RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 Q6ZS46 218 aa12.4□□□□□ -0.42
SMAD3-201ENST00000327367 Q6ZTI0 123 aa12.4□□□□□ -0.42
SMAD3-201ENST00000327367 RNF138Q8WVD3 245 aa12.4□□□□□ -0.42
SMAD3-201ENST00000327367 C20orf173Q96LM9 149 aa12.4□□□□□ -0.42
SMAD3-201ENST00000327367 H7C423 109 aa12.4□□□□□ -0.42
SMAD3-201ENST00000327367 C6orf99Q4VX62 202 aa12.4□□□□□ -0.42
SMAD3-201ENST00000327367 PLXNA2O75051 1894 aa12.4□□□□□ -0.42
SMAD3-201ENST00000327367 ZSWIM8A7E2V4 1837 aa12.4□□□□□ -0.43
SMAD3-201ENST00000327367 K7ENP7 123 aa12.4□□□□□ -0.43
SMAD3-201ENST00000327367 FAM19A3Q7Z5A8 133 aa12.39□□□□□ -0.43
SMAD3-201ENST00000327367 KLK5Q9Y337 293 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-201ENST00000327367 CRIP1P50238 77 aa12.39□□□□□ -0.43
SMAD3-201ENST00000327367 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
SMAD3-201ENST00000327367 REG3AQ06141 175 aa12.39□□□□□ -0.43
SMAD3-201ENST00000327367 ATP5EP56381 51 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-201ENST00000327367 ZNF295-AS1Q8N0V1 137 aa12.39□□□□□ -0.43
SMAD3-201ENST00000327367 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
SMAD3-201ENST00000327367 ZGRF1Q86YA3 2104 aa12.38□□□□□ -0.43
SMAD3-201ENST00000327367 A0A0J9YX75 114 aa12.38□□□□□ -0.43
SMAD3-201ENST00000327367 CELA1Q9UNI1 258 aa12.38□□□□□ -0.43
SMAD3-201ENST00000327367 NRGNQ92686 78 aa12.38□□□□□ -0.43
SMAD3-201ENST00000327367 SPTBN2O15020 2390 aa12.38□□□□□ -0.43
SMAD3-201ENST00000327367 C9orf66Q5T8R8 295 aa12.38□□□□□ -0.43
SMAD3-201ENST00000327367 Q8N7P7 452 aa12.38□□□□□ -0.43
SMAD3-201ENST00000327367 CHCHD10Q8WYQ3 142 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-201ENST00000327367 PLCE1Q9P212 2302 aa12.37□□□□□ -0.43
SMAD3-201ENST00000327367 ZFP36P26651 326 aaKnown RBP12.37□□□□□ -0.43
SMAD3-201ENST00000327367 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
SMAD3-201ENST00000327367 A0A087WVE0 104 aa12.37□□□□□ -0.43
SMAD3-201ENST00000327367 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
SMAD3-201ENST00000327367 TRBV6-5A0A0K0K1A5 114 aa12.37□□□□□ -0.43
SMAD3-201ENST00000327367 ABCA4P78363 2273 aa12.37□□□□□ -0.43
SMAD3-201ENST00000327367 NDUFC1O43677 76 aa12.36□□□□□ -0.43
SMAD3-201ENST00000327367 UFSP1Q6NVU6 142 aa12.36□□□□□ -0.43
SMAD3-201ENST00000327367 FAM19A5Q7Z5A7 132 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-201ENST00000327367 LINC00526Q96FQ7 95 aa12.36□□□□□ -0.43
SMAD3-201ENST00000327367 LINC01548A6NM66 108 aa12.35□□□□□ -0.43
SMAD3-201ENST00000327367 FRMPD3Q5JV73 1810 aa12.35□□□□□ -0.43
SMAD3-201ENST00000327367 IGKV2-28A0A075B6P5 120 aa12.35□□□□□ -0.43
SMAD3-201ENST00000327367 PSPHP1O15172 72 aa12.35□□□□□ -0.43
SMAD3-201ENST00000327367 IGKV2D-28P01615 120 aa12.35□□□□□ -0.43
SMAD3-201ENST00000327367 PPDPFQ9H3Y8 114 aa12.35□□□□□ -0.43
SMAD3-201ENST00000327367 IGFL3Q6UXB1 125 aa12.34□□□□□ -0.43
SMAD3-201ENST00000327367 CCDC140Q96MF4 163 aa12.34□□□□□ -0.43
SMAD3-201ENST00000327367 SPRY4Q9C004 299 aa12.34□□□□□ -0.43
SMAD3-201ENST00000327367 IMUPQ9GZP8 106 aa12.34□□□□□ -0.43
SMAD3-201ENST00000327367 Q6ZPA2 131 aa12.34□□□□□ -0.43
SMAD3-201ENST00000327367 C1orf229Q6ZS94 237 aaPredicted RBP12.34□□□□□ -0.43
SMAD3-201ENST00000327367 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
SMAD3-201ENST00000327367 SMIM26A0A096LP01 95 aa12.34□□□□□ -0.43
SMAD3-201ENST00000327367 MED13Q9UHV7 2174 aa12.33□□□□□ -0.43
SMAD3-201ENST00000327367 MIFP14174 115 aa12.33□□□□□ -0.44
SMAD3-201ENST00000327367 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
SMAD3-201ENST00000327367 SMIM11BQ8TCY0 68 aa12.33□□□□□ -0.44
SMAD3-201ENST00000327367 LST1O00453 97 aa12.33□□□□□ -0.44
SMAD3-201ENST00000327367 GAS8-AS1O95177 125 aa12.33□□□□□ -0.44
SMAD3-201ENST00000327367 Q6ZSR3 168 aa12.33□□□□□ -0.44
SMAD3-201ENST00000327367 GVINP1Q7Z2Y8 2422 aa12.33□□□□□ -0.44
SMAD3-201ENST00000327367 CRIP2P52943 208 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-201ENST00000327367 SPINK6Q6UWN8 80 aa12.32□□□□□ -0.44
SMAD3-201ENST00000327367 EBI3Q14213 229 aa12.32□□□□□ -0.44
SMAD3-201ENST00000327367 CACNA1GO43497 2377 aa12.32□□□□□ -0.44
SMAD3-201ENST00000327367 Q6ZQY7 126 aa12.32□□□□□ -0.44
SMAD3-201ENST00000327367 U3KQK5 164 aa12.32□□□□□ -0.44
SMAD3-201ENST00000327367 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
SMAD3-201ENST00000327367 K7EMT4 169 aa12.31□□□□□ -0.44
SMAD3-201ENST00000327367 FNDC1Q4ZHG4 1894 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-201ENST00000327367 GPHB5Q86YW7 130 aa12.31□□□□□ -0.44
SMAD3-201ENST00000327367 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
SMAD3-201ENST00000327367 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
SMAD3-201ENST00000327367 Q6ZSV7 163 aa12.3□□□□□ -0.44
SMAD3-201ENST00000327367 P0C879 139 aa12.3□□□□□ -0.44
SMAD3-201ENST00000327367 Q8N976 141 aa12.3□□□□□ -0.44
SMAD3-201ENST00000327367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.3□□□□□ -0.443e-7■■■□□ 16.9
SMAD3-201ENST00000327367 A0A087WZ39 114 aa12.3□□□□□ -0.44
SMAD3-201ENST00000327367 SERP1Q9Y6X1 66 aa12.3□□□□□ -0.44
SMAD3-201ENST00000327367 IGLV1-47P01700 117 aa12.29□□□□□ -0.44
SMAD3-201ENST00000327367 DNAJC9-AS1A6NH13 148 aa12.29□□□□□ -0.44
SMAD3-201ENST00000327367 CACNA1BQ00975 2339 aa12.28□□□□□ -0.44
SMAD3-201ENST00000327367 IBA57-AS1B1ANH7 110 aa12.28□□□□□ -0.44
SMAD3-201ENST00000327367 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
SMAD3-201ENST00000327367 MGAMO43451 1857 aa12.28□□□□□ -0.44
SMAD3-201ENST00000327367 MALRD1Q5VYJ5 2156 aa12.28□□□□□ -0.44
SMAD3-201ENST00000327367 M0QY20 66 aa12.28□□□□□ -0.44
SMAD3-201ENST00000327367 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.44
SMAD3-201ENST00000327367 MSMPQ1L6U9 139 aa12.27□□□□□ -0.45
SMAD3-201ENST00000327367 Q8N9L7 120 aa12.27□□□□□ -0.45
SMAD3-201ENST00000327367 SMAD5-AS1Q9Y6J3 95 aa12.27□□□□□ -0.45
SMAD3-201ENST00000327367 KIAA1549Q9HCM3 1950 aa12.26□□□□□ -0.45
SMAD3-201ENST00000327367 BRWD3Q6RI45 1802 aa12.26□□□□□ -0.45
SMAD3-201ENST00000327367 Q6JHZ5 121 aa12.25□□□□□ -0.45
SMAD3-201ENST00000327367 DENND4CQ5VZ89 1909 aa12.25□□□□□ -0.45
SMAD3-201ENST00000327367 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
SMAD3-201ENST00000327367 RPL37AP8A6NKH3 93 aa12.25□□□□□ -0.45
SMAD3-201ENST00000327367 PRM2P04554 102 aa12.25□□□□□ -0.45
SMAD3-201ENST00000327367 TANC2Q9HCD6 1990 aa12.25□□□□□ -0.45
SMAD3-201ENST00000327367 NRACQ8N912 160 aa12.24□□□□□ -0.45
SMAD3-201ENST00000327367 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-201ENST00000327367 BEAN1Q3B7T3 259 aa12.23□□□□□ -0.45
SMAD3-201ENST00000327367 WFDC10AQ9H1F0 79 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms