LRRC28-202ENST00000331450 CHCHD5Q9BSY4 110 aa10.86□□□□□ -0.67
LRRC28-202ENST00000331450 TMEM243Q9BU79 118 aa10.86□□□□□ -0.67
LRRC28-202ENST00000331450 CHCHD7Q9BUK0 85 aa10.86□□□□□ -0.67
LRRC28-202ENST00000331450 ATP6V1G1O75348 118 aa10.85□□□□□ -0.67
LRRC28-202ENST00000331450 IGHV3-30P01768 117 aa10.85□□□□□ -0.67
LRRC28-202ENST00000331450 IGHV3-33P01772 117 aa10.85□□□□□ -0.67
LRRC28-202ENST00000331450 IGHV3-30-3P0DP02 117 aa10.85□□□□□ -0.67
LRRC28-202ENST00000331450 IGHV3-30-5P0DP03 117 aa10.85□□□□□ -0.67
LRRC28-202ENST00000331450 ESDP10768 282 aa10.85□□□□□ -0.67
LRRC28-202ENST00000331450 KMT2AQ03164 3969 aa10.84□□□□□ -0.67
LRRC28-202ENST00000331450 PKIAP61925 76 aa10.84□□□□□ -0.67
LRRC28-202ENST00000331450 MPV17L2Q567V2 206 aa10.84□□□□□ -0.67
LRRC28-202ENST00000331450 C10orf126Q8N4M7 172 aa10.84□□□□□ -0.67
LRRC28-202ENST00000331450 ALKBH7Q9BT30 221 aaPredicted RBP10.84□□□□□ -0.67
LRRC28-202ENST00000331450 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
LRRC28-202ENST00000331450 TRAPPC1Q9Y5R8 145 aa10.84□□□□□ -0.67
LRRC28-202ENST00000331450 RYR3Q15413 4870 aa10.84□□□□□ -0.67
LRRC28-202ENST00000331450 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
LRRC28-202ENST00000331450 SCO1O75880 301 aa10.83□□□□□ -0.68
LRRC28-202ENST00000331450 FABP9Q0Z7S8 132 aa10.83□□□□□ -0.68
LRRC28-202ENST00000331450 GAGE6Q13070 117 aa10.83□□□□□ -0.68
LRRC28-202ENST00000331450 KIR2DL4Q99706 377 aa10.83□□□□□ -0.68
LRRC28-202ENST00000331450 A0A087WX48 190 aa10.82□□□□□ -0.68
LRRC28-202ENST00000331450 COLCA2A8K830 154 aa10.82□□□□□ -0.68
LRRC28-202ENST00000331450 IBA57-AS1B1ANH7 110 aa10.82□□□□□ -0.68
LRRC28-202ENST00000331450 BTF3P20290 206 aaKnown RBP10.82□□□□□ -0.68
LRRC28-202ENST00000331450 S100A1P23297 94 aa10.82□□□□□ -0.68
LRRC28-202ENST00000331450 H7C423 109 aa10.81□□□□□ -0.68
LRRC28-202ENST00000331450 TCAPO15273 167 aa10.81□□□□□ -0.68
LRRC28-202ENST00000331450 FCER1GP30273 86 aa10.81□□□□□ -0.68
LRRC28-202ENST00000331450 RBX1P62877 108 aa10.81□□□□□ -0.68
LRRC28-202ENST00000331450 LAGE3Q14657 143 aa10.81□□□□□ -0.68
LRRC28-202ENST00000331450 Q8N976 141 aa10.81□□□□□ -0.68
LRRC28-202ENST00000331450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.8□□□□□ -0.68
LRRC28-202ENST00000331450 LOC389332A0A1B0GUA5 103 aa10.8□□□□□ -0.68
LRRC28-202ENST00000331450 A0A1B0GUV1 79 aa10.8□□□□□ -0.68
LRRC28-202ENST00000331450 IGKV2-29A2NJV5 120 aaPredicted RBP10.8□□□□□ -0.68
LRRC28-202ENST00000331450 TMEM262E9PQX1 116 aa10.8□□□□□ -0.68
LRRC28-202ENST00000331450 C6orf223Q8N319 242 aa10.8□□□□□ -0.68
LRRC28-202ENST00000331450 Q8N8P6 123 aa10.8□□□□□ -0.68
LRRC28-202ENST00000331450 UBE2L6O14933 153 aa10.79□□□□□ -0.68
LRRC28-202ENST00000331450 Q6ZRN7 208 aaPredicted RBP10.79□□□□□ -0.68
LRRC28-202ENST00000331450 NXT2Q9NPJ8 142 aaKnown RBP10.79□□□□□ -0.68
LRRC28-202ENST00000331450 IGLV4-60A0A075B6I1 120 aa10.78□□□□□ -0.68
LRRC28-202ENST00000331450 RTL8CO15255 209 aa10.78□□□□□ -0.68
LRRC28-202ENST00000331450 FGF6P10767 208 aa10.78□□□□□ -0.68
LRRC28-202ENST00000331450 C1orf134Q5TEV5 83 aa10.78□□□□□ -0.68
LRRC28-202ENST00000331450 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
LRRC28-202ENST00000331450 C20orf203Q8NBC4 194 aa10.78□□□□□ -0.68
LRRC28-202ENST00000331450 KLK12Q9UKR0 248 aa10.78□□□□□ -0.68
LRRC28-202ENST00000331450 K7EMI3 77 aa10.77□□□□□ -0.69
LRRC28-202ENST00000331450 ZNF25P17030 456 aaPredicted RBP10.77□□□□□ -0.69
LRRC28-202ENST00000331450 RAB5AP20339 215 aa10.77□□□□□ -0.69
LRRC28-202ENST00000331450 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.69
LRRC28-202ENST00000331450 C18orf32Q8TCD1 76 aa10.77□□□□□ -0.69
LRRC28-202ENST00000331450 PRR34Q9NV39 138 aa10.77□□□□□ -0.69
LRRC28-202ENST00000331450 LINC01546A6NGU7 62 aa10.76□□□□□ -0.69
LRRC28-202ENST00000331450 ANGP03950 147 aaKnown RBP10.76□□□□□ -0.69
LRRC28-202ENST00000331450 ENHOQ6UWT2 76 aa10.75□□□□□ -0.69
LRRC28-202ENST00000331450 UBE2D4Q9Y2X8 147 aa10.75□□□□□ -0.69
LRRC28-202ENST00000331450 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
LRRC28-202ENST00000331450 TRGC2P03986 189 aa10.74□□□□□ -0.69
LRRC28-202ENST00000331450 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
LRRC28-202ENST00000331450 AMMECR1LQ6DCA0 310 aa10.74□□□□□ -0.69
LRRC28-202ENST00000331450 RNASEKQ6P5S7 137 aaKnown RBP10.74□□□□□ -0.69
LRRC28-202ENST00000331450 NFE4Q86UQ8 179 aa10.74□□□□□ -0.69
LRRC28-202ENST00000331450 TIMM21Q9BVV7 248 aa10.74□□□□□ -0.69
LRRC28-202ENST00000331450 CSDC2Q9Y534 153 aaKnown RBP10.74□□□□□ -0.69
LRRC28-202ENST00000331450 ORMDL2Q53FV1 153 aa10.73□□□□□ -0.69
LRRC28-202ENST00000331450 LINC00269Q8N2A0 174 aa10.73□□□□□ -0.69
LRRC28-202ENST00000331450 PRSS3P2Q8NHM4 247 aa10.73□□□□□ -0.69
LRRC28-202ENST00000331450 UBE2WQ96B02 151 aa10.73□□□□□ -0.69
LRRC28-202ENST00000331450 TMEM18Q96B42 140 aa10.73□□□□□ -0.69
LRRC28-202ENST00000331450 URB1-AS1Q96HZ7 61 aa10.73□□□□□ -0.69
LRRC28-202ENST00000331450 Q9HAA7 133 aa10.73□□□□□ -0.69
LRRC28-202ENST00000331450 REG3AQ06141 175 aa10.72□□□□□ -0.69
LRRC28-202ENST00000331450 Q0VG73 95 aa10.72□□□□□ -0.69
LRRC28-202ENST00000331450 CLPSL2Q6UWE3 100 aa10.72□□□□□ -0.69
LRRC28-202ENST00000331450 CRPP02741 224 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 SMAGPQ0VAQ4 97 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 MIAQ16674 131 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 LINC00336Q6ZUF6 198 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 OR5A1Q8NGJ0 315 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 FAM104AQ969W3 186 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 TMEM101Q96IK0 257 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 CDC42SE2Q9NRR3 84 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 SPANXA1Q9NS26 97 aa10.71□□□□□ -0.69
LRRC28-202ENST00000331450 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
LRRC28-202ENST00000331450 CYSLTR1Q9Y271 337 aa10.7□□□□□ -0.7
LRRC28-202ENST00000331450 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
LRRC28-202ENST00000331450 Q6ZUT4 128 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms