RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LINC00527Q9UJ94 153 aa13.43□□□□□ -0.26
SPSB4-201ENST00000310546 POM121L12Q8N7R1 296 aa13.43□□□□□ -0.26
SPSB4-201ENST00000310546 FAM110DQ8TAY7 271 aaPredicted RBP13.43□□□□□ -0.26
SPSB4-201ENST00000310546 NPFFO15130 113 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 HERVK_113P63121 156 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 IGHV3OR16-10A0A075B7F0 116 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 TRBV27A0A0K0K1C4 114 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 I3L3M4 83 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 LST1O00453 97 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 C3orf22Q8N5N4 141 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 Q8N9W7 124 aa13.42□□□□□ -0.26
SPSB4-201ENST00000310546 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
SPSB4-201ENST00000310546 SETD2Q9BYW2 2564 aaPredicted RBP13.41□□□□□ -0.26
SPSB4-201ENST00000310546 LY6G5BQ8NDX9 201 aa13.41□□□□□ -0.26
SPSB4-201ENST00000310546 DUX5Q96PT3 197 aa13.41□□□□□ -0.26
SPSB4-201ENST00000310546 LITAFQ99732 161 aa13.41□□□□□ -0.26
SPSB4-201ENST00000310546 ODF3BA8MYP8 253 aa13.4□□□□□ -0.26
SPSB4-201ENST00000310546 C11orf71Q6IPW1 123 aa13.4□□□□□ -0.26
SPSB4-201ENST00000310546 Q8N6K4 173 aa13.4□□□□□ -0.26
SPSB4-201ENST00000310546 TIMM21Q9BVV7 248 aa13.4□□□□□ -0.26
SPSB4-201ENST00000310546 HECTD1Q9ULT8 2610 aa13.4□□□□□ -0.27
SPSB4-201ENST00000310546 MED14OSP0DP75 135 aa13.4□□□□□ -0.27
SPSB4-201ENST00000310546 TEX15Q9BXT5 2789 aa13.39□□□□□ -0.27
SPSB4-201ENST00000310546 TRAV12-3A0A0B4J271 114 aa13.39□□□□□ -0.27
SPSB4-201ENST00000310546 A0A0J9YX75 114 aa13.39□□□□□ -0.27
SPSB4-201ENST00000310546 A8MZ25 164 aa13.39□□□□□ -0.27
SPSB4-201ENST00000310546 DEFB121Q5J5C9 76 aa13.39□□□□□ -0.27
SPSB4-201ENST00000310546 IGHV1-69P01742 117 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 SMCR5Q8TEV8 140 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 BPESC1Q9GZL8 116 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 ACANP16112 2415 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 ITPR2Q14571 2701 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 OVOL1O14753 267 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 UQCRQO14949 82 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 DAND5Q8N907 189 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 U3KQE9 123 aa13.38□□□□□ -0.27
SPSB4-201ENST00000310546 ZFP36P26651 326 aaKnown RBP13.37□□□□□ -0.27
SPSB4-201ENST00000310546 NDUFA12Q9UI09 145 aa13.37□□□□□ -0.27
SPSB4-201ENST00000310546 CREBBPQ92793 2442 aa13.37□□□□□ -0.27
SPSB4-201ENST00000310546 C5orf47Q569G3 176 aa13.37□□□□□ -0.27
SPSB4-201ENST00000310546 IMUPQ9GZP8 106 aa13.37□□□□□ -0.27
SPSB4-201ENST00000310546 APCP25054 2843 aa13.37□□□□□ -0.27
SPSB4-201ENST00000310546 RNASE13Q5GAN3 156 aaKnown RBP13.36□□□□□ -0.27
SPSB4-201ENST00000310546 FAM19A5Q7Z5A7 132 aaPredicted RBP13.36□□□□□ -0.27
SPSB4-201ENST00000310546 UNQ9165/PRO28630Q6UXU0 137 aa13.36□□□□□ -0.27
SPSB4-201ENST00000310546 ZNF469Q96JG9 3925 aaPredicted RBP13.36□□□□□ -0.27
SPSB4-201ENST00000310546 IGLV4-3A0A075B6K6 122 aa13.36□□□□□ -0.27
SPSB4-201ENST00000310546 TRAV41A0A0B4J266 112 aa13.36□□□□□ -0.27
SPSB4-201ENST00000310546 NXPH4O95158 308 aa13.36□□□□□ -0.27
SPSB4-201ENST00000310546 TMEM61Q8N0U2 210 aa13.35□□□□□ -0.27
SPSB4-201ENST00000310546 MAPK1IP1LQ8NDC0 245 aa13.35□□□□□ -0.27
SPSB4-201ENST00000310546 TRBV7-1A0A0A6YYK4 115 aa13.35□□□□□ -0.27
SPSB4-201ENST00000310546 C20orf203Q8NBC4 194 aa13.35□□□□□ -0.27
SPSB4-201ENST00000310546 MIAQ16674 131 aa13.34□□□□□ -0.27
SPSB4-201ENST00000310546 LINC00526Q96FQ7 95 aa13.34□□□□□ -0.27
SPSB4-201ENST00000310546 ABCA2Q9BZC7 2435 aa13.34□□□□□ -0.27
SPSB4-201ENST00000310546 MXRA5Q9NR99 2828 aa13.34□□□□□ -0.27
SPSB4-201ENST00000310546 SMIM9A6NGZ8 99 aa13.33□□□□□ -0.27
SPSB4-201ENST00000310546 J3KT08 172 aa13.33□□□□□ -0.27
SPSB4-201ENST00000310546 NSUN5P1Q3KNT7 163 aa13.33□□□□□ -0.27
SPSB4-201ENST00000310546 EDA2RQ9HAV5 297 aa13.33□□□□□ -0.27
SPSB4-201ENST00000310546 ACYP1P07311 99 aa13.33□□□□□ -0.28
SPSB4-201ENST00000310546 M0QY20 66 aa13.33□□□□□ -0.28
SPSB4-201ENST00000310546 M0R1W7 72 aa13.33□□□□□ -0.28
SPSB4-201ENST00000310546 HIST2H2BCQ6DN03 193 aa13.33□□□□□ -0.28
SPSB4-201ENST00000310546 CD28P10747 220 aa13.32□□□□□ -0.28
SPSB4-201ENST00000310546 LINC00643Q86TS7 51 aa13.32□□□□□ -0.28
SPSB4-201ENST00000310546 TRBV6-5A0A0K0K1A5 114 aa13.32□□□□□ -0.28
SPSB4-201ENST00000310546 RHOHQ15669 191 aa13.32□□□□□ -0.28
SPSB4-201ENST00000310546 TRBV12-3P01733 135 aa13.31□□□□□ -0.28
SPSB4-201ENST00000310546 SPANXDQ9BXN6 97 aa13.31□□□□□ -0.28
SPSB4-201ENST00000310546 SPANXCQ9NY87 97 aa13.31□□□□□ -0.28
SPSB4-201ENST00000310546 MYO9AB2RTY4 2548 aa13.31□□□□□ -0.28
SPSB4-201ENST00000310546 FAM19A4Q96LR4 140 aa13.31□□□□□ -0.28
SPSB4-201ENST00000310546 GCN1Q92616 2671 aaKnown RBP13.3□□□□□ -0.28
SPSB4-201ENST00000310546 IGHV1-58A0A0C4DH39 117 aa13.3□□□□□ -0.28
SPSB4-201ENST00000310546 SOCS3O14543 225 aa13.3□□□□□ -0.28
SPSB4-201ENST00000310546 MINOS1Q5TGZ0 78 aa13.3□□□□□ -0.28
SPSB4-201ENST00000310546 GAGE2AQ6NT46 116 aa13.3□□□□□ -0.28
SPSB4-201ENST00000310546 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
SPSB4-201ENST00000310546 NACAE9PAV3 2078 aa13.29□□□□□ -0.28
SPSB4-201ENST00000310546 SORL1Q92673 2214 aa13.29□□□□□ -0.28
SPSB4-201ENST00000310546 MTORP42345 2549 aa13.29□□□□□ -0.28
SPSB4-201ENST00000310546 NF1P21359 2839 aa13.29□□□□□ -0.28
SPSB4-201ENST00000310546 DAZ2Q13117 558 aaKnown RBP13.28□□□□□ -0.28
SPSB4-201ENST00000310546 DAZ4Q86SG3 579 aaKnown RBP13.28□□□□□ -0.28
SPSB4-201ENST00000310546 LRRC75A-AS1Q8N1F1 130 aa13.28□□□□□ -0.28
SPSB4-201ENST00000310546 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
SPSB4-201ENST00000310546 DAZ3Q9NR90 486 aaKnown RBP13.28□□□□□ -0.28
SPSB4-201ENST00000310546 A0A0U1RRA0 63 aa13.28□□□□□ -0.28
SPSB4-201ENST00000310546 COX7CP15954 63 aa13.27□□□□□ -0.28
SPSB4-201ENST00000310546 APRG1Q8IVJ8 170 aa13.27□□□□□ -0.28
SPSB4-201ENST00000310546 CCL19Q99731 98 aa13.27□□□□□ -0.28
SPSB4-201ENST00000310546 hADV29S1A0JD25 119 aa13.27□□□□□ -0.29
SPSB4-201ENST00000310546 IGKV3-20P01619 116 aa13.27□□□□□ -0.29
SPSB4-201ENST00000310546 VSIG2Q96IQ7 327 aa13.26□□□□□ -0.29
SPSB4-201ENST00000310546 MRPS36P82909 103 aaKnown RBP13.26□□□□□ -0.29
SPSB4-201ENST00000310546 CITED2Q99967 270 aaPredicted RBP13.26□□□□□ -0.29
SPSB4-201ENST00000310546 MINOS1-NBL1R4GNA1 71 aa13.26□□□□□ -0.29
SPSB4-201ENST00000310546 TRAV12-2A0A075B6T6 113 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms