RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DEFB4AO15263 64 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 CA1P00915 261 aaPredicted RBP4.59□□□□□ -1.67
CSTF3-201ENST00000323959 PRR9Q5T870 116 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 Q8TAT8 98 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 MRAP2Q96G30 205 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 IGHV3OR16-8A0A075B7F1 116 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 ARMS2P0C7Q2 107 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 RPL35AP18077 110 aaKnown RBP4.59□□□□□ -1.67
CSTF3-201ENST00000323959 MPV17L2Q567V2 206 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 MRPL54Q6P161 138 aaKnown RBP4.59□□□□□ -1.67
CSTF3-201ENST00000323959 PGLYRP4Q96LB8 373 aa4.59□□□□□ -1.67
CSTF3-201ENST00000323959 NUDT3O95989 172 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 PPP1R17O96001 155 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 EDN2P20800 178 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 IGFL4Q6B9Z1 124 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 NEGR1Q7Z3B1 354 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 TMEM61Q8N0U2 210 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 MTURNQ8N3F0 131 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.68
CSTF3-201ENST00000323959 RNF185Q96GF1 192 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 SGK494Q96LW2 274 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 SIGMAR1Q99720 223 aa4.59□□□□□ -1.68
CSTF3-201ENST00000323959 LINC01549A6NIU2 74 aa4.58□□□□□ -1.68
CSTF3-201ENST00000323959 CRXO43186 299 aaPredicted RBP4.58□□□□□ -1.68
CSTF3-201ENST00000323959 UFSP1Q6NVU6 142 aa4.58□□□□□ -1.68
CSTF3-201ENST00000323959 TRPT1Q86TN4 253 aaKnown RBP4.58□□□□□ -1.68
CSTF3-201ENST00000323959 TRGV11A0A075B6L2 103 aa4.58□□□□□ -1.68
CSTF3-201ENST00000323959 IGHV3-49A0A0A0MS15 119 aa4.58□□□□□ -1.68
CSTF3-201ENST00000323959 TCL1AP56279 114 aa4.58□□□□□ -1.68
CSTF3-201ENST00000323959 SEC11AP67812 179 aa4.58□□□□□ -1.68
CSTF3-201ENST00000323959 SLC25A34Q6PIV7 304 aa4.58□□□□□ -1.68
CSTF3-201ENST00000323959 IGHV3OR16-13A0A075B7E8 117 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 IGHV3-74A0A0B4J1X5 117 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 TRAV8-6A0A0B4J262 113 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 RNASE3P12724 160 aaKnown RBP4.57□□□□□ -1.68
CSTF3-201ENST00000323959 HAMPP81172 84 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 PSMG4Q5JS54 123 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 Q6ZRN7 208 aaPredicted RBP4.57□□□□□ -1.68
CSTF3-201ENST00000323959 AP1S3Q96PC3 154 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 KIF25-AS1Q9Y6Z4 181 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 IGHV1OR15-1A0A075B7D0 117 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 IGHV3-16A0A0C4DH30 117 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 MUC21A0A0G2JKD1 596 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 MUC21A0A140T8X8 626 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 TEX48A0A1B0GUV7 120 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 ORM1P02763 201 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 SRIP30626 198 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 MUC21Q5SSG8 566 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 Q6ZRU5 148 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 ORMDL3Q8N138 153 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 OR5A1Q8NGJ0 315 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 URB1-AS1Q96HZ7 61 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 PMCHL2Q9BQD1 86 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 C20orf78Q9BR46 151 aa4.57□□□□□ -1.68
CSTF3-201ENST00000323959 TRBV6-5A0A0K0K1A5 114 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 NTF3P20783 257 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 ERASQ7Z444 233 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 ATOH7Q8N100 152 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 SPXQ9BT56 116 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 HSBP1O75506 76 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 AZU1P20160 251 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 MRPL51Q4U2R6 128 aaKnown RBP4.56□□□□□ -1.68
CSTF3-201ENST00000323959 DPH3P1Q9H4G8 78 aa4.56□□□□□ -1.68
CSTF3-201ENST00000323959 H3BRM9 83 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 K7EP34 96 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 ZNF688P0C7X2 276 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 LINC00315P59091 139 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 RPL11P62913 178 aaKnown RBP4.55□□□□□ -1.68
CSTF3-201ENST00000323959 FAM159AQ6UWV7 190 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 NXT2Q9NPJ8 142 aaKnown RBP4.55□□□□□ -1.68
CSTF3-201ENST00000323959 C9orf118A6NHY6 69 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 J3QR89 54 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 RNASE4P34096 147 aaKnown RBP4.55□□□□□ -1.68
CSTF3-201ENST00000323959 CKS1BP61024 79 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 HSD52Q0P140 79 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 FAM19A2Q8N3H0 131 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 NRACQ8N912 160 aa4.55□□□□□ -1.68
CSTF3-201ENST00000323959 A6NDN8 102 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 M0R2Z0 102 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 INSP01308 110 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 CAMPP49913 170 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 CRYBA4P53673 196 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 TWIST1Q15672 202 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 C1QTNF4Q9BXJ3 329 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 A0A087WTM6 91 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 F6UB75 175 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 CCL18P55774 89 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 DEFB131AP59861 70 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 ZFP2Q6ZN57 461 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 Q6ZSA8 131 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 Q8N8P6 123 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
CSTF3-201ENST00000323959 TRAV26-1A0A087WT03 109 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 SMAGPQ0VAQ4 97 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 KIAA1644Q3SXP7 199 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 C11orf72Q8NBR9 251 aa4.53□□□□□ -1.68
CSTF3-201ENST00000323959 OR10AG1Q8NH19 301 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms