RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SMIM15Q7Z3B0 74 aa9.05□□□□□ -0.96
TPM1-202ENST00000288398 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
TPM1-202ENST00000288398 NTF3P20783 257 aa9.04□□□□□ -0.96
TPM1-202ENST00000288398 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
TPM1-202ENST00000288398 CFAP161Q6P656 301 aa9.04□□□□□ -0.96
TPM1-202ENST00000288398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.04□□□□□ -0.96
TPM1-202ENST00000288398 BCL2P10415 239 aa9.03□□□□□ -0.96
TPM1-202ENST00000288398 TAGLN2P37802 199 aaKnown RBP9.03□□□□□ -0.96
TPM1-202ENST00000288398 AMMECR1LQ6DCA0 310 aa9.03□□□□□ -0.96
TPM1-202ENST00000288398 KRTAP26-1Q6PEX3 210 aa9.03□□□□□ -0.96
TPM1-202ENST00000288398 C20orf203Q8NBC4 194 aa9.03□□□□□ -0.96
TPM1-202ENST00000288398 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
TPM1-202ENST00000288398 IGLV4-60A0A075B6I1 120 aa9.02□□□□□ -0.97
TPM1-202ENST00000288398 IGKV3OR2-268A0A0C4DH90 116 aa9.02□□□□□ -0.97
TPM1-202ENST00000288398 SDIM1Q6ZPB5 146 aa9.02□□□□□ -0.97
TPM1-202ENST00000288398 C9orf62Q8N4C0 152 aa9.01□□□□□ -0.97
TPM1-202ENST00000288398 RNF185Q96GF1 192 aa9.01□□□□□ -0.97
TPM1-202ENST00000288398 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
TPM1-202ENST00000288398 CTRLP40313 264 aa9□□□□□ -0.97
TPM1-202ENST00000288398 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
TPM1-202ENST00000288398 NUDT10Q8NFP7 164 aa9□□□□□ -0.97
TPM1-202ENST00000288398 NUDT11Q96G61 164 aa9□□□□□ -0.97
TPM1-202ENST00000288398 GAGE12HA6NDE8 117 aa8.99□□□□□ -0.97
TPM1-202ENST00000288398 TEX261Q6UWH6 196 aa8.99□□□□□ -0.97
TPM1-202ENST00000288398 C7orf33Q8WU49 177 aa8.99□□□□□ -0.97
TPM1-202ENST00000288398 GFRA4Q9GZZ7 299 aa8.99□□□□□ -0.97
TPM1-202ENST00000288398 TRBV20OR9-2A0A075B6H5 130 aa8.98□□□□□ -0.97
TPM1-202ENST00000288398 PANO1I0J062 215 aa8.98□□□□□ -0.97
TPM1-202ENST00000288398 NCR2O95944 276 aa8.98□□□□□ -0.97
TPM1-202ENST00000288398 APCSP02743 223 aa8.98□□□□□ -0.97
TPM1-202ENST00000288398 SLC51BQ86UW2 128 aa8.98□□□□□ -0.97
TPM1-202ENST00000288398 BORCS7Q96B45 105 aa8.98□□□□□ -0.97
TPM1-202ENST00000288398 RNASE7Q9H1E1 156 aaKnown RBP8.98□□□□□ -0.97
TPM1-202ENST00000288398 TRAV26-2A0A0B4J265 109 aa8.97□□□□□ -0.97
TPM1-202ENST00000288398 Q6ZRU5 148 aa8.97□□□□□ -0.97
TPM1-202ENST00000288398 GATD1Q8NB37 220 aa8.97□□□□□ -0.97
TPM1-202ENST00000288398 BTF3L4Q96K17 158 aa8.97□□□□□ -0.97
TPM1-202ENST00000288398 A0A087WYN8 130 aa8.96□□□□□ -0.98
TPM1-202ENST00000288398 H7C423 109 aa8.96□□□□□ -0.98
TPM1-202ENST00000288398 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
TPM1-202ENST00000288398 RPS10P46783 165 aaKnown RBP8.96□□□□□ -0.98
TPM1-202ENST00000288398 HNRNPA3P51991 378 aaKnown RBP8.96□□□□□ -0.98
TPM1-202ENST00000288398 CIRBPQ14011 172 aaKnown RBP8.96□□□□□ -0.98
TPM1-202ENST00000288398 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
TPM1-202ENST00000288398 TMEM101Q96IK0 257 aa8.96□□□□□ -0.98
TPM1-202ENST00000288398 CNFNQ9BYD5 112 aa8.96□□□□□ -0.98
TPM1-202ENST00000288398 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
TPM1-202ENST00000288398 GATCO43716 136 aaKnown RBP8.95□□□□□ -0.98
TPM1-202ENST00000288398 PMCHP20382 165 aa8.95□□□□□ -0.98
TPM1-202ENST00000288398 SPACA4Q8TDM5 124 aa8.95□□□□□ -0.98
TPM1-202ENST00000288398 CHCHD10Q8WYQ3 142 aaPredicted RBP8.95□□□□□ -0.98
TPM1-202ENST00000288398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.94□□□□□ -0.98
TPM1-202ENST00000288398 IGKV2-29A2NJV5 120 aaPredicted RBP8.94□□□□□ -0.98
TPM1-202ENST00000288398 SDHAF1A6NFY7 115 aa8.94□□□□□ -0.98
TPM1-202ENST00000288398 A8MWL6 223 aa8.94□□□□□ -0.98
TPM1-202ENST00000288398 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
TPM1-202ENST00000288398 CEBPGP53567 150 aa8.94□□□□□ -0.98
TPM1-202ENST00000288398 IFITM2Q01629 132 aa8.94□□□□□ -0.98
TPM1-202ENST00000288398 MAJINQ3KP22 176 aa8.94□□□□□ -0.98
TPM1-202ENST00000288398 OCC1Q8TAD7 63 aa8.94□□□□□ -0.98
TPM1-202ENST00000288398 RPL39LQ96EH5 51 aaKnown RBP8.94□□□□□ -0.98
TPM1-202ENST00000288398 LRP1Q07954 4544 aaKnown RBP8.94□□□□□ -0.98
TPM1-202ENST00000288398 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
TPM1-202ENST00000288398 K7EN84 100 aa8.93□□□□□ -0.98
TPM1-202ENST00000288398 FGF6P10767 208 aa8.93□□□□□ -0.98
TPM1-202ENST00000288398 ZNF25P17030 456 aaPredicted RBP8.93□□□□□ -0.98
TPM1-202ENST00000288398 COX6A2Q02221 97 aa8.93□□□□□ -0.98
TPM1-202ENST00000288398 C15orf56Q8N910 161 aa8.93□□□□□ -0.98
TPM1-202ENST00000288398 GTSF1Q8WW33 167 aa8.93□□□□□ -0.98
TPM1-202ENST00000288398 I3L3M4 83 aa8.92□□□□□ -0.98
TPM1-202ENST00000288398 SLPIP03973 132 aa8.92□□□□□ -0.98
TPM1-202ENST00000288398 BLOC1S1P78537 153 aa8.92□□□□□ -0.98
TPM1-202ENST00000288398 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
TPM1-202ENST00000288398 PLAC8Q9NZF1 115 aa8.92□□□□□ -0.98
TPM1-202ENST00000288398 TMEM250H0YL14 139 aa8.91□□□□□ -0.98
TPM1-202ENST00000288398 PHOX2AO14813 284 aa8.91□□□□□ -0.98
TPM1-202ENST00000288398 XCL1P47992 114 aa8.91□□□□□ -0.98
TPM1-202ENST00000288398 MRAP2Q96G30 205 aa8.91□□□□□ -0.98
TPM1-202ENST00000288398 ST20Q9HBF5 79 aa8.91□□□□□ -0.98
TPM1-202ENST00000288398 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
TPM1-202ENST00000288398 GVQW2A0A096LPI5 108 aaPredicted RBP8.9□□□□□ -0.98
TPM1-202ENST00000288398 SS18Q15532 418 aa8.9□□□□□ -0.98
TPM1-202ENST00000288398 STPG4Q8N801 248 aa8.9□□□□□ -0.98
TPM1-202ENST00000288398 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.99
TPM1-202ENST00000288398 FOXA3P55318 350 aaPredicted RBP8.89□□□□□ -0.99
TPM1-202ENST00000288398 CT83Q5H943 113 aa8.89□□□□□ -0.99
TPM1-202ENST00000288398 FAM231DQ6ZW35 169 aa8.89□□□□□ -0.99
TPM1-202ENST00000288398 PRSS3P2Q8NHM4 247 aa8.89□□□□□ -0.99
TPM1-202ENST00000288398 LYPD6BQ8NI32 183 aa8.89□□□□□ -0.99
TPM1-202ENST00000288398 FAM210AQ96ND0 272 aa8.89□□□□□ -0.99
TPM1-202ENST00000288398 IGHV1-58A0A0C4DH39 117 aa8.88□□□□□ -0.99
TPM1-202ENST00000288398 ZNF561-AS1K7EIQ3 104 aa8.88□□□□□ -0.99
TPM1-202ENST00000288398 CCL25O15444 150 aa8.88□□□□□ -0.99
TPM1-202ENST00000288398 SMAGPQ0VAQ4 97 aa8.88□□□□□ -0.99
TPM1-202ENST00000288398 EIF5A2Q9GZV4 153 aaKnown RBP8.88□□□□□ -0.99
TPM1-202ENST00000288398 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
TPM1-202ENST00000288398 HMCN2Q8NDA2 5059 aa8.88□□□□□ -0.99
TPM1-202ENST00000288398 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
TPM1-202ENST00000288398 TRBV6-5A0A0K0K1A5 114 aa8.87□□□□□ -0.99
TPM1-202ENST00000288398 A0A1B0GUT8 65 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms