RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 FAM104AQ969W3 186 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 IGHV1OR15-1A0A075B7D0 117 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 LINC00694P0DN24 101 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 C19orf54Q5BKX5 351 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 YAE1D1Q9NRH1 226 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 Q9UF83 564 aa9.57□□□□□ -0.88
TVP23A-201ENST00000299866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
TVP23A-201ENST00000299866 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
TVP23A-201ENST00000299866 SMCR5Q8TEV8 140 aa9.56□□□□□ -0.88
TVP23A-201ENST00000299866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.56□□□□□ -0.88
TVP23A-201ENST00000299866 CELSR1Q9NYQ6 3014 aa9.56□□□□□ -0.88
TVP23A-201ENST00000299866 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
TVP23A-201ENST00000299866 BPESC1Q9GZL8 116 aa9.55□□□□□ -0.88
TVP23A-201ENST00000299866 KLK5Q9Y337 293 aaPredicted RBP9.55□□□□□ -0.88
TVP23A-201ENST00000299866 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
TVP23A-201ENST00000299866 BLCAPP62952 87 aa9.55□□□□□ -0.88
TVP23A-201ENST00000299866 CITED2Q99967 270 aaPredicted RBP9.55□□□□□ -0.88
TVP23A-201ENST00000299866 USMG5Q96IX5 58 aa9.54□□□□□ -0.88
TVP23A-201ENST00000299866 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
TVP23A-201ENST00000299866 PRM2P04554 102 aa9.54□□□□□ -0.88
TVP23A-201ENST00000299866 IGHV3-38A0A0C4DH36 116 aa9.54□□□□□ -0.88
TVP23A-201ENST00000299866 A0A1W2PPR1 153 aa9.54□□□□□ -0.88
TVP23A-201ENST00000299866 PYGO1Q9Y3Y4 419 aa9.54□□□□□ -0.88
TVP23A-201ENST00000299866 C3orf22Q8N5N4 141 aa9.53□□□□□ -0.88
TVP23A-201ENST00000299866 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
TVP23A-201ENST00000299866 LMO4P61968 165 aa9.53□□□□□ -0.88
TVP23A-201ENST00000299866 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.88
TVP23A-201ENST00000299866 IGHG2P01859 326 aa9.52□□□□□ -0.88
TVP23A-201ENST00000299866 DAZ2Q13117 558 aaKnown RBP9.52□□□□□ -0.88
TVP23A-201ENST00000299866 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.88
TVP23A-201ENST00000299866 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.88
TVP23A-201ENST00000299866 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.88
TVP23A-201ENST00000299866 ATRXP46100 2492 aa9.52□□□□□ -0.89
TVP23A-201ENST00000299866 NDUFA7O95182 113 aa9.52□□□□□ -0.89
TVP23A-201ENST00000299866 ACYP1P07311 99 aa9.52□□□□□ -0.89
TVP23A-201ENST00000299866 FBXL19-AS1Q494R0 122 aa9.52□□□□□ -0.89
TVP23A-201ENST00000299866 NACAE9PAV3 2078 aa9.51□□□□□ -0.89
TVP23A-201ENST00000299866 HERVK_113P63121 156 aa9.51□□□□□ -0.89
TVP23A-201ENST00000299866 Q8N2B8 174 aa9.51□□□□□ -0.89
TVP23A-201ENST00000299866 PTPRQQ9UMZ3 2332 aa9.51□□□□□ -0.89
TVP23A-201ENST00000299866 BAALC-AS2P0C853 105 aa9.51□□□□□ -0.89
TVP23A-201ENST00000299866 CIRBPQ14011 172 aaKnown RBP9.51□□□□□ -0.89
TVP23A-201ENST00000299866 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
TVP23A-201ENST00000299866 H3BUX3 64 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 LINC00308Q8TCZ7 52 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 COL12A1Q99715 3063 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 Q9H8V8 135 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 ZNF292O60281 2723 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 COX7A2LO14548 114 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 RS1O15537 224 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 SNRPD3P62318 126 aaKnown RBP9.5□□□□□ -0.89
TVP23A-201ENST00000299866 ADORA2A-AS1P86434 159 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 LINC00467Q9BRT7 94 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
TVP23A-201ENST00000299866 Q6ZSN1 163 aa9.49□□□□□ -0.89
TVP23A-201ENST00000299866 UQCRQO14949 82 aa9.49□□□□□ -0.89
TVP23A-201ENST00000299866 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
TVP23A-201ENST00000299866 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
TVP23A-201ENST00000299866 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.49□□□□□ -0.89
TVP23A-201ENST00000299866 EDA2RQ9HAV5 297 aa9.49□□□□□ -0.89
TVP23A-201ENST00000299866 DNAJC30Q96LL9 226 aa9.48□□□□□ -0.89
TVP23A-201ENST00000299866 COX6A2Q02221 97 aa9.48□□□□□ -0.89
TVP23A-201ENST00000299866 NDUFA1O15239 70 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 TIMM17BO60830 172 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 TIRAPP58753 221 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 Q9HAA7 133 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 IGHV4-38-2P0DP08 117 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 MAP1AP78559 2803 aaPredicted RBP9.47□□□□□ -0.89
TVP23A-201ENST00000299866 RBMY1A1P0DJD3 496 aaKnown RBP9.47□□□□□ -0.89
TVP23A-201ENST00000299866 RBMY1CP0DJD4 496 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 HOXD3P31249 432 aaPredicted RBP9.47□□□□□ -0.89
TVP23A-201ENST00000299866 RBMY1FQ15415 496 aaKnown RBP9.47□□□□□ -0.89
TVP23A-201ENST00000299866 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 NRGNQ92686 78 aa9.47□□□□□ -0.89
TVP23A-201ENST00000299866 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.89
TVP23A-201ENST00000299866 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.89
TVP23A-201ENST00000299866 SYNJ2BPP57105 145 aa9.46□□□□□ -0.9
TVP23A-201ENST00000299866 C10orf99Q6UWK7 81 aa9.46□□□□□ -0.9
TVP23A-201ENST00000299866 FAM218AQ96MZ4 157 aa9.46□□□□□ -0.9
TVP23A-201ENST00000299866 H3BUA1 57 aa9.46□□□□□ -0.9
TVP23A-201ENST00000299866 K7EMT4 169 aa9.46□□□□□ -0.9
TVP23A-201ENST00000299866 KLRB1Q12918 225 aa9.46□□□□□ -0.9
TVP23A-201ENST00000299866 CSPG4Q6UVK1 2322 aa9.46□□□□□ -0.9
TVP23A-201ENST00000299866 TRAV13-1A0A0B4J241 112 aa9.44□□□□□ -0.9
TVP23A-201ENST00000299866 K7EQG2 157 aa9.44□□□□□ -0.9
TVP23A-201ENST00000299866 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
TVP23A-201ENST00000299866 COX7CP15954 63 aa9.44□□□□□ -0.9
TVP23A-201ENST00000299866 PIK3CD-AS1Q5SR53 167 aa9.44□□□□□ -0.9
TVP23A-201ENST00000299866 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
TVP23A-201ENST00000299866 C2CD3Q4AC94 2353 aa9.43□□□□□ -0.9
TVP23A-201ENST00000299866 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
TVP23A-201ENST00000299866 PEMTQ9UBM1 199 aa9.43□□□□□ -0.9
TVP23A-201ENST00000299866 ATP5J2P56134 94 aa9.43□□□□□ -0.9
TVP23A-201ENST00000299866 LY6DQ14210 128 aa9.43□□□□□ -0.9
TVP23A-201ENST00000299866 SDIM1Q6ZPB5 146 aa9.43□□□□□ -0.9
TVP23A-201ENST00000299866 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms