RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GAGE12FP0CL80 117 aa8.46□□□□□ -1.06
TRIM40-205ENST00000307859 GAGE12GP0CL81 117 aa8.46□□□□□ -1.06
TRIM40-205ENST00000307859 GAGE12IP0CL82 117 aa8.46□□□□□ -1.06
TRIM40-205ENST00000307859 ANKRD39Q53RE8 183 aa8.46□□□□□ -1.06
TRIM40-205ENST00000307859 MRPL52Q86TS9 123 aaKnown RBP8.46□□□□□ -1.06
TRIM40-205ENST00000307859 HHLA3Q9XRX5 114 aa8.46□□□□□ -1.06
TRIM40-205ENST00000307859 TRGV2A0A075B6R0 118 aa8.45□□□□□ -1.06
TRIM40-205ENST00000307859 PLNP26678 52 aa8.45□□□□□ -1.06
TRIM40-205ENST00000307859 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
TRIM40-205ENST00000307859 TRBV7-3A0A075B6L6 115 aa8.44□□□□□ -1.06
TRIM40-205ENST00000307859 IGHV4-30-4P0DP06 118 aa8.44□□□□□ -1.06
TRIM40-205ENST00000307859 COX8AP10176 69 aa8.44□□□□□ -1.06
TRIM40-205ENST00000307859 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
TRIM40-205ENST00000307859 OXLD1Q5BKU9 147 aa8.44□□□□□ -1.06
TRIM40-205ENST00000307859 LINC00469Q8N7U9 141 aa8.44□□□□□ -1.06
TRIM40-205ENST00000307859 STPG4Q8N801 248 aa8.44□□□□□ -1.06
TRIM40-205ENST00000307859 SLC25A29Q8N8R3 303 aa8.44□□□□□ -1.06
TRIM40-205ENST00000307859 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
TRIM40-205ENST00000307859 PRSS29PA6NIE9 313 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 DEFB135Q30KP9 77 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 SLC25A34Q6PIV7 304 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
TRIM40-205ENST00000307859 BIRC6Q9NR09 4857 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 TRBV6-4A0A1B0GX49 114 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
TRIM40-205ENST00000307859 COTL1Q14019 142 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 PMVKQ15126 192 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
TRIM40-205ENST00000307859 SNHG12Q9BXW3 62 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 PYGO1Q9Y3Y4 419 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 CMYA5Q8N3K9 4069 aa8.43□□□□□ -1.06
TRIM40-205ENST00000307859 EREGO14944 169 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 NPSP0C0P6 89 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 FGF6P10767 208 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 EMP1P54849 157 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 KRTAP10-11P60412 298 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 UBE2D3P61077 147 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 UBE2D2P62837 147 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 ZC2HC1BQ5TFG8 222 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 PHLDA1Q8WV24 401 aaPredicted RBP8.42□□□□□ -1.06
TRIM40-205ENST00000307859 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 TP73-AS1Q9UF72 201 aa8.42□□□□□ -1.06
TRIM40-205ENST00000307859 IGHV3-38A0A0C4DH36 116 aa8.41□□□□□ -1.06
TRIM40-205ENST00000307859 A8MZ25 164 aa8.41□□□□□ -1.06
TRIM40-205ENST00000307859 M0R143 59 aa8.41□□□□□ -1.06
TRIM40-205ENST00000307859 FHL2Q14192 279 aa8.41□□□□□ -1.06
TRIM40-205ENST00000307859 LBHQ53QV2 105 aaPredicted RBP8.41□□□□□ -1.06
TRIM40-205ENST00000307859 KPRPQ5T749 579 aaPredicted RBP8.41□□□□□ -1.06
TRIM40-205ENST00000307859 DAZ4Q86SG3 579 aaKnown RBP8.41□□□□□ -1.06
TRIM40-205ENST00000307859 OR11H2Q8NH07 326 aa8.41□□□□□ -1.06
TRIM40-205ENST00000307859 CST9LQ9H4G1 147 aa8.41□□□□□ -1.06
TRIM40-205ENST00000307859 DAZ3Q9NR90 486 aaKnown RBP8.41□□□□□ -1.06
TRIM40-205ENST00000307859 IGLV4-69A0A075B6H9 119 aa8.4□□□□□ -1.06
TRIM40-205ENST00000307859 IGLV4-3A0A075B6K6 122 aa8.4□□□□□ -1.06
TRIM40-205ENST00000307859 TRGV4A0A0C4DH28 118 aa8.4□□□□□ -1.06
TRIM40-205ENST00000307859 LYRM9A8MSI8 78 aa8.4□□□□□ -1.06
TRIM40-205ENST00000307859 DLEU1O43261 78 aa8.4□□□□□ -1.06
TRIM40-205ENST00000307859 RNF183Q96D59 192 aa8.4□□□□□ -1.06
TRIM40-205ENST00000307859 IGKV2D-26A0A0A0MRZ7 120 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 MIFP14174 115 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 CRYBA4P53673 196 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 PAPPA-AS1Q5QFB9 102 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 BOD1L2Q8IYS8 172 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 Q8NAQ8 132 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 FAM104AQ969W3 186 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 SPANXA1Q9NS26 97 aa8.4□□□□□ -1.07
TRIM40-205ENST00000307859 IGHV4-28A0A0C4DH34 117 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 GAGE12JA6NER3 117 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 LINC00694P0DN24 101 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 GAGE1Q13065 139 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 GAGE4Q13068 117 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 GAGE5Q13069 117 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 GAGE13Q4V321 117 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 FAM222AQ5U5X8 452 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 OPRPNQ99935 248 aaPredicted RBP8.39□□□□□ -1.07
TRIM40-205ENST00000307859 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 UBE2D4Q9Y2X8 147 aa8.39□□□□□ -1.07
TRIM40-205ENST00000307859 C11orf86A6NJI1 115 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 DEFB130BP0DP73 79 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 DEFB130AP0DP74 79 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 NMUP48645 174 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 TCTAP57738 103 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 C2orf91Q6ZV80 131 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 AMELXQ99217 191 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 PRADC1Q9BSG0 188 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
TRIM40-205ENST00000307859 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.37□□□□□ -1.07
TRIM40-205ENST00000307859 LOC100131303A0A0U1RQF7 123 aa8.37□□□□□ -1.07
TRIM40-205ENST00000307859 IGKV2-29A2NJV5 120 aaPredicted RBP8.37□□□□□ -1.07
TRIM40-205ENST00000307859 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
TRIM40-205ENST00000307859 NFE4Q86UQ8 179 aa8.37□□□□□ -1.07
TRIM40-205ENST00000307859 PCP2Q8IVA1 136 aa8.37□□□□□ -1.07
TRIM40-205ENST00000307859 GTSF1LQ9H1H1 148 aa8.37□□□□□ -1.07
TRIM40-205ENST00000307859 SBSPONQ8IVN8 264 aa8.36□□□□□ -1.07
TRIM40-205ENST00000307859 VCX2Q9H322 139 aa8.36□□□□□ -1.07
TRIM40-205ENST00000307859 SIVA1O15304 175 aa8.36□□□□□ -1.07
TRIM40-205ENST00000307859 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
TRIM40-205ENST00000307859 CEMP1Q6PRD7 247 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms