RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 MIFP14174 115 aa11.88□□□□□ -0.51
CLCF1-201ENST00000312438 COTL1Q14019 142 aa11.88□□□□□ -0.51
CLCF1-201ENST00000312438 PRSS29PA6NIE9 313 aa11.88□□□□□ -0.51
CLCF1-201ENST00000312438 F8VRH5 84 aa11.88□□□□□ -0.51
CLCF1-201ENST00000312438 FHL2Q14192 279 aa11.88□□□□□ -0.51
CLCF1-201ENST00000312438 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
CLCF1-201ENST00000312438 STPG4Q8N801 248 aa11.88□□□□□ -0.51
CLCF1-201ENST00000312438 PHLDA1Q8WV24 401 aaPredicted RBP11.88□□□□□ -0.51
CLCF1-201ENST00000312438 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
CLCF1-201ENST00000312438 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
CLCF1-201ENST00000312438 CHTOPQ9Y3Y2 248 aaKnown RBP11.88□□□□□ -0.51
CLCF1-201ENST00000312438 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
CLCF1-201ENST00000312438 PLNP26678 52 aa11.87□□□□□ -0.51
CLCF1-201ENST00000312438 PMVKQ15126 192 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 PYGO1Q9Y3Y4 419 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 NACAE9PAV3 2078 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 IGHV4-28A0A0C4DH34 117 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 UBE2D3P61077 147 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 UBE2D2P62837 147 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 FAM222AQ5U5X8 452 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 PRADC1Q9BSG0 188 aa11.86□□□□□ -0.51
CLCF1-201ENST00000312438 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
CLCF1-201ENST00000312438 G3V4G9 280 aa11.85□□□□□ -0.51
CLCF1-201ENST00000312438 GAGE1Q13065 139 aa11.85□□□□□ -0.51
CLCF1-201ENST00000312438 GAGE4Q13068 117 aa11.85□□□□□ -0.51
CLCF1-201ENST00000312438 GAGE5Q13069 117 aa11.85□□□□□ -0.51
CLCF1-201ENST00000312438 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
CLCF1-201ENST00000312438 CST9LQ9H4G1 147 aa11.85□□□□□ -0.51
CLCF1-201ENST00000312438 ANKRD39Q53RE8 183 aa11.84□□□□□ -0.51
CLCF1-201ENST00000312438 Q8NAQ8 132 aa11.84□□□□□ -0.51
CLCF1-201ENST00000312438 NPSP0C0P6 89 aa11.83□□□□□ -0.51
CLCF1-201ENST00000312438 PAPPA-AS1Q5QFB9 102 aa11.83□□□□□ -0.51
CLCF1-201ENST00000312438 SLC25A34Q6PIV7 304 aa11.83□□□□□ -0.51
CLCF1-201ENST00000312438 COX8AP10176 69 aa11.83□□□□□ -0.52
CLCF1-201ENST00000312438 ZC2HC1BQ5TFG8 222 aa11.83□□□□□ -0.52
CLCF1-201ENST00000312438 SAMD5Q5TGI4 173 aa11.83□□□□□ -0.52
CLCF1-201ENST00000312438 DEFB4AO15263 64 aa11.82□□□□□ -0.52
CLCF1-201ENST00000312438 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
CLCF1-201ENST00000312438 CRYBA4P53673 196 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 OPRPNQ99935 248 aaPredicted RBP11.81□□□□□ -0.52
CLCF1-201ENST00000312438 GTSF1LQ9H1H1 148 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 VCX2Q9H322 139 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 SPANXA1Q9NS26 97 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 MAST4O15021 2626 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 IGLV4-3A0A075B6K6 122 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 SPART-AS1P0CW21 52 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 STAB1Q9NY15 2570 aa11.81□□□□□ -0.52
CLCF1-201ENST00000312438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
CLCF1-201ENST00000312438 LOC100131303A0A0U1RQF7 123 aa11.8□□□□□ -0.52
CLCF1-201ENST00000312438 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
CLCF1-201ENST00000312438 CTAG1AP78358 180 aa11.8□□□□□ -0.52
CLCF1-201ENST00000312438 MRPS16Q9Y3D3 137 aaKnown RBP11.8□□□□□ -0.52
CLCF1-201ENST00000312438 DAD1P61803 113 aa11.79□□□□□ -0.52
CLCF1-201ENST00000312438 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
CLCF1-201ENST00000312438 MRPL52Q86TS9 123 aaKnown RBP11.79□□□□□ -0.52
CLCF1-201ENST00000312438 PRO0255Q9UI72 69 aa11.79□□□□□ -0.52
CLCF1-201ENST00000312438 TIMM21Q9BVV7 248 aa11.79□□□□□ -0.52
CLCF1-201ENST00000312438 IGLV4-69A0A075B6H9 119 aa11.78□□□□□ -0.52
CLCF1-201ENST00000312438 M0R143 59 aa11.78□□□□□ -0.52
CLCF1-201ENST00000312438 NMUP48645 174 aa11.78□□□□□ -0.52
CLCF1-201ENST00000312438 TCTAP57738 103 aa11.78□□□□□ -0.52
CLCF1-201ENST00000312438 AMELXQ99217 191 aa11.78□□□□□ -0.52
CLCF1-201ENST00000312438 CEMP1Q6PRD7 247 aaPredicted RBP11.77□□□□□ -0.52
CLCF1-201ENST00000312438 BOD1L2Q8IYS8 172 aa11.77□□□□□ -0.52
CLCF1-201ENST00000312438 FAM104AQ969W3 186 aa11.77□□□□□ -0.52
CLCF1-201ENST00000312438 DLEU1O43261 78 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 FGF6P10767 208 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 SMAGPQ0VAQ4 97 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 CELA1Q9UNI1 258 aa11.76□□□□□ -0.53
CLCF1-201ENST00000312438 IGKV2D-26A0A0A0MRZ7 120 aa11.75□□□□□ -0.53
CLCF1-201ENST00000312438 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
CLCF1-201ENST00000312438 ATP5G1P05496 136 aa11.75□□□□□ -0.53
CLCF1-201ENST00000312438 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
CLCF1-201ENST00000312438 TMEM97Q5BJF2 176 aa11.75□□□□□ -0.53
CLCF1-201ENST00000312438 NFE4Q86UQ8 179 aa11.75□□□□□ -0.53
CLCF1-201ENST00000312438 MDFIQ99750 246 aa11.75□□□□□ -0.53
CLCF1-201ENST00000312438 SNHG12Q9BXW3 62 aa11.75□□□□□ -0.53
CLCF1-201ENST00000312438 CSDC2Q9Y534 153 aaKnown RBP11.75□□□□□ -0.53
CLCF1-201ENST00000312438 PAX4O43316 350 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 GYPEP15421 78 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 LBHQ53QV2 105 aaPredicted RBP11.74□□□□□ -0.53
CLCF1-201ENST00000312438 PCP2Q8IVA1 136 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 SBSPONQ8IVN8 264 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 TP73-AS1Q9UF72 201 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 TRBV25-1A0A075B6N4 114 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 H7C423 109 aa11.74□□□□□ -0.53
CLCF1-201ENST00000312438 SIVA1O15304 175 aa11.73□□□□□ -0.53
CLCF1-201ENST00000312438 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
CLCF1-201ENST00000312438 TRBV6-8A0A0A6YYG3 113 aa11.72□□□□□ -0.53
CLCF1-201ENST00000312438 E9PLD3 99 aa11.72□□□□□ -0.53
CLCF1-201ENST00000312438 UBE2L6O14933 153 aa11.72□□□□□ -0.53
CLCF1-201ENST00000312438 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms