RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 DEFB136Q30KP8 78 aa8.36□□□□□ -1.07
SIRPB1-202ENST00000279477 ZNF843Q8N446 348 aa8.36□□□□□ -1.07
SIRPB1-202ENST00000279477 KLHL30-AS1Q8NEE0 82 aa8.36□□□□□ -1.07
SIRPB1-202ENST00000279477 SNCGO76070 127 aa8.35□□□□□ -1.07
SIRPB1-202ENST00000279477 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
SIRPB1-202ENST00000279477 USP9XQ93008 2570 aaPredicted RBP8.35□□□□□ -1.07
SIRPB1-202ENST00000279477 CENPEQ02224 2701 aa8.35□□□□□ -1.07
SIRPB1-202ENST00000279477 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
SIRPB1-202ENST00000279477 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
SIRPB1-202ENST00000279477 RNF183Q96D59 192 aa8.35□□□□□ -1.07
SIRPB1-202ENST00000279477 IGHV3-30P01768 117 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 TSPEAR-AS2P59090 65 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 DEFB114Q30KQ6 69 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 NDUFA11Q86Y39 141 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 AMELXQ99217 191 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 ANKRD17O75179 2603 aaKnown RBP8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 RBMY1BA6NDE4 496 aaKnown RBP8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 RBMY1EA6NEQ0 496 aaKnown RBP8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 RBMY1DP0C7P1 496 aaKnown RBP8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 GAGE2BQ13066 116 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 C18orf65Q6ZTR6 163 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 LINC01587Q99440 93 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
SIRPB1-202ENST00000279477 HTN1P15515 57 aa8.33□□□□□ -1.08
SIRPB1-202ENST00000279477 MRPS36P82909 103 aaKnown RBP8.33□□□□□ -1.08
SIRPB1-202ENST00000279477 BEAN1Q3B7T3 259 aa8.33□□□□□ -1.08
SIRPB1-202ENST00000279477 IGHV3-53P01767 116 aa8.33□□□□□ -1.08
SIRPB1-202ENST00000279477 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
SIRPB1-202ENST00000279477 CITED1Q99966 193 aa8.33□□□□□ -1.08
SIRPB1-202ENST00000279477 PRO1854Q9UHT4 67 aa8.33□□□□□ -1.08
SIRPB1-202ENST00000279477 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.32□□□□□ -1.08
SIRPB1-202ENST00000279477 CMC4P56277 68 aaPredicted RBP8.32□□□□□ -1.08
SIRPB1-202ENST00000279477 C11orf72Q8NBR9 251 aa8.32□□□□□ -1.08
SIRPB1-202ENST00000279477 DEFB104AQ8WTQ1 72 aa8.32□□□□□ -1.08
SIRPB1-202ENST00000279477 TIMM21Q9BVV7 248 aa8.32□□□□□ -1.08
SIRPB1-202ENST00000279477 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 RS1O15537 224 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 KRTAP10-9P60411 292 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 TTC32Q5I0X7 151 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 ANKRD29Q8N6D5 301 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 LINC01600Q96MT4 127 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 DOPEY2Q9Y3R5 2298 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 TINCRA0A1B0GVN0 87 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 GAGE12JA6NER3 117 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 SLC25A20O43772 301 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 GAGE7O76087 117 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 TCL1BO95988 128 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 GAGE12FP0CL80 117 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 GAGE12GP0CL81 117 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 GAGE12IP0CL82 117 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 GAGE4Q13068 117 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 OPRPNQ99935 248 aaPredicted RBP8.31□□□□□ -1.08
SIRPB1-202ENST00000279477 IGHV3-73A0A0B4J1V6 119 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 IFITM1P13164 125 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 FHL3Q13643 280 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 Q6ZSV7 163 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 STHQ8IWL8 128 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 ATXN8Q156A1 80 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 FAM110AQ9BQ89 295 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 UBE2D4Q9Y2X8 147 aa8.3□□□□□ -1.08
SIRPB1-202ENST00000279477 DNAJC9-AS1A6NH13 148 aa8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 CFC1P0CG37 223 aa8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 NDUFV3P56181 108 aaKnown RBP8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 IGHV1-58A0A0C4DH39 117 aa8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
SIRPB1-202ENST00000279477 ZFYVE26Q68DK2 2539 aa8.28□□□□□ -1.08
SIRPB1-202ENST00000279477 USP24Q9UPU5 2620 aa8.28□□□□□ -1.08
SIRPB1-202ENST00000279477 NACAE9PAV3 2078 aa8.28□□□□□ -1.08
SIRPB1-202ENST00000279477 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.08
SIRPB1-202ENST00000279477 PROK1P58294 105 aa8.27□□□□□ -1.08
SIRPB1-202ENST00000279477 ODF3L2Q3SX64 289 aa8.27□□□□□ -1.08
SIRPB1-202ENST00000279477 IL17DQ8TAD2 202 aa8.27□□□□□ -1.08
SIRPB1-202ENST00000279477 USP9YO00507 2555 aaPredicted RBP8.27□□□□□ -1.08
SIRPB1-202ENST00000279477 ZANQ9Y493 2812 aa8.27□□□□□ -1.08
SIRPB1-202ENST00000279477 A0A0J9YXY3 114 aa8.27□□□□□ -1.09
SIRPB1-202ENST00000279477 A4D1N5 150 aa8.27□□□□□ -1.09
SIRPB1-202ENST00000279477 CCL24O00175 119 aa8.27□□□□□ -1.09
SIRPB1-202ENST00000279477 SPANXCQ9NY87 97 aa8.27□□□□□ -1.09
SIRPB1-202ENST00000279477 FAM208BQ5VWN6 2430 aa8.27□□□□□ -1.09
SIRPB1-202ENST00000279477 B5MCH6 92 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 YAE1D1Q9NRH1 226 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 POLQO75417 2590 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 LRRK2Q5S007 2527 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 C9JAW5 83 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 TIMM17BO60830 172 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 TIRAPP58753 221 aa8.26□□□□□ -1.09
SIRPB1-202ENST00000279477 TMEM263Q8WUH6 116 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms