RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
PRPF18-201ENST00000320054 DYNC2H1Q8NCM8 4307 aaKnown RBP9.41□□□□□ -0.9
PRPF18-201ENST00000320054 FCER1GP30273 86 aa9.41□□□□□ -0.9
PRPF18-201ENST00000320054 APLNQ9ULZ1 77 aa9.41□□□□□ -0.9
PRPF18-201ENST00000320054 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
PRPF18-201ENST00000320054 LAGE3Q14657 143 aa9.4□□□□□ -0.9
PRPF18-201ENST00000320054 ORMDL2Q53FV1 153 aa9.4□□□□□ -0.9
PRPF18-201ENST00000320054 LYPD5Q6UWN5 251 aa9.4□□□□□ -0.9
PRPF18-201ENST00000320054 NTM-AS1Q6ZSK4 140 aa9.4□□□□□ -0.9
PRPF18-201ENST00000320054 AP5S1Q9NUS5 200 aa9.4□□□□□ -0.9
PRPF18-201ENST00000320054 CSMD3Q7Z407 3707 aa9.4□□□□□ -0.9
PRPF18-201ENST00000320054 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
PRPF18-201ENST00000320054 SERF1AO75920 110 aa9.39□□□□□ -0.91
PRPF18-201ENST00000320054 AMTP48728 403 aa9.39□□□□□ -0.91
PRPF18-201ENST00000320054 NDUFA6P56556 154 aa9.39□□□□□ -0.91
PRPF18-201ENST00000320054 LINC00310P59036 64 aa9.39□□□□□ -0.91
PRPF18-201ENST00000320054 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
PRPF18-201ENST00000320054 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
PRPF18-201ENST00000320054 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
PRPF18-201ENST00000320054 ESDP10768 282 aa9.38□□□□□ -0.91
PRPF18-201ENST00000320054 G0S2P27469 103 aa9.38□□□□□ -0.91
PRPF18-201ENST00000320054 ESRGQ1W209 222 aa9.38□□□□□ -0.91
PRPF18-201ENST00000320054 LELP1Q5T871 98 aa9.38□□□□□ -0.91
PRPF18-201ENST00000320054 ZFAND6Q6FIF0 208 aa9.38□□□□□ -0.91
PRPF18-201ENST00000320054 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
PRPF18-201ENST00000320054 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
PRPF18-201ENST00000320054 DEFB104AQ8WTQ1 72 aa9.37□□□□□ -0.91
PRPF18-201ENST00000320054 TMEM243Q9BU79 118 aa9.37□□□□□ -0.91
PRPF18-201ENST00000320054 CHCHD7Q9BUK0 85 aa9.37□□□□□ -0.91
PRPF18-201ENST00000320054 H7C423 109 aa9.36□□□□□ -0.91
PRPF18-201ENST00000320054 HSBP1O75506 76 aa9.36□□□□□ -0.91
PRPF18-201ENST00000320054 S100A6P06703 90 aa9.36□□□□□ -0.91
PRPF18-201ENST00000320054 CCL18P55774 89 aa9.36□□□□□ -0.91
PRPF18-201ENST00000320054 LINC01549A6NIU2 74 aa9.35□□□□□ -0.91
PRPF18-201ENST00000320054 NUPR1O60356 82 aa9.35□□□□□ -0.91
PRPF18-201ENST00000320054 TMEM18Q96B42 140 aa9.35□□□□□ -0.91
PRPF18-201ENST00000320054 A0A096LNJ9 63 aa9.34□□□□□ -0.91
PRPF18-201ENST00000320054 TRAV8-6A0A0B4J262 113 aa9.34□□□□□ -0.91
PRPF18-201ENST00000320054 HBDP02042 147 aa9.34□□□□□ -0.91
PRPF18-201ENST00000320054 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
PRPF18-201ENST00000320054 MRPS16Q9Y3D3 137 aaKnown RBP9.34□□□□□ -0.91
PRPF18-201ENST00000320054 PKIAP61925 76 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 SMAGPQ0VAQ4 97 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 CHCHD5Q9BSY4 110 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 TIMM21Q9BVV7 248 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 TMA7Q9Y2S6 64 aaKnown RBP9.33□□□□□ -0.92
PRPF18-201ENST00000320054 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
PRPF18-201ENST00000320054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.32□□□□□ -0.92
PRPF18-201ENST00000320054 IGKV2-29A2NJV5 120 aaPredicted RBP9.32□□□□□ -0.92
PRPF18-201ENST00000320054 UBE2L6O14933 153 aa9.32□□□□□ -0.92
PRPF18-201ENST00000320054 BTF3P20290 206 aaKnown RBP9.32□□□□□ -0.92
PRPF18-201ENST00000320054 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
PRPF18-201ENST00000320054 PYGO1Q9Y3Y4 419 aa9.32□□□□□ -0.92
PRPF18-201ENST00000320054 C5orf52A6NGY3 159 aa9.31□□□□□ -0.92
PRPF18-201ENST00000320054 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
PRPF18-201ENST00000320054 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
PRPF18-201ENST00000320054 PMCHL1Q16048 86 aa9.31□□□□□ -0.92
PRPF18-201ENST00000320054 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
PRPF18-201ENST00000320054 FAM19A2Q8N3H0 131 aa9.31□□□□□ -0.92
PRPF18-201ENST00000320054 PACRGQ96M98 296 aaPredicted RBP9.31□□□□□ -0.92
PRPF18-201ENST00000320054 SPANXA1Q9NS26 97 aa9.31□□□□□ -0.92
PRPF18-201ENST00000320054 CSDC2Q9Y534 153 aaKnown RBP9.31□□□□□ -0.92
PRPF18-201ENST00000320054 STARD9Q9P2P6 4700 aa9.31□□□□□ -0.92
PRPF18-201ENST00000320054 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
PRPF18-201ENST00000320054 NPSP0C0P6 89 aa9.3□□□□□ -0.92
PRPF18-201ENST00000320054 FGF6P10767 208 aa9.3□□□□□ -0.92
PRPF18-201ENST00000320054 SNRPEP62304 92 aaKnown RBP9.3□□□□□ -0.92
PRPF18-201ENST00000320054 GAGE6Q13070 117 aa9.3□□□□□ -0.92
PRPF18-201ENST00000320054 ERASQ7Z444 233 aa9.3□□□□□ -0.92
PRPF18-201ENST00000320054 HIST3H2BBQ8N257 126 aa9.3□□□□□ -0.92
PRPF18-201ENST00000320054 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
PRPF18-201ENST00000320054 IGIPA6NJ69 53 aa9.29□□□□□ -0.92
PRPF18-201ENST00000320054 AMMECR1LQ6DCA0 310 aa9.29□□□□□ -0.92
PRPF18-201ENST00000320054 WFDC10BQ8IUB3 73 aa9.29□□□□□ -0.92
PRPF18-201ENST00000320054 UBE2DNLQ8IWF7 75 aa9.29□□□□□ -0.92
PRPF18-201ENST00000320054 TIMM17AQ99595 171 aa9.29□□□□□ -0.92
PRPF18-201ENST00000320054 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
PRPF18-201ENST00000320054 ATP5LO75964 103 aa9.28□□□□□ -0.92
PRPF18-201ENST00000320054 LINC01556Q5JQF7 62 aa9.28□□□□□ -0.92
PRPF18-201ENST00000320054 TMEM141Q96I45 108 aa9.28□□□□□ -0.92
PRPF18-201ENST00000320054 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
PRPF18-201ENST00000320054 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
PRPF18-201ENST00000320054 PLECQ15149 4684 aaKnown RBP9.28□□□□□ -0.92
PRPF18-201ENST00000320054 A0A087WX48 190 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 SIVA1O15304 175 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 LEPROTL1O95214 131 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 RBX1P62877 108 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 MRPS36P82909 103 aaKnown RBP9.27□□□□□ -0.93
PRPF18-201ENST00000320054 MPV17L2Q567V2 206 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 DGAT2L7PQ6IED9 249 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 OR5A1Q8NGJ0 315 aa9.27□□□□□ -0.93
PRPF18-201ENST00000320054 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.26□□□□□ -0.93
PRPF18-201ENST00000320054 S100A2P29034 98 aa9.26□□□□□ -0.93
PRPF18-201ENST00000320054 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
PRPF18-201ENST00000320054 LGALS9CQ6DKI2 356 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms