RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CMC4P56277 68 aaPredicted RBP10.89□□□□□ -0.67
CHFR-202ENST00000315585 FHL3Q13643 280 aa10.89□□□□□ -0.67
CHFR-202ENST00000315585 SPANXA1Q9NS26 97 aa10.89□□□□□ -0.67
CHFR-202ENST00000315585 SMR3AQ99954 134 aa10.89□□□□□ -0.67
CHFR-202ENST00000315585 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
CHFR-202ENST00000315585 AMELXQ99217 191 aa10.88□□□□□ -0.67
CHFR-202ENST00000315585 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
CHFR-202ENST00000315585 MXRA5Q9NR99 2828 aa10.88□□□□□ -0.67
CHFR-202ENST00000315585 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 H3BMG7 143 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 BEAN1Q3B7T3 259 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 A0A1W2PRX2 142 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
CHFR-202ENST00000315585 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
CHFR-202ENST00000315585 IGHV3-53P01767 116 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 IGHV3-30P01768 117 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
CHFR-202ENST00000315585 IGHV3-30-5P0DP03 117 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
CHFR-202ENST00000315585 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
CHFR-202ENST00000315585 TRBV20-1A0A075B6N2 111 aa10.86□□□□□ -0.67
CHFR-202ENST00000315585 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
CHFR-202ENST00000315585 COTL1Q14019 142 aa10.86□□□□□ -0.67
CHFR-202ENST00000315585 NDUFA11Q86Y39 141 aa10.86□□□□□ -0.67
CHFR-202ENST00000315585 STHQ8IWL8 128 aa10.86□□□□□ -0.67
CHFR-202ENST00000315585 NBPF19A0A087WUL8 3843 aa10.86□□□□□ -0.67
CHFR-202ENST00000315585 IGHV3-73A0A0B4J1V6 119 aa10.85□□□□□ -0.67
CHFR-202ENST00000315585 OPRPNQ99935 248 aaPredicted RBP10.85□□□□□ -0.67
CHFR-202ENST00000315585 TLN2Q9Y4G6 2542 aa10.85□□□□□ -0.67
CHFR-202ENST00000315585 APOMO95445 188 aa10.85□□□□□ -0.67
CHFR-202ENST00000315585 C11orf72Q8NBR9 251 aa10.85□□□□□ -0.67
CHFR-202ENST00000315585 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.84□□□□□ -0.67
CHFR-202ENST00000315585 A0A0J9YXV3 536 aa10.84□□□□□ -0.67
CHFR-202ENST00000315585 RS1O15537 224 aa10.84□□□□□ -0.67
CHFR-202ENST00000315585 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
CHFR-202ENST00000315585 TIMM21Q9BVV7 248 aa10.84□□□□□ -0.67
CHFR-202ENST00000315585 PRO1854Q9UHT4 67 aa10.84□□□□□ -0.67
CHFR-202ENST00000315585 SORL1Q92673 2214 aa10.84□□□□□ -0.67
CHFR-202ENST00000315585 C10orf126Q8N4M7 172 aa10.84□□□□□ -0.67
CHFR-202ENST00000315585 SONP18583 2426 aaKnown RBP10.83□□□□□ -0.68
CHFR-202ENST00000315585 LOC107984156A0A0G2JMH3 177 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 TEX48A0A1B0GUV7 120 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 TINCRA0A1B0GVN0 87 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 TSPAN13O95857 204 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 PROK1P58294 105 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 SMAGPQ0VAQ4 97 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 ARL17AQ8IVW1 177 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 UBE2D3P61077 147 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 UBE2D2P62837 147 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 WFDC2Q14508 124 aa10.83□□□□□ -0.68
CHFR-202ENST00000315585 ITPR2Q14571 2701 aa10.82□□□□□ -0.68
CHFR-202ENST00000315585 GCN1Q92616 2671 aaKnown RBP10.82□□□□□ -0.68
CHFR-202ENST00000315585 CFC1BP0CG36 223 aa10.82□□□□□ -0.68
CHFR-202ENST00000315585 CFC1P0CG37 223 aa10.82□□□□□ -0.68
CHFR-202ENST00000315585 IGHV1-58A0A0C4DH39 117 aa10.81□□□□□ -0.68
CHFR-202ENST00000315585 CHCHD7Q9BUK0 85 aa10.81□□□□□ -0.68
CHFR-202ENST00000315585 UBE2D4Q9Y2X8 147 aa10.81□□□□□ -0.68
CHFR-202ENST00000315585 A0A0B4J2C4 111 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 IGHV3-30-3P0DP02 117 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 ATP6V0E2Q8NHE4 81 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 FASNP49327 2511 aaKnown RBP10.8□□□□□ -0.68
CHFR-202ENST00000315585 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 INAFM1C9JVW0 142 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 C21orf62-AS1Q17RA5 79 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 DGAT2L7PQ6IED9 249 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 GEMIN7Q9H840 131 aaKnown RBP10.8□□□□□ -0.68
CHFR-202ENST00000315585 PRO0461Q9UI25 63 aa10.8□□□□□ -0.68
CHFR-202ENST00000315585 HIVEP2P31629 2446 aa10.79□□□□□ -0.68
CHFR-202ENST00000315585 PSMB2P49721 201 aa10.79□□□□□ -0.68
CHFR-202ENST00000315585 ODF3L2Q3SX64 289 aa10.79□□□□□ -0.68
CHFR-202ENST00000315585 HIST2H2BDQ6DRA6 164 aa10.79□□□□□ -0.68
CHFR-202ENST00000315585 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
CHFR-202ENST00000315585 SCGB1C2P0DMR2 95 aa10.79□□□□□ -0.68
CHFR-202ENST00000315585 ETDBQ3ZM63 59 aa10.79□□□□□ -0.68
CHFR-202ENST00000315585 ZNF469Q96JG9 3925 aaPredicted RBP10.79□□□□□ -0.68
CHFR-202ENST00000315585 AZU1P20160 251 aa10.78□□□□□ -0.68
CHFR-202ENST00000315585 MYO9AB2RTY4 2548 aa10.78□□□□□ -0.68
CHFR-202ENST00000315585 CIDEAO60543 219 aa10.78□□□□□ -0.68
CHFR-202ENST00000315585 RPL36AP83881 106 aaKnown RBP10.78□□□□□ -0.68
CHFR-202ENST00000315585 RPL36ALQ969Q0 106 aaKnown RBP10.78□□□□□ -0.68
CHFR-202ENST00000315585 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
CHFR-202ENST00000315585 ERG28Q9UKR5 140 aa10.78□□□□□ -0.68
CHFR-202ENST00000315585 ACANP16112 2415 aa10.78□□□□□ -0.68
CHFR-202ENST00000315585 A0A0J9YXY3 114 aa10.77□□□□□ -0.68
CHFR-202ENST00000315585 A4D1N5 150 aa10.77□□□□□ -0.68
CHFR-202ENST00000315585 TIRAPP58753 221 aa10.77□□□□□ -0.68
CHFR-202ENST00000315585 TMEM263Q8WUH6 116 aaKnown RBP10.77□□□□□ -0.68
CHFR-202ENST00000315585 IGHV3-64A0A075B6Q5 118 aa10.77□□□□□ -0.69
CHFR-202ENST00000315585 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
CHFR-202ENST00000315585 Q6ZSN1 163 aa10.77□□□□□ -0.69
CHFR-202ENST00000315585 DAZ4Q86SG3 579 aaKnown RBP10.77□□□□□ -0.69
CHFR-202ENST00000315585 VSIG2Q96IQ7 327 aa10.77□□□□□ -0.69
CHFR-202ENST00000315585 DAZ3Q9NR90 486 aaKnown RBP10.77□□□□□ -0.69
CHFR-202ENST00000315585 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
CHFR-202ENST00000315585 TRGV1A0A0A0MS02 117 aa10.76□□□□□ -0.69
CHFR-202ENST00000315585 PRM2P04554 102 aa10.76□□□□□ -0.69
CHFR-202ENST00000315585 MUSTN1Q8IVN3 82 aa10.76□□□□□ -0.69
CHFR-202ENST00000315585 IL17DQ8TAD2 202 aa10.76□□□□□ -0.69
CHFR-202ENST00000315585 ADARB2-AS1A8MUL3 147 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms