RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 IGLV4-3A0A075B6K6 122 aa15.27■□□□□ 0.03
RELA-201ENST00000308639 ZNF22P17026 224 aaPredicted RBP15.27■□□□□ 0.03
RELA-201ENST00000308639 DSCR9P59020 149 aa15.27■□□□□ 0.03
RELA-201ENST00000308639 DLX4Q92988 240 aaPredicted RBP15.27■□□□□ 0.03
RELA-201ENST00000308639 CR1P17927 2039 aa15.27■□□□□ 0.03
RELA-201ENST00000308639 Q6ZSN1 163 aa15.26■□□□□ 0.03
RELA-201ENST00000308639 UBE2E2Q96LR5 201 aa15.26■□□□□ 0.03
RELA-201ENST00000308639 NF1P21359 2839 aa15.26■□□□□ 0.03
RELA-201ENST00000308639 TMEM223A0PJW6 202 aa15.26■□□□□ 0.03
RELA-201ENST00000308639 RHOHQ15669 191 aa15.26■□□□□ 0.03
RELA-201ENST00000308639 KHDC1LQ5JSQ8 128 aa15.26■□□□□ 0.03
RELA-201ENST00000308639 Q6YL49 198 aa15.26■□□□□ 0.03
RELA-201ENST00000308639 TMEM89A2RUT3 159 aa15.25■□□□□ 0.03
RELA-201ENST00000308639 ELANEP08246 267 aa15.25■□□□□ 0.03
RELA-201ENST00000308639 NOTCH3Q9UM47 2321 aa15.25■□□□□ 0.03
RELA-201ENST00000308639 AKAP9Q99996 3911 aa15.25■□□□□ 0.03
RELA-201ENST00000308639 EIF4EBP3O60516 100 aaPredicted RBP15.25■□□□□ 0.03
RELA-201ENST00000308639 ZFAND6Q6FIF0 208 aa15.25■□□□□ 0.03
RELA-201ENST00000308639 PRRC2AP48634 2157 aaKnown RBP15.25■□□□□ 0.03
RELA-201ENST00000308639 TRGV11A0A075B6L2 103 aa15.24■□□□□ 0.03
RELA-201ENST00000308639 PPDPFLQ8WWR9 84 aa15.24■□□□□ 0.03
RELA-201ENST00000308639 FAM104AQ969W3 186 aa15.24■□□□□ 0.03
RELA-201ENST00000308639 TMEM61Q8N0U2 210 aa15.24■□□□□ 0.03
RELA-201ENST00000308639 VCX2Q9H322 139 aa15.24■□□□□ 0.03
RELA-201ENST00000308639 SETD2Q9BYW2 2564 aaPredicted RBP15.23■□□□□ 0.03
RELA-201ENST00000308639 RHODO00212 210 aa15.23■□□□□ 0.03
RELA-201ENST00000308639 TRAV2A0A0B4J234 112 aa15.23■□□□□ 0.03
RELA-201ENST00000308639 IGHV4-31P0DP07 118 aa15.23■□□□□ 0.03
RELA-201ENST00000308639 RAX2Q96IS3 184 aa15.23■□□□□ 0.03
RELA-201ENST00000308639 CARD19Q96LW7 228 aa15.23■□□□□ 0.03
RELA-201ENST00000308639 SPXQ9BT56 116 aa15.23■□□□□ 0.03
RELA-201ENST00000308639 H7C2G1 150 aa15.22■□□□□ 0.03
RELA-201ENST00000308639 TCL1BO95988 128 aa15.22■□□□□ 0.03
RELA-201ENST00000308639 TEX29Q8N6K0 151 aa15.22■□□□□ 0.03
RELA-201ENST00000308639 H3BMM0 161 aa15.22■□□□□ 0.03
RELA-201ENST00000308639 CD28P10747 220 aa15.22■□□□□ 0.03
RELA-201ENST00000308639 UBE2D3P61077 147 aa15.22■□□□□ 0.03
RELA-201ENST00000308639 UBE2D2P62837 147 aa15.22■□□□□ 0.03
RELA-201ENST00000308639 TRAV8-3A0A0A6YYJ7 113 aa15.21■□□□□ 0.03
RELA-201ENST00000308639 A4D1N5 150 aa15.21■□□□□ 0.03
RELA-201ENST00000308639 NIPBLQ6KC79 2804 aaeCLIP15.21■□□□□ 0.03
RELA-201ENST00000308639 IGHV3-38A0A0C4DH36 116 aa15.21■□□□□ 0.03
RELA-201ENST00000308639 HERV-K104P63124 156 aa15.21■□□□□ 0.03
RELA-201ENST00000308639 C10orf126Q8N4M7 172 aa15.21■□□□□ 0.03
RELA-201ENST00000308639 FAM110AQ9BQ89 295 aa15.21■□□□□ 0.03
RELA-201ENST00000308639 NBPF19A0A087WUL8 3843 aa15.21■□□□□ 0.02
RELA-201ENST00000308639 A8MZ25 164 aa15.2■□□□□ 0.02
RELA-201ENST00000308639 J3QLI3 93 aa15.2■□□□□ 0.02
RELA-201ENST00000308639 LEPROTO15243 131 aa15.2■□□□□ 0.02
RELA-201ENST00000308639 TEN1Q86WV5 123 aa15.2■□□□□ 0.02
RELA-201ENST00000308639 FSHBP01225 129 aa15.19■□□□□ 0.02
RELA-201ENST00000308639 NHLRC4P0CG21 123 aaPredicted RBP15.19■□□□□ 0.02
RELA-201ENST00000308639 MUSTN1Q8IVN3 82 aa15.19■□□□□ 0.02
RELA-201ENST00000308639 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.18■□□□□ 0.02
RELA-201ENST00000308639 IGKV2-29A2NJV5 120 aaPredicted RBP15.18■□□□□ 0.02
RELA-201ENST00000308639 C11orf44Q8N8P7 122 aa15.17■□□□□ 0.02
RELA-201ENST00000308639 BBC3Q96PG8 261 aaPredicted RBP15.17■□□□□ 0.02
RELA-201ENST00000308639 TNFRSF18Q9Y5U5 241 aa15.17■□□□□ 0.02
RELA-201ENST00000308639 PRO1854Q9UHT4 67 aa15.17■□□□□ 0.02
RELA-201ENST00000308639 CCDC168Q8NDH2 2452 aa15.16■□□□□ 0.02
RELA-201ENST00000308639 SCGB1C2P0DMR2 95 aa15.16■□□□□ 0.02
RELA-201ENST00000308639 IGHV3-30-3P0DP02 117 aa15.16■□□□□ 0.02
RELA-201ENST00000308639 CITED1Q99966 193 aa15.16■□□□□ 0.02
RELA-201ENST00000308639 MAP6D1Q9H9H5 199 aa15.15■□□□□ 0.02
RELA-201ENST00000308639 UBR5O95071 2799 aaPredicted RBP15.15■□□□□ 0.02
RELA-201ENST00000308639 TMEM262E9PQX1 116 aa15.15■□□□□ 0.02
RELA-201ENST00000308639 RNF152Q8N8N0 203 aa15.15■□□□□ 0.02
RELA-201ENST00000308639 LINC01587Q99440 93 aa15.15■□□□□ 0.02
RELA-201ENST00000308639 C2CD3Q4AC94 2353 aa15.14■□□□□ 0.01
RELA-201ENST00000308639 A0A0J9YXY3 114 aa15.14■□□□□ 0.01
RELA-201ENST00000308639 M0R2P5 195 aa15.14■□□□□ 0.01
RELA-201ENST00000308639 NPC2P61916 151 aa15.14■□□□□ 0.01
RELA-201ENST00000308639 SMIM20Q8N5G0 67 aa15.14■□□□□ 0.01
RELA-201ENST00000308639 APCP25054 2843 aa15.14■□□□□ 0.01
RELA-201ENST00000308639 JMJD1CQ15652 2540 aa15.13■□□□□ 0.01
RELA-201ENST00000308639 CHCHD7Q9BUK0 85 aa15.13■□□□□ 0.01
RELA-201ENST00000308639 TIMM21Q9BVV7 248 aa15.13■□□□□ 0.01
RELA-201ENST00000308639 IGHV3OR16-12A0A075B7B8 117 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 GAGE12JA6NER3 117 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 GAGE7O76087 117 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 GAGE12FP0CL80 117 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 GAGE12GP0CL81 117 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 GAGE12IP0CL82 117 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 GAGE4Q13068 117 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 DYNLRB2Q8TF09 96 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 LINC00467Q9BRT7 94 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 TMEM263Q8WUH6 116 aaKnown RBP15.12■□□□□ 0.01
RELA-201ENST00000308639 XCL2Q9UBD3 114 aa15.12■□□□□ 0.01
RELA-201ENST00000308639 A8MWV9 139 aa15.11■□□□□ 0.01
RELA-201ENST00000308639 LYRM7Q5U5X0 104 aa15.11■□□□□ 0.01
RELA-201ENST00000308639 ITPR3Q14573 2671 aa15.11■□□□□ 0.01
RELA-201ENST00000308639 IGHV3-33P01772 117 aa15.11■□□□□ 0.01
RELA-201ENST00000308639 C11orf72Q8NBR9 251 aa15.11■□□□□ 0.01
RELA-201ENST00000308639 NDUFV3P56181 108 aaKnown RBP15.1■□□□□ 0.01
RELA-201ENST00000308639 ZNF415Q09FC8 603 aa15.1■□□□□ 0.01
RELA-201ENST00000308639 ADAMTSL4-AS1Q5T5F5 129 aa15.1■□□□□ 0.01
RELA-201ENST00000308639 Q96MF0 132 aa15.1■□□□□ 0.01
RELA-201ENST00000308639 A0A1W2PRX2 142 aa15.1■□□□□ 0.01
RELA-201ENST00000308639 SBSPONQ8IVN8 264 aa15.1■□□□□ 0.01
RELA-201ENST00000308639 PRSS2P07478 247 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms