RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 NOTCH4Q99466 2003 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 FAM222AQ5U5X8 452 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 Q6ZTI0 123 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 SNURFQ9Y675 71 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 EML6Q6ZMW3 1958 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 DOCK8Q8NF50 2099 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 TNCP24821 2201 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 ZNF106Q9H2Y7 1883 aaKnown RBP7.88□□□□□ -1.15
CLIP1-201ENST00000302528 CACNA1HO95180 2353 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 TIMM17BO60830 172 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 DCANP1Q8TF63 244 aa7.88□□□□□ -1.15
CLIP1-201ENST00000302528 TRBV27A0A0K0K1C4 114 aa7.87□□□□□ -1.15
CLIP1-201ENST00000302528 Q6ZVQ6 151 aa7.87□□□□□ -1.15
CLIP1-201ENST00000302528 LYRM9A8MSI8 78 aa7.87□□□□□ -1.15
CLIP1-201ENST00000302528 FAM167A-AS1Q96KT0 104 aa7.87□□□□□ -1.15
CLIP1-201ENST00000302528 LY6LH3BQJ8 138 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 ALPK3Q96L96 1907 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 UBE2D2P62837 147 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 UNQ9165/PRO28630Q6UXU0 137 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 LINC00322Q6ZN03 302 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-201ENST00000302528 TNRC6BQ9UPQ9 1833 aaKnown RBP7.86□□□□□ -1.15
CLIP1-201ENST00000302528 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 IGLV3-1P01715 115 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 C6orf99Q4VX62 202 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 C1orf195Q5TG92 126 aa7.86□□□□□ -1.15
CLIP1-201ENST00000302528 IBA57-AS1B1ANH7 110 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 KIAA1671Q9BY89 1806 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 LINC00467Q9BRT7 94 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 U3KQA8 63 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 COL4A3Q01955 1670 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 H7C423 109 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 RETNQ9HD89 108 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 NBASA2RRP1 2371 aa7.85□□□□□ -1.15
CLIP1-201ENST00000302528 SMIM9A6NGZ8 99 aa7.84□□□□□ -1.15
CLIP1-201ENST00000302528 KMT2EQ8IZD2 1858 aa7.84□□□□□ -1.15
CLIP1-201ENST00000302528 DNAJC9-AS1A6NH13 148 aa7.84□□□□□ -1.15
CLIP1-201ENST00000302528 TP53TG3Q9ULZ0 132 aa7.84□□□□□ -1.15
CLIP1-201ENST00000302528 SPRY4Q9C004 299 aa7.84□□□□□ -1.15
CLIP1-201ENST00000302528 IGLV9-49A0A0B4J1Y8 123 aa7.84□□□□□ -1.16
CLIP1-201ENST00000302528 PRYO14603 147 aa7.84□□□□□ -1.16
CLIP1-201ENST00000302528 LINC00308Q8TCZ7 52 aa7.84□□□□□ -1.16
CLIP1-201ENST00000302528 SPATA12Q7Z6I5 190 aa7.83□□□□□ -1.16
CLIP1-201ENST00000302528 PLA2G2CQ5R387 149 aa7.83□□□□□ -1.16
CLIP1-201ENST00000302528 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
CLIP1-201ENST00000302528 RIF1Q5UIP0 2472 aaKnown RBP7.83□□□□□ -1.16
CLIP1-201ENST00000302528 MALRD1Q5VYJ5 2156 aa7.82□□□□□ -1.16
CLIP1-201ENST00000302528 TMEM223A0PJW6 202 aa7.82□□□□□ -1.16
CLIP1-201ENST00000302528 IGLV2-18A0A075B6J9 118 aa7.82□□□□□ -1.16
CLIP1-201ENST00000302528 Q8N7P7 452 aa7.82□□□□□ -1.16
CLIP1-201ENST00000302528 X6R8D5 127 aa7.82□□□□□ -1.16
CLIP1-201ENST00000302528 FAM30AQ9NZY2 134 aa7.81□□□□□ -1.16
CLIP1-201ENST00000302528 PCNX1Q96RV3 2341 aa7.81□□□□□ -1.16
CLIP1-201ENST00000302528 M0R2N4 97 aa7.81□□□□□ -1.16
CLIP1-201ENST00000302528 TRIAP1O43715 76 aa7.81□□□□□ -1.16
CLIP1-201ENST00000302528 NDUFA7O95182 113 aa7.81□□□□□ -1.16
CLIP1-201ENST00000302528 Q6ZQY7 126 aa7.81□□□□□ -1.16
CLIP1-201ENST00000302528 A6NDX4 124 aa7.81□□□□□ -1.16
CLIP1-201ENST00000302528 ODF3L1Q8IXM7 274 aa7.8□□□□□ -1.16
CLIP1-201ENST00000302528 C19orf71A6NCJ1 209 aa7.8□□□□□ -1.16
CLIP1-201ENST00000302528 DAZAP2Q15038 168 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-201ENST00000302528 C20orf173Q96LM9 149 aa7.8□□□□□ -1.16
CLIP1-201ENST00000302528 ZNF22P17026 224 aaPredicted RBP7.8□□□□□ -1.16
CLIP1-201ENST00000302528 ZGRF1Q86YA3 2104 aa7.8□□□□□ -1.16
CLIP1-201ENST00000302528 TRBV6-8A0A0A6YYG3 113 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 ADORA2A-AS1P86434 159 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 TRBV6-5A0A0K0K1A5 114 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 M0R378 163 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 FRMD6-AS1P0C7T7 363 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 NEXN-AS1Q8NBZ9 246 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 IGLV1-47P01700 117 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 ODF3Q96PU9 254 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 WFDC10AQ9H1F0 79 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 IGLV4-3A0A075B6K6 122 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 TRAV10A0A0B4J240 114 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 PIP4P1Q86T03 277 aa7.79□□□□□ -1.16
CLIP1-201ENST00000302528 TRBV30A0A0K0K1B3 111 aa7.78□□□□□ -1.16
CLIP1-201ENST00000302528 PLAC8L1A1L4L8 177 aa7.78□□□□□ -1.16
CLIP1-201ENST00000302528 ZNF80P51504 273 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-201ENST00000302528 MIFP14174 115 aa7.78□□□□□ -1.16
CLIP1-201ENST00000302528 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
CLIP1-201ENST00000302528 WNK1Q9H4A3 2382 aa7.78□□□□□ -1.16
CLIP1-201ENST00000302528 RPL37AP8A6NKH3 93 aa7.78□□□□□ -1.16
CLIP1-201ENST00000302528 E7EUB6 86 aa7.78□□□□□ -1.16
CLIP1-201ENST00000302528 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
CLIP1-201ENST00000302528 Q8N976 141 aa7.77□□□□□ -1.16
CLIP1-201ENST00000302528 SHANK1Q9Y566 2161 aa7.77□□□□□ -1.17
CLIP1-201ENST00000302528 LINC01548A6NM66 108 aa7.77□□□□□ -1.17
CLIP1-201ENST00000302528 LINC00482Q8N8I6 264 aa7.77□□□□□ -1.17
CLIP1-201ENST00000302528 NUP210Q8TEM1 1887 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-201ENST00000302528 LOC107984640A0A0U1RRK4 108 aa7.77□□□□□ -1.17
CLIP1-201ENST00000302528 LY6G6CO95867 125 aa7.77□□□□□ -1.17
CLIP1-201ENST00000302528 TNRC6AQ8NDV7 1962 aaKnown RBP7.76□□□□□ -1.17
CLIP1-201ENST00000302528 IGLV4-69A0A075B6H9 119 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 CCDC140Q96MF4 163 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 TICRRQ7Z2Z1 1910 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 POM121L12Q8N7R1 296 aa7.76□□□□□ -1.17
CLIP1-201ENST00000302528 TRBV7-6A0A0J9YX20 115 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms