RNA–Protein interactions for RNA: ENST00000322099.11

PCBP4-201, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 1,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-201ENST00000322099 XGP55808 180 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 RNF183Q96D59 192 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 SPANXDQ9BXN6 97 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 SPANXCQ9NY87 97 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 C9JAW5 83 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 DEFB113Q30KQ7 82 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 BEX4Q9NWD9 120 aaPredicted RBP11.59□□□□□ -0.55
PCBP4-201ENST00000322099 TNFRSF18Q9Y5U5 241 aa11.59□□□□□ -0.55
PCBP4-201ENST00000322099 HELZ2Q9BYK8 2649 aaKnown RBP11.58□□□□□ -0.56
PCBP4-201ENST00000322099 TINCRA0A1B0GVN0 87 aa11.58□□□□□ -0.56
PCBP4-201ENST00000322099 MT-ATP8P03928 68 aa11.58□□□□□ -0.56
PCBP4-201ENST00000322099 HOXD3P31249 432 aaPredicted RBP11.58□□□□□ -0.56
PCBP4-201ENST00000322099 C10orf99Q6UWK7 81 aa11.58□□□□□ -0.56
PCBP4-201ENST00000322099 LINC01356Q8N9X3 169 aa11.58□□□□□ -0.56
PCBP4-201ENST00000322099 LITAFQ99732 161 aa11.58□□□□□ -0.56
PCBP4-201ENST00000322099 IGHV3-64A0A075B6Q5 118 aa11.58□□□□□ -0.56
PCBP4-201ENST00000322099 FAM104AQ969W3 186 aa11.58□□□□□ -0.56
PCBP4-201ENST00000322099 DOPEY2Q9Y3R5 2298 aa11.57□□□□□ -0.56
PCBP4-201ENST00000322099 APCP25054 2843 aa11.57□□□□□ -0.56
PCBP4-201ENST00000322099 HIST2H2BCQ6DN03 193 aa11.57□□□□□ -0.56
PCBP4-201ENST00000322099 SPXQ9BT56 116 aa11.57□□□□□ -0.56
PCBP4-201ENST00000322099 Q1RN00 199 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 LRRC75A-AS1Q8N1F1 130 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 DNAJC30Q96LL9 226 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 VPREB3Q9UKI3 123 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 CELSR1Q9NYQ6 3014 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 TGFAP01135 160 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 RBMY1A1P0DJD3 496 aaKnown RBP11.56□□□□□ -0.56
PCBP4-201ENST00000322099 RBMY1CP0DJD4 496 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 ZNF415Q09FC8 603 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 RBMY1FQ15415 496 aaKnown RBP11.56□□□□□ -0.56
PCBP4-201ENST00000322099 LINC01620Q4KN68 170 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
PCBP4-201ENST00000322099 GEMIN7Q9H840 131 aaKnown RBP11.56□□□□□ -0.56
PCBP4-201ENST00000322099 TIMM17BO60830 172 aa11.55□□□□□ -0.56
PCBP4-201ENST00000322099 RPL13AP40429 203 aaKnown RBP11.55□□□□□ -0.56
PCBP4-201ENST00000322099 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
PCBP4-201ENST00000322099 NDUFA12Q9UI09 145 aa11.55□□□□□ -0.56
PCBP4-201ENST00000322099 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.54□□□□□ -0.566e-7■■□□□ 12.3
PCBP4-201ENST00000322099 H3BMM0 161 aa11.54□□□□□ -0.56
PCBP4-201ENST00000322099 MIAQ16674 131 aa11.54□□□□□ -0.56
PCBP4-201ENST00000322099 ZFHX3Q15911 3703 aa11.54□□□□□ -0.56
PCBP4-201ENST00000322099 TRBV10-2A0A0K0K1G8 114 aa11.54□□□□□ -0.56
PCBP4-201ENST00000322099 CHCHD7Q9BUK0 85 aa11.54□□□□□ -0.56
PCBP4-201ENST00000322099 UBE2D4Q9Y2X8 147 aa11.54□□□□□ -0.56
PCBP4-201ENST00000322099 H7C2G1 150 aa11.53□□□□□ -0.56
PCBP4-201ENST00000322099 IFITM1P13164 125 aa11.53□□□□□ -0.56
PCBP4-201ENST00000322099 DUX5Q96PT3 197 aa11.53□□□□□ -0.56
PCBP4-201ENST00000322099 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
PCBP4-201ENST00000322099 TRIAP1O43715 76 aa11.52□□□□□ -0.56
PCBP4-201ENST00000322099 COX6CP09669 75 aa11.52□□□□□ -0.56
PCBP4-201ENST00000322099 ZFAND6Q6FIF0 208 aa11.52□□□□□ -0.56
PCBP4-201ENST00000322099 ZNF702PQ9H963 129 aa11.52□□□□□ -0.56
PCBP4-201ENST00000322099 KNCNA6PVL3 124 aa11.52□□□□□ -0.57
PCBP4-201ENST00000322099 DEFB131AP59861 70 aa11.52□□□□□ -0.57
PCBP4-201ENST00000322099 KRTAP1-3Q8IUG1 177 aa11.52□□□□□ -0.57
PCBP4-201ENST00000322099 ZANQ9Y493 2812 aa11.51□□□□□ -0.57
PCBP4-201ENST00000322099 TRAV8-3A0A0A6YYJ7 113 aa11.51□□□□□ -0.57
PCBP4-201ENST00000322099 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
PCBP4-201ENST00000322099 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
PCBP4-201ENST00000322099 PRSS2P07478 247 aa11.51□□□□□ -0.57
PCBP4-201ENST00000322099 ICOSQ9Y6W8 199 aa11.51□□□□□ -0.57
PCBP4-201ENST00000322099 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 TIRAPP58753 221 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 BEAN1Q3B7T3 259 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 Q6YL49 198 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 IGLV5-45A0A087WSX0 123 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 PROK1P58294 105 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
PCBP4-201ENST00000322099 Q96MF0 132 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 CITED1Q99966 193 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 PEMTQ9UBM1 199 aa11.5□□□□□ -0.57
PCBP4-201ENST00000322099 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
PCBP4-201ENST00000322099 H3BT86 120 aa11.49□□□□□ -0.57
PCBP4-201ENST00000322099 FSHBP01225 129 aa11.49□□□□□ -0.57
PCBP4-201ENST00000322099 HTN1P15515 57 aa11.49□□□□□ -0.57
PCBP4-201ENST00000322099 ADAMTSL4-AS1Q5T5F5 129 aa11.49□□□□□ -0.57
PCBP4-201ENST00000322099 CEMP1Q6PRD7 247 aaPredicted RBP11.49□□□□□ -0.57
PCBP4-201ENST00000322099 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
PCBP4-201ENST00000322099 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
PCBP4-201ENST00000322099 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
PCBP4-201ENST00000322099 TEX29Q8N6K0 151 aa11.48□□□□□ -0.57
PCBP4-201ENST00000322099 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
PCBP4-201ENST00000322099 TMEM61Q8N0U2 210 aa11.48□□□□□ -0.57
PCBP4-201ENST00000322099 NDUFA1O15239 70 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 C11orf72Q8NBR9 251 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 UBE2WQ96B02 151 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 CR1P17927 2039 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 RS1O15537 224 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 Q6ZSN1 163 aa11.47□□□□□ -0.57
PCBP4-201ENST00000322099 NBPF19A0A087WUL8 3843 aa11.46□□□□□ -0.57
PCBP4-201ENST00000322099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.46□□□□□ -0.58
PCBP4-201ENST00000322099 IGKV2-29A2NJV5 120 aaPredicted RBP11.46□□□□□ -0.58
PCBP4-201ENST00000322099 INSP01308 110 aa11.46□□□□□ -0.58
PCBP4-201ENST00000322099 Q6Q795 121 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms