RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CKS1BP61024 79 aa9.09□□□□□ -0.95
RNF4-201ENST00000314289 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
RNF4-201ENST00000314289 MORN3Q6PF18 240 aaPredicted RBP9.09□□□□□ -0.95
RNF4-201ENST00000314289 C2orf66Q6UXQ4 117 aa9.09□□□□□ -0.95
RNF4-201ENST00000314289 LINC01587Q99440 93 aa9.09□□□□□ -0.95
RNF4-201ENST00000314289 Q9UF83 564 aa9.09□□□□□ -0.95
RNF4-201ENST00000314289 SDHAF1A6NFY7 115 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 LINC01549A6NIU2 74 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 ZNF815PA8K554 130 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 PSMB2P49721 201 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 EMP1P54849 157 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 SRSF9Q13242 221 aaKnown RBP eCLIP9.08□□□□□ -0.96
RNF4-201ENST00000314289 FHL3Q13643 280 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 PRADC1Q9BSG0 188 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 SYT8Q8NBV8 401 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 PLEKHB2Q96CS7 222 aa9.08□□□□□ -0.96
RNF4-201ENST00000314289 HILS1P60008 231 aa9.07□□□□□ -0.96
RNF4-201ENST00000314289 ORMDL2Q53FV1 153 aa9.07□□□□□ -0.96
RNF4-201ENST00000314289 PTH2Q96A98 100 aa9.07□□□□□ -0.96
RNF4-201ENST00000314289 TRRAPQ9Y4A5 3859 aa9.07□□□□□ -0.96
RNF4-201ENST00000314289 INAFM1C9JVW0 142 aa9.07□□□□□ -0.96
RNF4-201ENST00000314289 A6NJY4 79 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 ZFP2Q6ZN57 461 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 TP53TG1Q9Y2A0 90 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 TEP1Q99973 2627 aaKnown RBP9.06□□□□□ -0.96
RNF4-201ENST00000314289 TRGV11A0A075B6L2 103 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 M0QY20 66 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 STHQ8IWL8 128 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 BAALCQ8WXS3 180 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 TRAV12-1A0A0B4J245 112 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
RNF4-201ENST00000314289 FOXI1Q12951 378 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 NEXN-AS1Q8NBZ9 246 aa9.06□□□□□ -0.96
RNF4-201ENST00000314289 PRSS29PA6NIE9 313 aa9.05□□□□□ -0.96
RNF4-201ENST00000314289 POLR2KP53803 58 aaKnown RBP9.05□□□□□ -0.96
RNF4-201ENST00000314289 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
RNF4-201ENST00000314289 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
RNF4-201ENST00000314289 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
RNF4-201ENST00000314289 NFE4Q86UQ8 179 aa9.05□□□□□ -0.96
RNF4-201ENST00000314289 CFAP126Q5VTH2 177 aa9.04□□□□□ -0.96
RNF4-201ENST00000314289 Q6ZSN1 163 aa9.04□□□□□ -0.96
RNF4-201ENST00000314289 POM121L12Q8N7R1 296 aa9.04□□□□□ -0.96
RNF4-201ENST00000314289 KIR2DL4Q99706 377 aa9.04□□□□□ -0.96
RNF4-201ENST00000314289 TSPAN13O95857 204 aa9.04□□□□□ -0.96
RNF4-201ENST00000314289 F8P00451 2351 aa9.04□□□□□ -0.96
RNF4-201ENST00000314289 TRAV26-1A0A087WT03 109 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 ADARB2-AS1A8MUL3 147 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 RPL35AP18077 110 aaKnown RBP9.03□□□□□ -0.96
RNF4-201ENST00000314289 C16orf95Q9H693 158 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 VCYO14598 125 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 SPINK8P0C7L1 97 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 PPP1R17O96001 155 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 TSHBP01222 138 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 INSP01308 110 aa9.03□□□□□ -0.96
RNF4-201ENST00000314289 GEMIN7Q9H840 131 aaKnown RBP9.03□□□□□ -0.96
RNF4-201ENST00000314289 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.97
RNF4-201ENST00000314289 CDIP1Q9H305 208 aa9.02□□□□□ -0.97
RNF4-201ENST00000314289 A8MTW9 85 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 C1orf158Q8N1D5 194 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 SPATA3Q8NHX4 192 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 C11orf72Q8NBR9 251 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 IGHV3-38A0A0C4DH36 116 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 C11orf86A6NJI1 115 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 M0R2P5 195 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 ZNF415Q09FC8 603 aa9.01□□□□□ -0.97
RNF4-201ENST00000314289 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
RNF4-201ENST00000314289 XGP55808 180 aa9□□□□□ -0.97
RNF4-201ENST00000314289 TRPT1Q86TN4 253 aaKnown RBP9□□□□□ -0.97
RNF4-201ENST00000314289 UBE2D1P51668 147 aa9□□□□□ -0.97
RNF4-201ENST00000314289 CEMP1Q6PRD7 247 aaPredicted RBP9□□□□□ -0.97
RNF4-201ENST00000314289 TCL1BO95988 128 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 SCGB1C2P0DMR2 95 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 CRYBA4P53673 196 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 TMEM170BQ5T4T1 132 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 TRGV1A0A0A0MS02 117 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 RNASE13Q5GAN3 156 aaKnown RBP8.99□□□□□ -0.97
RNF4-201ENST00000314289 IGIPA6NJ69 53 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 Q6ZUT4 128 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 NDUFA11Q86Y39 141 aa8.99□□□□□ -0.97
RNF4-201ENST00000314289 TRAV25A0A0B4J276 109 aa8.98□□□□□ -0.97
RNF4-201ENST00000314289 PF4P02776 101 aa8.98□□□□□ -0.97
RNF4-201ENST00000314289 CARD19Q96LW7 228 aa8.98□□□□□ -0.97
RNF4-201ENST00000314289 TRBV6-5A0A0K0K1A5 114 aa8.98□□□□□ -0.97
RNF4-201ENST00000314289 H7C2G1 150 aa8.98□□□□□ -0.97
RNF4-201ENST00000314289 HERVK_113P61574 105 aa8.98□□□□□ -0.97
RNF4-201ENST00000314289 ATP6V0E2Q8NHE4 81 aa8.98□□□□□ -0.97
RNF4-201ENST00000314289 A0A0J9YY99 117 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 IGLV1-51P01701 117 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 UBE2D3P61077 147 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 UBE2D2P62837 147 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 GIG44P09565 113 aaPredicted RBP8.97□□□□□ -0.97
RNF4-201ENST00000314289 Q6ZTI0 123 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 PPDPFLQ8WWR9 84 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
RNF4-201ENST00000314289 IGLV4-69A0A075B6H9 119 aa8.96□□□□□ -0.97
RNF4-201ENST00000314289 I3L3M4 83 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1004.2 ms