RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 C16orf74Q96GX8 76 aa6.59□□□□□ -1.35
PDPN-201ENST00000294489 F8P00451 2351 aa6.59□□□□□ -1.36
PDPN-201ENST00000294489 CST9LQ9H4G1 147 aa6.59□□□□□ -1.36
PDPN-201ENST00000294489 TENM1Q9UKZ4 2725 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 GAGE1Q13065 139 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 Q6ZSN1 163 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 PRIMA1Q86XR5 153 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 NACAE9PAV3 2078 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
PDPN-201ENST00000294489 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 TRAV8-6A0A0B4J262 113 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 HSD52Q0P140 79 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 DAZ2Q13117 558 aaKnown RBP6.58□□□□□ -1.36
PDPN-201ENST00000294489 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
PDPN-201ENST00000294489 OR11H2Q8NH07 326 aa6.57□□□□□ -1.36
PDPN-201ENST00000294489 VCX2Q9H322 139 aa6.57□□□□□ -1.36
PDPN-201ENST00000294489 PLAC8L1A1L4L8 177 aa6.57□□□□□ -1.36
PDPN-201ENST00000294489 Q6ZTI0 123 aa6.57□□□□□ -1.36
PDPN-201ENST00000294489 NOP10Q9NPE3 64 aaKnown RBP6.57□□□□□ -1.36
PDPN-201ENST00000294489 HIGD1BQ9P298 99 aa6.57□□□□□ -1.36
PDPN-201ENST00000294489 TRAV4A0A0B4J268 109 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 HERVK_113P61574 105 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 SEC11AP67812 179 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 TTTY13Q9BZ97 58 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 CMYA5Q8N3K9 4069 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 TEP1Q99973 2627 aaKnown RBP6.56□□□□□ -1.36
PDPN-201ENST00000294489 IGLV4-69A0A075B6H9 119 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 TRBV25-1A0A075B6N4 114 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 E9PLD3 99 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 PYGO1Q9Y3Y4 419 aa6.56□□□□□ -1.36
PDPN-201ENST00000294489 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 C11orf86A6NJI1 115 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 HERV-K104P63124 156 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 ORAOV1Q8WV07 137 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 OVOL2Q9BRP0 275 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 Q9UF83 564 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 COX11Q9Y6N1 276 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 TRGV2A0A075B6R0 118 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 A6NDN8 102 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 EMP1P54849 157 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 CHAC1Q9BUX1 264 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 VWFP04275 2813 aa6.55□□□□□ -1.36
PDPN-201ENST00000294489 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 TRBV7-3A0A075B6L6 115 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 K7EQD1 137 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 RPL36AP83881 106 aaKnown RBP6.54□□□□□ -1.36
PDPN-201ENST00000294489 ZNRF2Q8NHG8 242 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 PHLDA1Q8WV24 401 aaPredicted RBP6.54□□□□□ -1.36
PDPN-201ENST00000294489 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
PDPN-201ENST00000294489 OPRPNQ99935 248 aaPredicted RBP6.54□□□□□ -1.36
PDPN-201ENST00000294489 PRADC1Q9BSG0 188 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 CRYBA4P53673 196 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 TMEM170BQ5T4T1 132 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 MAPKAPK5-AS1Q8N8E1 139 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 KIR2DL5BQ8NHK3 375 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 JMJD1CQ15652 2540 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 IGHV3-38A0A0C4DH36 116 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 MYMXA0A1B0GTQ4 84 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 GAGE12BA1L429 117 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 GAGE7O76087 117 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 GAGE12FP0CL80 117 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 GAGE12GP0CL81 117 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 GAGE12IP0CL82 117 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
PDPN-201ENST00000294489 FLNBO75369 2602 aaKnown RBP6.53□□□□□ -1.36
PDPN-201ENST00000294489 Q6ZVH6 145 aa6.53□□□□□ -1.36
PDPN-201ENST00000294489 NFE4Q86UQ8 179 aa6.53□□□□□ -1.36
PDPN-201ENST00000294489 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
PDPN-201ENST00000294489 EGFEM1PQ0D2K5 195 aa6.53□□□□□ -1.36
PDPN-201ENST00000294489 FBN1P35555 2871 aaKnown RBP6.52□□□□□ -1.36
PDPN-201ENST00000294489 A0A1B0GV72 72 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 TAX1BP3O14907 124 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 DAZ4Q86SG3 579 aaKnown RBP6.52□□□□□ -1.37
PDPN-201ENST00000294489 SLC25A29Q8N8R3 303 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 DAZ3Q9NR90 486 aaKnown RBP6.52□□□□□ -1.37
PDPN-201ENST00000294489 GCSHP23434 173 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 LINC00612Q8N6U2 182 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 DNAH3Q8TD57 4116 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.52□□□□□ -1.37
PDPN-201ENST00000294489 IGKV2-29A2NJV5 120 aaPredicted RBP6.52□□□□□ -1.37
PDPN-201ENST00000294489 SMIM9A6NGZ8 99 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 ZNF815PA8K554 130 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 TAL2Q16559 108 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 AMELXQ99217 191 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 UBE2D4Q9Y2X8 147 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
PDPN-201ENST00000294489 TRGV4A0A0C4DH28 118 aa6.51□□□□□ -1.37
PDPN-201ENST00000294489 TRBV6-4A0A1B0GX49 114 aa6.51□□□□□ -1.37
PDPN-201ENST00000294489 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
PDPN-201ENST00000294489 DGAT2L7PQ6IED9 249 aa6.51□□□□□ -1.37
PDPN-201ENST00000294489 CEMP1Q6PRD7 247 aaPredicted RBP6.51□□□□□ -1.37
PDPN-201ENST00000294489 SCGB1D4Q6XE38 83 aa6.51□□□□□ -1.37
PDPN-201ENST00000294489 X6R8D5 127 aa6.51□□□□□ -1.37
PDPN-201ENST00000294489 GAGE12JA6NER3 117 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 A8MZ25 164 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 GAGE4Q13068 117 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 GAGE5Q13069 117 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 GAGE13Q4V321 117 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 CEND1Q8N111 149 aa6.5□□□□□ -1.37
PDPN-201ENST00000294489 C3orf56Q8N813 242 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms