RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 C20orf203Q8NBC4 194 aa10.8□□□□□ -0.68
TRAPPC1-201ENST00000303731 OCC1Q8TAD7 63 aa10.8□□□□□ -0.68
TRAPPC1-201ENST00000303731 KRTAP29-1A8MX34 341 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC1-201ENST00000303731 AMTP48728 403 aa10.79□□□□□ -0.68
TRAPPC1-201ENST00000303731 TEX261Q6UWH6 196 aa10.79□□□□□ -0.68
TRAPPC1-201ENST00000303731 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
TRAPPC1-201ENST00000303731 RNASE7Q9H1E1 156 aaKnown RBP10.79□□□□□ -0.68
TRAPPC1-201ENST00000303731 K7EN84 100 aa10.78□□□□□ -0.68
TRAPPC1-201ENST00000303731 Q6ZNX1 250 aa10.78□□□□□ -0.68
TRAPPC1-201ENST00000303731 NCR2O95944 276 aa10.77□□□□□ -0.69
TRAPPC1-201ENST00000303731 CNBPP62633 177 aaKnown RBP10.77□□□□□ -0.69
TRAPPC1-201ENST00000303731 FAM231DQ6ZW35 169 aa10.77□□□□□ -0.69
TRAPPC1-201ENST00000303731 IGLV4-60A0A075B6I1 120 aa10.76□□□□□ -0.69
TRAPPC1-201ENST00000303731 IGLV10-54A0A075B6I4 117 aa10.76□□□□□ -0.69
TRAPPC1-201ENST00000303731 A8MWL6 223 aa10.76□□□□□ -0.69
TRAPPC1-201ENST00000303731 GATD1Q8NB37 220 aa10.76□□□□□ -0.69
TRAPPC1-201ENST00000303731 LYPD6BQ8NI32 183 aa10.76□□□□□ -0.69
TRAPPC1-201ENST00000303731 AP5S1Q9NUS5 200 aa10.76□□□□□ -0.69
TRAPPC1-201ENST00000303731 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-201ENST00000303731 H7C423 109 aa10.75□□□□□ -0.69
TRAPPC1-201ENST00000303731 GATCO43716 136 aaKnown RBP10.75□□□□□ -0.69
TRAPPC1-201ENST00000303731 NDUFS6O75380 124 aaKnown RBP10.75□□□□□ -0.69
TRAPPC1-201ENST00000303731 CT83Q5H943 113 aa10.75□□□□□ -0.69
TRAPPC1-201ENST00000303731 GTSF1Q8WW33 167 aa10.75□□□□□ -0.69
TRAPPC1-201ENST00000303731 hDV102S1A0JD36 115 aa10.74□□□□□ -0.69
TRAPPC1-201ENST00000303731 KRTAP10-4P60372 401 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC1-201ENST00000303731 ALKAL2Q6UX46 152 aa10.74□□□□□ -0.69
TRAPPC1-201ENST00000303731 FAM210AQ96ND0 272 aa10.74□□□□□ -0.69
TRAPPC1-201ENST00000303731 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
TRAPPC1-201ENST00000303731 FOXA3P55318 350 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC1-201ENST00000303731 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
TRAPPC1-201ENST00000303731 CFAP161Q6P656 301 aa10.73□□□□□ -0.69
TRAPPC1-201ENST00000303731 BORCS7Q96B45 105 aa10.73□□□□□ -0.69
TRAPPC1-201ENST00000303731 OXTP01178 125 aa10.72□□□□□ -0.69
TRAPPC1-201ENST00000303731 APCSP02743 223 aa10.72□□□□□ -0.69
TRAPPC1-201ENST00000303731 RPL37AP61513 92 aaKnown RBP10.72□□□□□ -0.69
TRAPPC1-201ENST00000303731 SDIM1Q6ZPB5 146 aa10.72□□□□□ -0.69
TRAPPC1-201ENST00000303731 GFRA4Q9GZZ7 299 aa10.72□□□□□ -0.69
TRAPPC1-201ENST00000303731 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
TRAPPC1-201ENST00000303731 TRBV6-5A0A0K0K1A5 114 aa10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 FAM231BA6NCW3 169 aa10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 SDHAF1A6NFY7 115 aa10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 CIRBPQ14011 172 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 RNF185Q96GF1 192 aa10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 EIF5A2Q9GZV4 153 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-201ENST00000303731 I3L3M4 83 aa10.69□□□□□ -0.7
TRAPPC1-201ENST00000303731 CEBPGP53567 150 aa10.69□□□□□ -0.7
TRAPPC1-201ENST00000303731 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
TRAPPC1-201ENST00000303731 A0A1B0GUT8 65 aa10.68□□□□□ -0.7
TRAPPC1-201ENST00000303731 RNASEKQ6P5S7 137 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-201ENST00000303731 TSKUQ8WUA8 353 aa10.68□□□□□ -0.7
TRAPPC1-201ENST00000303731 GAGE12HA6NDE8 117 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 FGF6P10767 208 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 PMCHP20382 165 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 LINC01551Q86U37 167 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 TMEM101Q96IK0 257 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 BTF3L4Q96K17 158 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 TMEM191AQ9H0A3 160 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 OSTCQ9NRP0 149 aa10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 LRP1Q07954 4544 aaKnown RBP10.67□□□□□ -0.7
TRAPPC1-201ENST00000303731 hCG_2014768A0A024R1R8 64 aa10.66□□□□□ -0.7
TRAPPC1-201ENST00000303731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC1-201ENST00000303731 IGKV3OR2-268A0A0C4DH90 116 aa10.66□□□□□ -0.7
TRAPPC1-201ENST00000303731 IGKV2-29A2NJV5 120 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC1-201ENST00000303731 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
TRAPPC1-201ENST00000303731 CHCHD10Q8WYQ3 142 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC1-201ENST00000303731 ST20Q9HBF5 79 aa10.66□□□□□ -0.7
TRAPPC1-201ENST00000303731 ZNF727A8MUV8 499 aa10.65□□□□□ -0.7
TRAPPC1-201ENST00000303731 SERTAD4-AS1Q5TG53 156 aa10.65□□□□□ -0.7
TRAPPC1-201ENST00000303731 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
TRAPPC1-201ENST00000303731 OR5A1Q8NGJ0 315 aa10.65□□□□□ -0.7
TRAPPC1-201ENST00000303731 DPH3Q96FX2 82 aa10.65□□□□□ -0.7
TRAPPC1-201ENST00000303731 MRAP2Q96G30 205 aa10.65□□□□□ -0.7
TRAPPC1-201ENST00000303731 PANO1I0J062 215 aa10.64□□□□□ -0.71
TRAPPC1-201ENST00000303731 SLPIP03973 132 aa10.64□□□□□ -0.71
TRAPPC1-201ENST00000303731 RPS10P46783 165 aaKnown RBP10.64□□□□□ -0.71
TRAPPC1-201ENST00000303731 PKIGQ9Y2B9 76 aa10.64□□□□□ -0.71
TRAPPC1-201ENST00000303731 FAT3Q8TDW7 4589 aa10.63□□□□□ -0.71
TRAPPC1-201ENST00000303731 GVQW2A0A096LPI5 108 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC1-201ENST00000303731 PPP1R17O96001 155 aa10.63□□□□□ -0.71
TRAPPC1-201ENST00000303731 FAM74A3Q4VXF1 159 aa10.63□□□□□ -0.71
TRAPPC1-201ENST00000303731 SPACA4Q8TDM5 124 aa10.63□□□□□ -0.71
TRAPPC1-201ENST00000303731 PKHD1L1Q86WI1 4243 aa10.63□□□□□ -0.71
TRAPPC1-201ENST00000303731 TRBV27A0A0K0K1C4 114 aa10.62□□□□□ -0.71
TRAPPC1-201ENST00000303731 SRP19P09132 144 aaKnown RBP10.62□□□□□ -0.71
TRAPPC1-201ENST00000303731 ESDP10768 282 aa10.62□□□□□ -0.71
TRAPPC1-201ENST00000303731 A0A087WYN8 130 aa10.61□□□□□ -0.71
TRAPPC1-201ENST00000303731 TSHBP01222 138 aa10.61□□□□□ -0.71
TRAPPC1-201ENST00000303731 RAB4AP20338 218 aa10.61□□□□□ -0.71
TRAPPC1-201ENST00000303731 POLR2KP53803 58 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-201ENST00000303731 SMAGPQ0VAQ4 97 aa10.61□□□□□ -0.71
TRAPPC1-201ENST00000303731 RIGQ13278 110 aa10.61□□□□□ -0.71
TRAPPC1-201ENST00000303731 MRPL52Q86TS9 123 aaKnown RBP10.61□□□□□ -0.71
TRAPPC1-201ENST00000303731 C7orf77A4D0Y5 90 aa10.6□□□□□ -0.71
TRAPPC1-201ENST00000303731 FOXI1Q12951 378 aa10.6□□□□□ -0.71
TRAPPC1-201ENST00000303731 HIGD2BQ4VC39 106 aa10.6□□□□□ -0.71
TRAPPC1-201ENST00000303731 TMEM242Q9NWH2 141 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms