RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 COTL1Q14019 142 aa10.65□□□□□ -0.7
PDLIM5-202ENST00000318007 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
PDLIM5-202ENST00000318007 FA2HQ7L5A8 372 aa10.65□□□□□ -0.7
PDLIM5-202ENST00000318007 IGLV2-18A0A075B6J9 118 aa10.65□□□□□ -0.71
PDLIM5-202ENST00000318007 TRBV27A0A0K0K1C4 114 aa10.65□□□□□ -0.71
PDLIM5-202ENST00000318007 NUPR1O60356 82 aa10.65□□□□□ -0.71
PDLIM5-202ENST00000318007 TSHBP01222 138 aa10.65□□□□□ -0.71
PDLIM5-202ENST00000318007 DAZ4Q86SG3 579 aaKnown RBP10.65□□□□□ -0.71
PDLIM5-202ENST00000318007 DAZ3Q9NR90 486 aaKnown RBP10.65□□□□□ -0.71
PDLIM5-202ENST00000318007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-202ENST00000318007 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-202ENST00000318007 ESRGQ1W209 222 aa10.64□□□□□ -0.71
PDLIM5-202ENST00000318007 FAM19A2Q8N3H0 131 aa10.64□□□□□ -0.71
PDLIM5-202ENST00000318007 Q8N8P6 123 aa10.64□□□□□ -0.71
PDLIM5-202ENST00000318007 KLK5Q9Y337 293 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-202ENST00000318007 LINC00614P0C842 121 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 LINC00310P59036 64 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 GTSF1LQ9H1H1 148 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 H3BNG1 76 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 AMTP48728 403 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 LYPD5Q6UWN5 251 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 C15orf53Q8NAA6 179 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 AP5S1Q9NUS5 200 aa10.63□□□□□ -0.71
PDLIM5-202ENST00000318007 RPL39P62891 51 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-202ENST00000318007 Q8N3U1 123 aa10.62□□□□□ -0.71
PDLIM5-202ENST00000318007 APLNQ9ULZ1 77 aa10.62□□□□□ -0.71
PDLIM5-202ENST00000318007 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
PDLIM5-202ENST00000318007 Q0VG73 95 aa10.61□□□□□ -0.71
PDLIM5-202ENST00000318007 CHCHD5Q9BSY4 110 aa10.61□□□□□ -0.71
PDLIM5-202ENST00000318007 LAGE3Q14657 143 aa10.61□□□□□ -0.71
PDLIM5-202ENST00000318007 HSBP1O75506 76 aa10.6□□□□□ -0.71
PDLIM5-202ENST00000318007 GAGE6Q13070 117 aa10.6□□□□□ -0.71
PDLIM5-202ENST00000318007 CASC10Q5T4H9 136 aa10.6□□□□□ -0.71
PDLIM5-202ENST00000318007 TRBV25-1A0A075B6N4 114 aa10.59□□□□□ -0.71
PDLIM5-202ENST00000318007 PRSS47A8MTI9 375 aa10.59□□□□□ -0.71
PDLIM5-202ENST00000318007 TMEM262E9PQX1 116 aa10.59□□□□□ -0.71
PDLIM5-202ENST00000318007 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
PDLIM5-202ENST00000318007 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
PDLIM5-202ENST00000318007 LINC00588Q9Y4M8 146 aa10.59□□□□□ -0.71
PDLIM5-202ENST00000318007 C12orf57Q99622 126 aa10.59□□□□□ -0.71
PDLIM5-202ENST00000318007 IGHV1-24A0A0C4DH33 117 aa10.58□□□□□ -0.72
PDLIM5-202ENST00000318007 UBE2L6O14933 153 aa10.58□□□□□ -0.72
PDLIM5-202ENST00000318007 UBE2DNLQ8IWF7 75 aa10.58□□□□□ -0.72
PDLIM5-202ENST00000318007 DNAH1Q9P2D7 4330 aa10.58□□□□□ -0.72
PDLIM5-202ENST00000318007 CCL18P55774 89 aa10.57□□□□□ -0.72
PDLIM5-202ENST00000318007 SNRPEP62304 92 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-202ENST00000318007 RPL32P62910 135 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-202ENST00000318007 Q8N976 141 aa10.57□□□□□ -0.72
PDLIM5-202ENST00000318007 TMEM243Q9BU79 118 aa10.57□□□□□ -0.72
PDLIM5-202ENST00000318007 RNASE13Q5GAN3 156 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-202ENST00000318007 SH2D6Q7Z4S9 175 aa10.57□□□□□ -0.72
PDLIM5-202ENST00000318007 A0A096LNJ9 63 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 FABP4P15090 132 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 ORMDL2Q53FV1 153 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 OPRPNQ99935 248 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 MPV17L2Q567V2 206 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 LELP1Q5T871 98 aa10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-202ENST00000318007 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
PDLIM5-202ENST00000318007 ESDP10768 282 aa10.54□□□□□ -0.72
PDLIM5-202ENST00000318007 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
PDLIM5-202ENST00000318007 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
PDLIM5-202ENST00000318007 H0Y8G0 127 aa10.54□□□□□ -0.72
PDLIM5-202ENST00000318007 AMMECR1LQ6DCA0 310 aa10.54□□□□□ -0.72
PDLIM5-202ENST00000318007 LINC00173Q6ZV60 143 aa10.54□□□□□ -0.72
PDLIM5-202ENST00000318007 CYSLTR1Q9Y271 337 aa10.54□□□□□ -0.72
PDLIM5-202ENST00000318007 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
PDLIM5-202ENST00000318007 HBDP02042 147 aa10.53□□□□□ -0.72
PDLIM5-202ENST00000318007 FGF6P10767 208 aa10.53□□□□□ -0.72
PDLIM5-202ENST00000318007 ZC2HC1BQ5TFG8 222 aa10.53□□□□□ -0.72
PDLIM5-202ENST00000318007 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.72
PDLIM5-202ENST00000318007 A0A087WX48 190 aa10.52□□□□□ -0.72
PDLIM5-202ENST00000318007 AKR1D1P51857 326 aa10.52□□□□□ -0.72
PDLIM5-202ENST00000318007 KMT2AQ03164 3969 aa10.52□□□□□ -0.73
PDLIM5-202ENST00000318007 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
PDLIM5-202ENST00000318007 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
PDLIM5-202ENST00000318007 UBE2D4Q9Y2X8 147 aa10.52□□□□□ -0.73
PDLIM5-202ENST00000318007 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
PDLIM5-202ENST00000318007 LY6G6CO95867 125 aa10.51□□□□□ -0.73
PDLIM5-202ENST00000318007 DGAT2L7PQ6IED9 249 aa10.51□□□□□ -0.73
PDLIM5-202ENST00000318007 SCGB3A1Q96QR1 104 aa10.51□□□□□ -0.73
PDLIM5-202ENST00000318007 K7EMI3 77 aa10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 COA6Q5JTJ3 125 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 TOMM6Q96B49 74 aa10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 S100A2P29034 98 aa10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 RBX1P62877 108 aa10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 Q6ZUT4 128 aa10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 HIST3H2BBQ8N257 126 aa10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 MRPS16Q9Y3D3 137 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-202ENST00000318007 LEPROTL1O95214 131 aa10.49□□□□□ -0.73
PDLIM5-202ENST00000318007 ANGP03950 147 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-202ENST00000318007 TMEM18Q96B42 140 aa10.49□□□□□ -0.73
PDLIM5-202ENST00000318007 Q9H8V8 135 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms