RNA–Protein interactions for RNA: ENST00000311308.6

TTC9B-201, Transcript of tetratricopeptide repeat domain 9B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9B, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9B-201ENST00000311308 CNFNQ9BYD5 112 aa13.11□□□□□ -0.31
TTC9B-201ENST00000311308 AMTP48728 403 aa13.1□□□□□ -0.31
TTC9B-201ENST00000311308 IGLV10-54A0A075B6I4 117 aa13.09□□□□□ -0.31
TTC9B-201ENST00000311308 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
TTC9B-201ENST00000311308 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
TTC9B-201ENST00000311308 C20orf203Q8NBC4 194 aa13.09□□□□□ -0.31
TTC9B-201ENST00000311308 RNASE7Q9H1E1 156 aaKnown RBP13.09□□□□□ -0.31
TTC9B-201ENST00000311308 KRTAP26-1Q6PEX3 210 aa13.08□□□□□ -0.32
TTC9B-201ENST00000311308 C9orf163Q8N9P6 203 aa13.08□□□□□ -0.32
TTC9B-201ENST00000311308 OCC1Q8TAD7 63 aa13.08□□□□□ -0.32
TTC9B-201ENST00000311308 KRTAP29-1A8MX34 341 aaPredicted RBP13.07□□□□□ -0.32
TTC9B-201ENST00000311308 TMEM250H0YL14 139 aa13.07□□□□□ -0.32
TTC9B-201ENST00000311308 K7EN84 100 aa13.07□□□□□ -0.32
TTC9B-201ENST00000311308 AP5S1Q9NUS5 200 aa13.07□□□□□ -0.32
TTC9B-201ENST00000311308 IGLV4-60A0A075B6I1 120 aa13.06□□□□□ -0.32
TTC9B-201ENST00000311308 hDV102S1A0JD36 115 aa13.05□□□□□ -0.32
TTC9B-201ENST00000311308 GATCO43716 136 aaKnown RBP13.05□□□□□ -0.32
TTC9B-201ENST00000311308 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
TTC9B-201ENST00000311308 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
TTC9B-201ENST00000311308 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
TTC9B-201ENST00000311308 A8MWL6 223 aa13.03□□□□□ -0.32
TTC9B-201ENST00000311308 NCR2O95944 276 aa13.03□□□□□ -0.32
TTC9B-201ENST00000311308 CNBPP62633 177 aaKnown RBP13.03□□□□□ -0.32
TTC9B-201ENST00000311308 LYPD6BQ8NI32 183 aa13.03□□□□□ -0.32
TTC9B-201ENST00000311308 BORCS7Q96B45 105 aa13.03□□□□□ -0.32
TTC9B-201ENST00000311308 CEBPGP53567 150 aa13.02□□□□□ -0.33
TTC9B-201ENST00000311308 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
TTC9B-201ENST00000311308 AMMECR1LQ6DCA0 310 aa13.02□□□□□ -0.33
TTC9B-201ENST00000311308 FAM231DQ6ZW35 169 aa13.02□□□□□ -0.33
TTC9B-201ENST00000311308 GTSF1Q8WW33 167 aa13.02□□□□□ -0.33
TTC9B-201ENST00000311308 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
TTC9B-201ENST00000311308 GFRA4Q9GZZ7 299 aa13.01□□□□□ -0.33
TTC9B-201ENST00000311308 H7C423 109 aa13□□□□□ -0.33
TTC9B-201ENST00000311308 APCSP02743 223 aa13□□□□□ -0.33
TTC9B-201ENST00000311308 CT83Q5H943 113 aa13□□□□□ -0.33
TTC9B-201ENST00000311308 SDIM1Q6ZPB5 146 aa13□□□□□ -0.33
TTC9B-201ENST00000311308 IGHV3-64A0A075B6Q5 118 aa12.99□□□□□ -0.33
TTC9B-201ENST00000311308 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
TTC9B-201ENST00000311308 RPL39LQ96EH5 51 aaKnown RBP12.99□□□□□ -0.33
TTC9B-201ENST00000311308 EIF5A2Q9GZV4 153 aaKnown RBP12.99□□□□□ -0.33
TTC9B-201ENST00000311308 IGKV3OR2-268A0A0C4DH90 116 aa12.98□□□□□ -0.33
TTC9B-201ENST00000311308 SDHAF1A6NFY7 115 aa12.98□□□□□ -0.33
TTC9B-201ENST00000311308 OXTP01178 125 aa12.98□□□□□ -0.33
TTC9B-201ENST00000311308 KRTAP10-4P60372 401 aaPredicted RBP12.98□□□□□ -0.33
TTC9B-201ENST00000311308 DPH3Q96FX2 82 aa12.98□□□□□ -0.33
TTC9B-201ENST00000311308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.98□□□□□ -0.33
TTC9B-201ENST00000311308 GAGE12HA6NDE8 117 aa12.97□□□□□ -0.33
TTC9B-201ENST00000311308 FOXA3P55318 350 aaPredicted RBP12.97□□□□□ -0.33
TTC9B-201ENST00000311308 I3L3M4 83 aa12.96□□□□□ -0.33
TTC9B-201ENST00000311308 NDUFS6O75380 124 aaKnown RBP12.96□□□□□ -0.33
TTC9B-201ENST00000311308 PMCHP20382 165 aa12.96□□□□□ -0.33
TTC9B-201ENST00000311308 IFITM2Q01629 132 aa12.96□□□□□ -0.33
TTC9B-201ENST00000311308 BTF3L4Q96K17 158 aa12.96□□□□□ -0.33
TTC9B-201ENST00000311308 FAM210AQ96ND0 272 aa12.96□□□□□ -0.33
TTC9B-201ENST00000311308 SMIM7Q9BQ49 75 aa12.96□□□□□ -0.33
TTC9B-201ENST00000311308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.95□□□□□ -0.34
TTC9B-201ENST00000311308 IGKV2-29A2NJV5 120 aaPredicted RBP12.95□□□□□ -0.34
TTC9B-201ENST00000311308 ZNF25P17030 456 aaPredicted RBP12.95□□□□□ -0.34
TTC9B-201ENST00000311308 TMEM101Q96IK0 257 aa12.95□□□□□ -0.34
TTC9B-201ENST00000311308 FGF6P10767 208 aa12.94□□□□□ -0.34
TTC9B-201ENST00000311308 TSKUQ8WUA8 353 aa12.94□□□□□ -0.34
TTC9B-201ENST00000311308 RNF185Q96GF1 192 aa12.94□□□□□ -0.34
TTC9B-201ENST00000311308 TRBV6-5A0A0K0K1A5 114 aa12.93□□□□□ -0.34
TTC9B-201ENST00000311308 A0A1B0GUT8 65 aa12.93□□□□□ -0.34
TTC9B-201ENST00000311308 FAM231BA6NCW3 169 aa12.93□□□□□ -0.34
TTC9B-201ENST00000311308 ZNF727A8MUV8 499 aa12.93□□□□□ -0.34
TTC9B-201ENST00000311308 RAB14P61106 215 aa12.93□□□□□ -0.34
TTC9B-201ENST00000311308 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
TTC9B-201ENST00000311308 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
TTC9B-201ENST00000311308 HIGD1CA8MV81 97 aa12.92□□□□□ -0.34
TTC9B-201ENST00000311308 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
TTC9B-201ENST00000311308 LINC01551Q86U37 167 aa12.92□□□□□ -0.34
TTC9B-201ENST00000311308 OSTCQ9NRP0 149 aa12.92□□□□□ -0.34
TTC9B-201ENST00000311308 PANO1I0J062 215 aa12.91□□□□□ -0.34
TTC9B-201ENST00000311308 SLPIP03973 132 aa12.91□□□□□ -0.34
TTC9B-201ENST00000311308 RPS10P46783 165 aaKnown RBP12.91□□□□□ -0.34
TTC9B-201ENST00000311308 C15orf56Q8N910 161 aa12.91□□□□□ -0.34
TTC9B-201ENST00000311308 MRAP2Q96G30 205 aa12.91□□□□□ -0.34
TTC9B-201ENST00000311308 TMEM191AQ9H0A3 160 aa12.91□□□□□ -0.34
TTC9B-201ENST00000311308 SERTAD4-AS1Q5TG53 156 aa12.9□□□□□ -0.34
TTC9B-201ENST00000311308 OR5A1Q8NGJ0 315 aa12.9□□□□□ -0.34
TTC9B-201ENST00000311308 LRP1Q07954 4544 aaKnown RBP12.9□□□□□ -0.34
TTC9B-201ENST00000311308 HIGD2BQ4VC39 106 aa12.89□□□□□ -0.35
TTC9B-201ENST00000311308 CLLU1Q5K131 121 aa12.89□□□□□ -0.35
TTC9B-201ENST00000311308 RIGQ13278 110 aa12.88□□□□□ -0.35
TTC9B-201ENST00000311308 SPACA4Q8TDM5 124 aa12.88□□□□□ -0.35
TTC9B-201ENST00000311308 TMEM242Q9NWH2 141 aa12.88□□□□□ -0.35
TTC9B-201ENST00000311308 A0A087WYN8 130 aa12.87□□□□□ -0.35
TTC9B-201ENST00000311308 PPP1R17O96001 155 aa12.87□□□□□ -0.35
TTC9B-201ENST00000311308 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
TTC9B-201ENST00000311308 PKIGQ9Y2B9 76 aa12.87□□□□□ -0.35
TTC9B-201ENST00000311308 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
TTC9B-201ENST00000311308 GVQW2A0A096LPI5 108 aaPredicted RBP12.86□□□□□ -0.35
TTC9B-201ENST00000311308 TSHBP01222 138 aa12.86□□□□□ -0.35
TTC9B-201ENST00000311308 CHTF8P0CG12 524 aa12.86□□□□□ -0.35
TTC9B-201ENST00000311308 ESDP10768 282 aa12.86□□□□□ -0.35
TTC9B-201ENST00000311308 RAB4AP20338 218 aa12.86□□□□□ -0.35
TTC9B-201ENST00000311308 FAM74A3Q4VXF1 159 aa12.86□□□□□ -0.35
TTC9B-201ENST00000311308 TRBV27A0A0K0K1C4 114 aa12.85□□□□□ -0.35
TTC9B-201ENST00000311308 C7orf77A4D0Y5 90 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms