RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 IGHV3-30-3P0DP02 117 aa12.88□□□□□ -0.35
CHRNA5-201ENST00000299565 Q6ZSV7 163 aa12.88□□□□□ -0.35
CHRNA5-201ENST00000299565 TEN1Q86WV5 123 aa12.88□□□□□ -0.35
CHRNA5-201ENST00000299565 H3BUA1 57 aa12.88□□□□□ -0.35
CHRNA5-201ENST00000299565 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
CHRNA5-201ENST00000299565 C11orf68Q9H3H3 251 aaKnown RBP12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 GAGE12JA6NER3 117 aa12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 UBE2L6O14933 153 aa12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 ZNF22P17026 224 aaPredicted RBP12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 GAGE4Q13068 117 aa12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 GAGE5Q13069 117 aa12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 ZNF415Q09FC8 603 aa12.87□□□□□ -0.35
CHRNA5-201ENST00000299565 RPL35AP18077 110 aaKnown RBP12.86□□□□□ -0.35
CHRNA5-201ENST00000299565 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
CHRNA5-201ENST00000299565 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
CHRNA5-201ENST00000299565 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
CHRNA5-201ENST00000299565 CLEC2BQ92478 149 aa12.86□□□□□ -0.35
CHRNA5-201ENST00000299565 K7EQG2 157 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 LEPROTO15243 131 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 GAGE2BQ13066 116 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 CFAP126Q5VTH2 177 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 NF1P21359 2839 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 CELSR2Q9HCU4 2923 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 ATXN8Q156A1 80 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 TRBV27A0A0K0K1C4 114 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 ZFAND6Q6FIF0 208 aa12.85□□□□□ -0.35
CHRNA5-201ENST00000299565 FBN2P35556 2912 aa12.84□□□□□ -0.35
CHRNA5-201ENST00000299565 K7EMT4 169 aa12.84□□□□□ -0.35
CHRNA5-201ENST00000299565 PRIMA1Q86XR5 153 aa12.84□□□□□ -0.35
CHRNA5-201ENST00000299565 FLNAP21333 2647 aaKnown RBP12.84□□□□□ -0.35
CHRNA5-201ENST00000299565 LINC00315P59091 139 aa12.84□□□□□ -0.35
CHRNA5-201ENST00000299565 RHOHQ15669 191 aa12.84□□□□□ -0.35
CHRNA5-201ENST00000299565 Q6ZUT4 128 aa12.84□□□□□ -0.35
CHRNA5-201ENST00000299565 TRAV8-4A0A0B4J246 113 aa12.83□□□□□ -0.35
CHRNA5-201ENST00000299565 PEMTQ9UBM1 199 aa12.83□□□□□ -0.35
CHRNA5-201ENST00000299565 TRAV26-1A0A087WT03 109 aa12.83□□□□□ -0.36
CHRNA5-201ENST00000299565 KIF25-AS1Q9Y6Z4 181 aa12.83□□□□□ -0.36
CHRNA5-201ENST00000299565 FASNP49327 2511 aaKnown RBP12.83□□□□□ -0.36
CHRNA5-201ENST00000299565 BSNQ9UPA5 3926 aa12.83□□□□□ -0.36
CHRNA5-201ENST00000299565 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
CHRNA5-201ENST00000299565 PSMB8P28062 276 aa12.83□□□□□ -0.36
CHRNA5-201ENST00000299565 VPREB3Q9UKI3 123 aa12.83□□□□□ -0.36
CHRNA5-201ENST00000299565 A0A0J9YXY3 114 aa12.82□□□□□ -0.36
CHRNA5-201ENST00000299565 TEX49A0A1B0GTD5 131 aa12.82□□□□□ -0.36
CHRNA5-201ENST00000299565 LINC01546A6NGU7 62 aa12.82□□□□□ -0.36
CHRNA5-201ENST00000299565 PRSS47A8MTI9 375 aa12.82□□□□□ -0.36
CHRNA5-201ENST00000299565 UBE2D1P51668 147 aa12.82□□□□□ -0.36
CHRNA5-201ENST00000299565 OR13C6PQ8NH95 151 aa12.82□□□□□ -0.36
CHRNA5-201ENST00000299565 LGALS9O00182 355 aa12.81□□□□□ -0.36
CHRNA5-201ENST00000299565 XGP55808 180 aa12.81□□□□□ -0.36
CHRNA5-201ENST00000299565 Q9H8V8 135 aa12.81□□□□□ -0.36
CHRNA5-201ENST00000299565 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
CHRNA5-201ENST00000299565 TMEM262E9PQX1 116 aa12.8□□□□□ -0.36
CHRNA5-201ENST00000299565 CDKN2A-AS1Q9UH64 79 aa12.8□□□□□ -0.36
CHRNA5-201ENST00000299565 NBEAL2Q6ZNJ1 2754 aa12.8□□□□□ -0.36
CHRNA5-201ENST00000299565 TMEM223A0PJW6 202 aa12.8□□□□□ -0.36
CHRNA5-201ENST00000299565 INSP01308 110 aa12.8□□□□□ -0.36
CHRNA5-201ENST00000299565 LINC01620Q4KN68 170 aa12.8□□□□□ -0.36
CHRNA5-201ENST00000299565 IGHV3-33P01772 117 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 LINC01619G3V211 115 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 GAGE7O76087 117 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 NDUFA7O95182 113 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 RNASE1P07998 156 aaKnown RBP12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 GAGE12FP0CL80 117 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 GAGE12GP0CL81 117 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 GAGE12IP0CL82 117 aa12.79□□□□□ -0.36
CHRNA5-201ENST00000299565 CARD19Q96LW7 228 aa12.78□□□□□ -0.36
CHRNA5-201ENST00000299565 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
CHRNA5-201ENST00000299565 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
CHRNA5-201ENST00000299565 ELANEP08246 267 aa12.77□□□□□ -0.36
CHRNA5-201ENST00000299565 Q96MF0 132 aa12.77□□□□□ -0.36
CHRNA5-201ENST00000299565 H3BMM0 161 aa12.77□□□□□ -0.36
CHRNA5-201ENST00000299565 UBE2WQ96B02 151 aa12.77□□□□□ -0.36
CHRNA5-201ENST00000299565 C9orf85Q96MD7 179 aa12.77□□□□□ -0.37
CHRNA5-201ENST00000299565 CHCHD5Q9BSY4 110 aa12.77□□□□□ -0.37
CHRNA5-201ENST00000299565 CRYBA4P53673 196 aa12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 TRGV4A0A0C4DH28 118 aa12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 TRIAP1O43715 76 aa12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 PRO0461Q9UI25 63 aa12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 ITPR3Q14573 2671 aa12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 TRBV7-9A0A0J9YWB2 115 aa12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 Q6ZSN1 163 aa12.76□□□□□ -0.37
CHRNA5-201ENST00000299565 RS1O15537 224 aa12.75□□□□□ -0.37
CHRNA5-201ENST00000299565 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
CHRNA5-201ENST00000299565 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
CHRNA5-201ENST00000299565 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
CHRNA5-201ENST00000299565 B5MCH6 92 aa12.75□□□□□ -0.37
CHRNA5-201ENST00000299565 LINC00158P58513 81 aa12.75□□□□□ -0.37
CHRNA5-201ENST00000299565 NSUN5P1Q3KNT7 163 aa12.75□□□□□ -0.37
CHRNA5-201ENST00000299565 GATA3P23771 443 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms