RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TRAV10A0A0B4J240 114 aa13.22□□□□□ -0.29
PDLIM3-202ENST00000284770 PYY3Q5JQD4 70 aa13.22□□□□□ -0.29
PDLIM3-202ENST00000284770 UBE2D3P61077 147 aa13.22□□□□□ -0.29
PDLIM3-202ENST00000284770 UBE2D2P62837 147 aa13.22□□□□□ -0.29
PDLIM3-202ENST00000284770 ORMDL2Q53FV1 153 aa13.22□□□□□ -0.29
PDLIM3-202ENST00000284770 KIR2DL4Q99706 377 aa13.22□□□□□ -0.29
PDLIM3-202ENST00000284770 STAB2Q8WWQ8 2551 aa13.21□□□□□ -0.29
PDLIM3-202ENST00000284770 I3L3M4 83 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 C3orf79P0CE67 100 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 LINC00694P0DN24 101 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 JOSD1Q15040 202 aaPredicted RBP13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 H3BNG1 76 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 TSHBP01222 138 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 SMIM6P0DI80 62 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 DAZ4Q86SG3 579 aaKnown RBP13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 DAZ3Q9NR90 486 aaKnown RBP13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 HSPB8Q9UJY1 196 aa13.2□□□□□ -0.3
PDLIM3-202ENST00000284770 NUDT3O95989 172 aa13.19□□□□□ -0.3
PDLIM3-202ENST00000284770 KRTDAPP60985 99 aa13.19□□□□□ -0.3
PDLIM3-202ENST00000284770 PHLDA1Q8WV24 401 aaPredicted RBP13.19□□□□□ -0.3
PDLIM3-202ENST00000284770 IGHV3-38A0A0C4DH36 116 aa13.17□□□□□ -0.3
PDLIM3-202ENST00000284770 BTF3P20290 206 aaKnown RBP13.17□□□□□ -0.3
PDLIM3-202ENST00000284770 LINC00518Q8N0U6 118 aa13.17□□□□□ -0.3
PDLIM3-202ENST00000284770 MRPL23Q16540 153 aaKnown RBP13.17□□□□□ -0.3
PDLIM3-202ENST00000284770 ICOSQ9Y6W8 199 aa13.17□□□□□ -0.3
PDLIM3-202ENST00000284770 Q8N976 141 aa13.16□□□□□ -0.3
PDLIM3-202ENST00000284770 TOMM6Q96B49 74 aa13.16□□□□□ -0.3
PDLIM3-202ENST00000284770 C2orf66Q6UXQ4 117 aa13.15□□□□□ -0.3
PDLIM3-202ENST00000284770 ATP6V0E2Q8NHE4 81 aa13.15□□□□□ -0.3
PDLIM3-202ENST00000284770 A0A096LPF7 62 aa13.15□□□□□ -0.31
PDLIM3-202ENST00000284770 COTL1Q14019 142 aa13.15□□□□□ -0.31
PDLIM3-202ENST00000284770 SYS1-DBNDD2H3BUS1 97 aa13.14□□□□□ -0.31
PDLIM3-202ENST00000284770 CDPF1Q6NVV7 123 aa13.14□□□□□ -0.31
PDLIM3-202ENST00000284770 SH2D6Q7Z4S9 175 aa13.14□□□□□ -0.31
PDLIM3-202ENST00000284770 SPATA12Q7Z6I5 190 aa13.14□□□□□ -0.31
PDLIM3-202ENST00000284770 C12orf57Q99622 126 aa13.14□□□□□ -0.31
PDLIM3-202ENST00000284770 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
PDLIM3-202ENST00000284770 SCGB1D1O95968 90 aa13.13□□□□□ -0.31
PDLIM3-202ENST00000284770 IFI27L1Q96BM0 104 aa13.13□□□□□ -0.31
PDLIM3-202ENST00000284770 GTSF1LQ9H1H1 148 aa13.13□□□□□ -0.31
PDLIM3-202ENST00000284770 G0S2P27469 103 aa13.12□□□□□ -0.31
PDLIM3-202ENST00000284770 CYSLTR1Q9Y271 337 aa13.12□□□□□ -0.31
PDLIM3-202ENST00000284770 RPL39P62891 51 aaKnown RBP13.12□□□□□ -0.31
PDLIM3-202ENST00000284770 C20orf203Q8NBC4 194 aa13.12□□□□□ -0.31
PDLIM3-202ENST00000284770 NTM-AS1Q6ZSK4 140 aa13.11□□□□□ -0.31
PDLIM3-202ENST00000284770 LINC01549A6NIU2 74 aa13.1□□□□□ -0.31
PDLIM3-202ENST00000284770 ATP5LO75964 103 aa13.1□□□□□ -0.31
PDLIM3-202ENST00000284770 TMEM97Q5BJF2 176 aa13.1□□□□□ -0.31
PDLIM3-202ENST00000284770 PET117Q6UWS5 81 aa13.1□□□□□ -0.31
PDLIM3-202ENST00000284770 C15orf53Q8NAA6 179 aa13.1□□□□□ -0.31
PDLIM3-202ENST00000284770 CHCHD7Q9BUK0 85 aa13.1□□□□□ -0.31
PDLIM3-202ENST00000284770 IGLL5B9A064 214 aa13.09□□□□□ -0.31
PDLIM3-202ENST00000284770 SCGB3A1Q96QR1 104 aa13.09□□□□□ -0.31
PDLIM3-202ENST00000284770 TRBV6-8A0A0A6YYG3 113 aa13.09□□□□□ -0.31
PDLIM3-202ENST00000284770 IGIPA6NJ69 53 aa13.09□□□□□ -0.31
PDLIM3-202ENST00000284770 ERASQ7Z444 233 aa13.09□□□□□ -0.31
PDLIM3-202ENST00000284770 CEMP1Q6PRD7 247 aaPredicted RBP13.08□□□□□ -0.32
PDLIM3-202ENST00000284770 H0Y8G0 127 aa13.07□□□□□ -0.32
PDLIM3-202ENST00000284770 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.07□□□□□ -0.32
PDLIM3-202ENST00000284770 LINC01545Q5VT33 79 aa13.07□□□□□ -0.32
PDLIM3-202ENST00000284770 TRBV25-1A0A075B6N4 114 aa13.07□□□□□ -0.32
PDLIM3-202ENST00000284770 NUPR2A6NF83 97 aa13.06□□□□□ -0.32
PDLIM3-202ENST00000284770 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
PDLIM3-202ENST00000284770 TIMM17AQ99595 171 aa13.06□□□□□ -0.32
PDLIM3-202ENST00000284770 TIRAPP58753 221 aa13.05□□□□□ -0.32
PDLIM3-202ENST00000284770 TEX43Q6ZNM6 134 aa13.05□□□□□ -0.32
PDLIM3-202ENST00000284770 LGALS9CQ6DKI2 356 aa13.04□□□□□ -0.32
PDLIM3-202ENST00000284770 TMEM243Q9BU79 118 aa13.04□□□□□ -0.32
PDLIM3-202ENST00000284770 C20orf202A1L168 122 aa13.04□□□□□ -0.32
PDLIM3-202ENST00000284770 PRSS1P07477 247 aa13.04□□□□□ -0.32
PDLIM3-202ENST00000284770 TMEM141Q96I45 108 aa13.04□□□□□ -0.32
PDLIM3-202ENST00000284770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.03□□□□□ -0.32
PDLIM3-202ENST00000284770 IGKV2-29A2NJV5 120 aaPredicted RBP13.03□□□□□ -0.32
PDLIM3-202ENST00000284770 Q6ZN92 141 aa13.03□□□□□ -0.32
PDLIM3-202ENST00000284770 BAALCQ8WXS3 180 aa13.03□□□□□ -0.32
PDLIM3-202ENST00000284770 PMCHL2Q9BQD1 86 aa13.03□□□□□ -0.32
PDLIM3-202ENST00000284770 KLK5Q9Y337 293 aaPredicted RBP13.03□□□□□ -0.32
PDLIM3-202ENST00000284770 PYGO1Q9Y3Y4 419 aa13.03□□□□□ -0.32
PDLIM3-202ENST00000284770 ODF1Q14990 250 aa13.02□□□□□ -0.32
PDLIM3-202ENST00000284770 ESRGQ1W209 222 aa13.02□□□□□ -0.32
PDLIM3-202ENST00000284770 LELP1Q5T871 98 aa13.02□□□□□ -0.32
PDLIM3-202ENST00000284770 TRAV12-1A0A0B4J245 112 aa13.02□□□□□ -0.33
PDLIM3-202ENST00000284770 H7C423 109 aa13.02□□□□□ -0.33
PDLIM3-202ENST00000284770 FAM104AQ969W3 186 aa13.02□□□□□ -0.33
PDLIM3-202ENST00000284770 UBE2D4Q9Y2X8 147 aa13.02□□□□□ -0.33
PDLIM3-202ENST00000284770 UBE2L6O14933 153 aa13.01□□□□□ -0.33
PDLIM3-202ENST00000284770 ATOH7Q8N100 152 aa13.01□□□□□ -0.33
PDLIM3-202ENST00000284770 WWC2-AS2Q96NR7 200 aa13.01□□□□□ -0.33
PDLIM3-202ENST00000284770 CHCHD5Q9BSY4 110 aa13.01□□□□□ -0.33
PDLIM3-202ENST00000284770 OPRPNQ99935 248 aaPredicted RBP13□□□□□ -0.33
PDLIM3-202ENST00000284770 APLNQ9ULZ1 77 aa13□□□□□ -0.33
PDLIM3-202ENST00000284770 IGLV4-3A0A075B6K6 122 aa12.99□□□□□ -0.33
PDLIM3-202ENST00000284770 A0A087WX48 190 aa12.99□□□□□ -0.33
PDLIM3-202ENST00000284770 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
PDLIM3-202ENST00000284770 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
PDLIM3-202ENST00000284770 TGP01266 2768 aa12.99□□□□□ -0.33
PDLIM3-202ENST00000284770 NPSP0C0P6 89 aa12.99□□□□□ -0.33
PDLIM3-202ENST00000284770 S100A12P80511 92 aa12.99□□□□□ -0.33
PDLIM3-202ENST00000284770 TIMM21Q9BVV7 248 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms