RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 GAFA1Q96PS6 74 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 HINT2Q9BX68 163 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 CYSTM1Q9H1C7 97 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 KIF25-AS1Q9Y6Z4 181 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 HSPG2P98160 4391 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 A0A096LPE4 126 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 TRAV8-1A0A0A6YYK1 113 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 A0A1W2PPZ6 126 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 SDHAF1A6NFY7 115 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 BUB3O43684 328 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 ACYP1P07311 99 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 RPL7P18124 248 aaKnown RBP3.07□□□□□ -1.92
POLR2B-201ENST00000314595 LINC00315P59091 139 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 HOXA4Q00056 320 aaPredicted RBP3.07□□□□□ -1.92
POLR2B-201ENST00000314595 Q6ZS46 218 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 VMO1Q7Z5L0 202 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 DPH3Q96FX2 82 aa3.07□□□□□ -1.92
POLR2B-201ENST00000314595 ZNF256Q9Y2P7 627 aaPredicted RBP3.07□□□□□ -1.92
POLR2B-201ENST00000314595 IGHV4OR15-8A0A075B7B6 117 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 A0A087WW49 117 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 IGHV3-43A0A0B4J1X8 118 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 J3KT08 172 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 TFF1P04155 84 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 IGHV3-43DP0DP04 118 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 ORM2P19652 201 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 PSMB8P28062 276 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 LYPD5Q6UWN5 251 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 C2orf82Q6UX34 121 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 PRO1854Q9UHT4 67 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 IGKV3D-20A0A0C4DH25 116 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 ODF3BA8MYP8 253 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 ZNF22P17026 224 aaPredicted RBP3.06□□□□□ -1.92
POLR2B-201ENST00000314595 EXOC3-AS1Q8N2X6 119 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 FAM216BQ8N7L0 139 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 MRPL53Q96EL3 112 aaKnown RBP3.06□□□□□ -1.92
POLR2B-201ENST00000314595 C11orf21Q9P2W6 132 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 A4D1N5 150 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 SMKR1H3BMG3 65 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 K7EIM0 57 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 LST1O00453 97 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 COX7CP15954 63 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 SUB1P53999 127 aaKnown RBP eCLIP3.06□□□□□ -1.927e-11■■■■■ 40.7
POLR2B-201ENST00000314595 ZNF876PQ49A33 203 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 LINC01620Q4KN68 170 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 FAM19A3Q7Z5A8 133 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 HIST1H4GQ99525 98 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 PRADC1Q9BSG0 188 aa3.06□□□□□ -1.92
POLR2B-201ENST00000314595 NCBP2LA6PVI3 153 aaKnown RBP3.05□□□□□ -1.92
POLR2B-201ENST00000314595 C9JAW5 83 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 HIGD1AQ9Y241 93 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 IGHV3OR16-10A0A075B7F0 116 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 PF4P02776 101 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 SCGB1C2P0DMR2 95 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 ARL3P36405 182 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 PSMB2P49721 201 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 FXYD7P58549 80 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 ZNF826PQ6ZT77 177 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 GOLT1AQ6ZVE7 132 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 ASCL2Q99929 193 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 CHCHD5Q9BSY4 110 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 MSRB1Q9NZV6 116 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 PEMTQ9UBM1 199 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 TEX49A0A1B0GTD5 131 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 NDUFC2-KCTD14E9PQ53 114 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 SPRY3O43610 288 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 SNCGO76070 127 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 CNIH1O95406 144 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 CNTFRP26992 372 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 CKS2P33552 79 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 SAA4P35542 130 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 MZT1Q08AG7 82 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 NSUN5P1Q3KNT7 163 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 CEMP1Q6PRD7 247 aaPredicted RBP3.05□□□□□ -1.92
POLR2B-201ENST00000314595 PRNTQ86SH4 94 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 TRPT1Q86TN4 253 aaKnown RBP3.05□□□□□ -1.92
POLR2B-201ENST00000314595 DAZAP1Q96EP5 407 aaKnown RBP3.05□□□□□ -1.92
POLR2B-201ENST00000314595 METTL26Q96S19 204 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 TIMM17AQ99595 171 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 SMIM2Q9BVW6 85 aa3.05□□□□□ -1.92
POLR2B-201ENST00000314595 TRAV26-2A0A0B4J265 109 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 LOC107984640A0A0U1RRK4 108 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 TIMM17BO60830 172 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 TMEM258P61165 79 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 HERVK_113P63121 156 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 ERHP84090 104 aaKnown RBP3.04□□□□□ -1.92
POLR2B-201ENST00000314595 FAM222AQ5U5X8 452 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 ENY2Q9NPA8 101 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 LOC389332A0A1B0GUA5 103 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 H3BUX3 64 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 POLR2KP53803 58 aaKnown RBP3.04□□□□□ -1.92
POLR2B-201ENST00000314595 ATXN8Q156A1 80 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 MINOS1Q5TGZ0 78 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 C14orf178Q8N769 122 aaPredicted RBP3.04□□□□□ -1.92
POLR2B-201ENST00000314595 RNF5Q99942 180 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 SLC50A1Q9BRV3 221 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 MINOS1-NBL1R4GNA1 71 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 NOTCH3Q9UM47 2321 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 STAB2Q8WWQ8 2551 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 TRBV6-5A0A0K0K1A5 114 aa3.04□□□□□ -1.92
POLR2B-201ENST00000314595 NUPR2A6NF83 97 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms