RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 C3orf56Q8N813 242 aa12.19□□□□□ -0.46
SSR4-201ENST00000320857 ZNF479Q96JC4 524 aa12.19□□□□□ -0.46
SSR4-201ENST00000320857 PYGO1Q9Y3Y4 419 aa12.19□□□□□ -0.46
SSR4-201ENST00000320857 TRBV10-1A0A0K0K1A3 114 aa12.19□□□□□ -0.46
SSR4-201ENST00000320857 HSD52Q0P140 79 aa12.19□□□□□ -0.46
SSR4-201ENST00000320857 HIGD1BQ9P298 99 aa12.19□□□□□ -0.46
SSR4-201ENST00000320857 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
SSR4-201ENST00000320857 K7EQD1 137 aa12.18□□□□□ -0.46
SSR4-201ENST00000320857 NPSP0C0P6 89 aa12.18□□□□□ -0.46
SSR4-201ENST00000320857 COTL1Q14019 142 aa12.18□□□□□ -0.46
SSR4-201ENST00000320857 Q9UF83 564 aa12.18□□□□□ -0.46
SSR4-201ENST00000320857 COL6A5A8TX70 2615 aa12.18□□□□□ -0.46
SSR4-201ENST00000320857 WFDC9Q8NEX5 89 aa12.17□□□□□ -0.46
SSR4-201ENST00000320857 OR11H2Q8NH07 326 aa12.17□□□□□ -0.46
SSR4-201ENST00000320857 NACAE9PAV3 2078 aa12.17□□□□□ -0.46
SSR4-201ENST00000320857 TENM1Q9UKZ4 2725 aa12.17□□□□□ -0.46
SSR4-201ENST00000320857 TRGV2A0A075B6R0 118 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 E9PLD3 99 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 CRYBA4P53673 196 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 HERVK_113P61574 105 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 RPL36AP83881 106 aaKnown RBP12.16□□□□□ -0.46
SSR4-201ENST00000320857 RPL36ALQ969Q0 106 aaKnown RBP12.16□□□□□ -0.46
SSR4-201ENST00000320857 VCX2Q9H322 139 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 IGLV4-3A0A075B6K6 122 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 TRBV7-3A0A075B6L6 115 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 TRAV8-6A0A0B4J262 113 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 GAGE7O76087 117 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 PHLDA1Q8WV24 401 aaPredicted RBP12.16□□□□□ -0.46
SSR4-201ENST00000320857 CHCHD7Q9BUK0 85 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 SPANXA1Q9NS26 97 aa12.16□□□□□ -0.46
SSR4-201ENST00000320857 SEC11AP67812 179 aa12.15□□□□□ -0.46
SSR4-201ENST00000320857 OPRPNQ99935 248 aaPredicted RBP12.15□□□□□ -0.46
SSR4-201ENST00000320857 TTTY13Q9BZ97 58 aa12.15□□□□□ -0.46
SSR4-201ENST00000320857 IGHV3-38A0A0C4DH36 116 aa12.14□□□□□ -0.47
SSR4-201ENST00000320857 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
SSR4-201ENST00000320857 TRBV25-1A0A075B6N4 114 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
SSR4-201ENST00000320857 MAPKAPK5-AS1Q8N8E1 139 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 ORAOV1Q8WV07 137 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 PRADC1Q9BSG0 188 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 EMP1P54849 157 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 DAZ4Q86SG3 579 aaKnown RBP12.13□□□□□ -0.47
SSR4-201ENST00000320857 SLC25A29Q8N8R3 303 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 CHAC1Q9BUX1 264 aa12.13□□□□□ -0.47
SSR4-201ENST00000320857 DAZ3Q9NR90 486 aaKnown RBP12.13□□□□□ -0.47
SSR4-201ENST00000320857 MYMXA0A1B0GTQ4 84 aa12.12□□□□□ -0.47
SSR4-201ENST00000320857 WIPF1O43516 503 aa12.12□□□□□ -0.47
SSR4-201ENST00000320857 KRTAP21-3Q3LHN1 58 aa12.12□□□□□ -0.47
SSR4-201ENST00000320857 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
SSR4-201ENST00000320857 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
SSR4-201ENST00000320857 AMELXQ99217 191 aa12.12□□□□□ -0.47
SSR4-201ENST00000320857 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
SSR4-201ENST00000320857 APOC4P55056 127 aa12.11□□□□□ -0.47
SSR4-201ENST00000320857 UBE2D4Q9Y2X8 147 aa12.11□□□□□ -0.47
SSR4-201ENST00000320857 STAB1Q9NY15 2570 aa12.11□□□□□ -0.47
SSR4-201ENST00000320857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.1□□□□□ -0.47
SSR4-201ENST00000320857 TRGV4A0A0C4DH28 118 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 TRBV6-4A0A1B0GX49 114 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 IGKV2-29A2NJV5 120 aaPredicted RBP12.1□□□□□ -0.47
SSR4-201ENST00000320857 A6NDN8 102 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 UBE2D3P61077 147 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 UBE2D2P62837 147 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 COX11Q9Y6N1 276 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 GAGE12JA6NER3 117 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 GAGE1Q13065 139 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 GAGE4Q13068 117 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 GAGE5Q13069 117 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 GAGE13Q4V321 117 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 SHISA2Q6UWI4 295 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 TIMM21Q9BVV7 248 aa12.1□□□□□ -0.47
SSR4-201ENST00000320857 VWFP04275 2813 aa12.09□□□□□ -0.47
SSR4-201ENST00000320857 TAX1BP3O14907 124 aa12.08□□□□□ -0.48
SSR4-201ENST00000320857 TAL2Q16559 108 aa12.08□□□□□ -0.48
SSR4-201ENST00000320857 CEMP1Q6PRD7 247 aaPredicted RBP12.08□□□□□ -0.48
SSR4-201ENST00000320857 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
SSR4-201ENST00000320857 X6R8D5 127 aa12.08□□□□□ -0.48
SSR4-201ENST00000320857 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
SSR4-201ENST00000320857 MRPS36P82909 103 aaKnown RBP12.07□□□□□ -0.48
SSR4-201ENST00000320857 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
SSR4-201ENST00000320857 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
SSR4-201ENST00000320857 ZNF815PA8K554 130 aa12.06□□□□□ -0.48
SSR4-201ENST00000320857 FHL2Q14192 279 aa12.06□□□□□ -0.48
SSR4-201ENST00000320857 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
SSR4-201ENST00000320857 TMEM223A0PJW6 202 aa12.06□□□□□ -0.48
SSR4-201ENST00000320857 ZNF22P17026 224 aaPredicted RBP12.06□□□□□ -0.48
SSR4-201ENST00000320857 GCSHP23434 173 aa12.06□□□□□ -0.48
SSR4-201ENST00000320857 DGAT2L7PQ6IED9 249 aa12.06□□□□□ -0.48
SSR4-201ENST00000320857 GTSF1LQ9H1H1 148 aa12.06□□□□□ -0.48
SSR4-201ENST00000320857 Q6ZUT4 128 aa12.05□□□□□ -0.48
SSR4-201ENST00000320857 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
SSR4-201ENST00000320857 LEPROTO15243 131 aa12.04□□□□□ -0.48
SSR4-201ENST00000320857 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
SSR4-201ENST00000320857 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms